Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0010206 PREDICTED: pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Malus domestica] Chr10 + View
CSS0014235 hypothetical protein VITISV_031859 [Vitis vinifera] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G22630 LG-5 - View
Acer truncatum Atru.BG.214.p chr8 + View
Actinidia chinensis Actinidia13116 Lachesis_group0 - View
Arabidopsis lyrata AL4G33690 scaffold_4 - View
Aquilegia oxysepala Aqoxy4G03105 CHR04 - View
Aquilegia oxysepala Aqoxy2G01937 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.26WQCY PF01535 - PPR repeat (PPR) arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6NZ8WT arahy.Tifrunner.gnm1.Arahy.02 - View
Arabidopsis thaliana AT2G37310 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1)%3B Has 41005 Blast hits to 14175 proteins in 268 species: Archae - 2%3B Bacteria - 17%3B Metazoa - 83%3B Fungi - 122%3B Plants - 40263%3B Viruses - 0%3B Other Eukaryotes - 518 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT3G53360 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39530.1)%3B Has 50551 Blast hits to 14033 proteins in 266 species: Archae - 0%3B Bacteria - 13%3B Metazoa - 180%3B Fungi - 93%3B Plants - 49461%3B Viruses - 0%3B Other Eukaryotes - 804 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB01g00284 ChrB01 - View
Brassica carinata BcaB02g09289 ChrB02 - View
Brassica carinata BcaC02g07515 ChrC02 - View
Brassica carinata BcaC04g19613 ChrC04 + View
Brassica carinata BcaB06g28983 ChrB06 + View
Brassica napus C08p28700 C08 + View
Brassica napus A06p00910 A06 - View
Brassica napus C04p65810 C04 - View
Brassica napus A05p08600 A05 - View
Brassica napus A04p28490 A04 - View
Brassica napus C04p10690 C04 - View
Brassica napus A10p16790 A10 - View
Brassica oleracea BolC8t50474H C8 + View
Brassica oleracea BolC4t22662H C4 - View
Brassica oleracea BolC4t28083H C4 - View
Brassica rapa BraA04t18327Z A04 - View
Brassica rapa BraA05t19828Z A05 - View
Capsicum annuum CAN.G608.24 PGAv.1.6.scaffold608 - View
Corylus avellana Haze_20684 Similar to PCMP-E49: Pentatricopeptide repeat-containing protein At2g37310 (Arabidopsis thaliana OX%3D3702) 10 - View
Corylus avellana Haze_23977 Similar to PCMP-H71: Pentatricopeptide repeat-containing protein At1g74630 (Arabidopsis thaliana OX%3D3702) 6 + View
Cardamine hirsuta CARHR132270 Pentatricopeptide repeat-containing protein Chr4 - View
Carya illinoinensis CiPaw.09G185200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr09 - View
Cucumis melo MELO3C033474.2 Pentatricopeptide repeat-containing protein chr08 + View
Capsella rubella Carub.0004s1922 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_4 - View
Cucumis sativus L. CsaV3_3G035260 Pentatricopeptide repeat-containing protein chr3 + View
Daucus carota DCAR_017708 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv35648 GWHABJS00000015 + View
Davidia involucrata Dinv35680 GWHABJS00000015 + View
Durio zibethinus Duzib093G1532 NW_019167937.1 - View
Durio zibethinus Duzib128G0523 NW_019168481.1 + View
Erigeron canadensis ECA233G0575 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA233G4784 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.A01207 Chr01 + View
Eucalyptus grandis Eucgr.K03189 Chr11 - View
Erythranthe guttata Migut.L01645 scaffold_12 + View
Eutrema salsugineum Thhalv10016362m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_10 - View
Fragaria x ananassa FAN09G3649 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-2 + View
Fragaria x ananassa FAN14G0917 PF00646//PF01535//PF13041//PF13639 - F-box domain (F-box) // PPR repeat (PPR) // PPR repeat family (PPR_2) // Ring finger domain (zf-RING_2) Fvb6-1 - View
