Gene: Os08g0490000

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os08g0490000
  • Transcript Identifier Os08t0490000-01
  • Gene Type Coding gene
  • Location chr08 : 24222565-24228352 : positive

Gene Family Information

  • ID HOM05D001526
  • #Genes/#Species 416/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os08t0490000-01
  • MSU-ID LOC_Os08g38210.1
  • MSU-ID LOC_Os08g38210.2
  • MSU-ID LOC_Os08g38210.4
  • MSU-ID LOC_Os08g38210.5
  • uniprot Q6ZBQ2

Descriptions

  • Description Helix-loop-helix DNA-binding domain containing protein.
  • Description Similar to Transcription factor BIM2.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IC
GOA Databaseregulation of transcription, DNA-templated
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0009742
ISO
PLAZA Integrative Orthologybrassinosteroid mediated signaling pathway AT5G08130
GO:1902448
ISO
PLAZA Integrative Orthologypositive regulation of shade avoidance AT5G08130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT5G08130
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G69010
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G38860
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G69010

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IC
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR044295 Transcription factor BIM1/2/3
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)