Fragaria x ananassa FAN05G2118 PF00646//PF01535//PF13041 - F-box domain (F-box) // PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-3 - View
Fragaria x ananassa FAN02G2208 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-4 - View
Fragaria vesca FvH4_6g14840 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6 - View
Fragaria vesca FvH4_3g24230 PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb3 + View
Gossypium hirsutum Gohir.D09G155700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D09 + View
Gossypium hirsutum Gohir.A09G160100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A09 + View
Glycine max Glyma.10G047150 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Gm10 + View
Glycine max Glyma.13G135000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm13 + View
Glycine max Glyma.13G332400 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm13 - View
Gossypium raimondii Gorai.006G177200 Chr06 + View
Lupinus albus Lalb_Chr02g0153431 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Lalb_Chr02 + View
Lotus japonicus Lj5g0019104 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr5 - View
Lonicera japonica Lj1P925T43 GWHAAZE00000001 - View
Lonicera japonica Lj2C101T1 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_8_17941 Lsat_1_v8_lg_8 + View
Magnolia biondii MBI14_g31254_MAGBIO AED:0.18 Chr14 + View
Magnolia biondii MBI05_g35631_MAGBIO AED:0.16 Chr05 + View
Malus domestica MD04G1110700 Pentatricopeptide repeat (PPR) superfamily protein Chr04 + View
Manihot esculenta Manes.09G071700 Chromosome09 - View
Nelumbo nucifera Nn2g10561 chr2 + View
Nelumbo nucifera Nn2g12817 chr2 + View
Nicotiana tabacum Nitab4.5_0000643g0190 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0000643 - View
Oryza sativa ssp. japonica Os03g0816600 Similar to pentatricopeptide repeat-containing protein. chr03 + View
Oryza sativa ssp. japonica Os03g0283500 Pentatricopeptide repeat domain containing protein. chr03 - View
Petunia axillaris Peaxi162Scf00597g00079 Pentatricopeptide repeat-containing protein Peaxi162Scf00597 - View
Punica granatum PGR044G2592 NC_045134.1 + View
Prunus persica Prupe.6G245400 Pp06 + View
Populus trichocarpa Potri.016G082200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr16 - View
Phaseolus vulgaris Phvul.007G161300 Chr07 + View
Quercus lobata QL07p045871 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0468071 RcHm_v2.0_Chr3 - View
Striga asiatica SGA_v2.0_scaffold35G14184 scaffold35 - View
Salvia bowleyana SalBow4G0269 GWHASIU00000008 - View
Salvia bowleyana SalBow3G1458 GWHASIU00000006 + View
Sechium edule Sed0021103 LG04 + View
Sechium edule Sed0028213 LG05 + View
Sechium edule Sed0011490 LG03 + View
Sechium edule Sed0019936 LG02 + View
Schrenkiella parvula Sp4g19630 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch4-6 - View
Solanum pennellii Sopen10g033970 Encodes a chloroplast RNA editing factor. | ORGANELLE TRANSCRIPT PROCESSING 81 (OTP81) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch10 + View
Trochodendron aralioides TAR369G0483 group18 + View
Trochodendron aralioides TAR623G1286 group7 - View
Trochodendron aralioides TAR625G1373 group4 + View
Trochodendron aralioides TAR623G0290 group7 + View
Tarenaya hassleriana THA.LOC104805348 pentatricopeptide repeat-containing protein At2g37310 NW_010960187.1 - View
Tripterygium wilfordii TWI53G0040 NC_052244.1 + View
Tripterygium wilfordii TWI09G0701 NC_052245.1 - View
Utricularia gibba unitig_744.g24648 unitig_744 - View
Vigna mungo VMungo1383G3471 CM024070.1 + View
Vigna mungo VMungo0720G1318 CM024071.1 + View
Vitis vinifera GSVIVG01025569001 chr8 + View
Zea mays Zm00001eb012970 Zm00001e001278 Pentatricopeptide repeat-containing protein 1 - View