Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0011598 PREDICTED: rop guanine nucleotide exchange factor 12-like isoform X1 [Nicotiana tomentosiformis] Chr15 - View
CSS0028159 unnamed protein product [Coffea canephora] Chr6 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G2670 LG-10 + View
Actinidia chinensis Actinidia24742 Lachesis_group9 - View
Actinidia chinensis Actinidia21678 Lachesis_group1 - View
Arabidopsis lyrata AL1G60410 scaffold_1 - View
Amaranthus hybridus Ah.01g021610 Rop guanine nucleotide exchange factor 12 (AtRopGEF12) (Protein MATERNAL EFFECT EMBRYO ARREST 64) (Rho of plants guanine nucleotide exchange factor 12) AmaHy_arrow1_Scaffold_1 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q4G4US PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9KE65K PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7NM7T6 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT1G52240 rop guanine nucleotide exchange factor-like protein Encodes a member of KPP-like gene family%2C homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family%2C containing the novel PRONE domain (plant-specific Rop nucleotide exchanger)%2C which is exclusively active towards members of the Rop subfamily . RHO guanyl-nucleotide exchange factor 11 (ROPGEF11)%3B CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger%2C PRONE (InterPro:IPR005512)%2C Dynein light chain%2C type 1/2 (InterPro:IPR001372)%3B BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 13 (TAIR:AT3G16130.1)%3B Has 1099 Blast hits to 1098 proteins in 168 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 490%3B Fungi - 40%3B Plants - 487%3B Viruses - 0%3B Other Eukaryotes - 82 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0315G166 AmTr_v1.0_scaffold00109 + View
Brassica napus A05p33370 A05 - View
Brassica napus C03p90510 C03 - View
Brassica oleracea BolC6t35836H C6 - View
Brassica oleracea BolC6t38046H C6 - View
Brassica oleracea BolC5t33785H C5 - View
Brassica rapa BraA05t22162Z A05 - View
Beta vulgaris EL10Ac9g22027 PTHR33101//PTHR33101:SF10 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED Chr9_EL10_PGA_scaffold8 + View
Capsicum annuum CAN.G438.25 PGAv.1.6.scaffold438 + View
Cannabis sativa CANSAT56G3179 NC_044371.1 - View
Corylus avellana Haze_16365 Similar to ROPGEF12: Rop guanine nucleotide exchange factor 12 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc04_g03060 Rho guanine nucleotide exchange factor 8 chr4 - View
Citrus clementina Ciclev10027341m.g scaffold_7 - View
Ceratophyllum demersum CDE02G1915 1 + View
Carpinus fangiana Cfa002092 Cfa01 + View
Cardamine hirsuta CARHR042370 RHO guanyl-nucleotide exchange factor 11 Chr1 - View
Cardamine hirsuta CARHR074630 Rop guanine nucleotide exchange factor Chr2 + View
Carya illinoinensis CiPaw.01G236000 PTHR33101//PTHR33101:SF10//PTHR33101:SF11 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED // SUBFAMILY NOT NAMED Chr01 - View
Carya illinoinensis CiPaw.02G149000 PTHR33101//PTHR33101:SF10 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED Chr02 - View
Citrullus lanatus ClCG07G013140 Rop guanine nucleotide exchange factor 1 CG_Chr07 + View
Cucumis melo MELO3C012970.2 Rop guanine nucleotide exchange factor chr04 + View
Corchorus olitorius COL.COLO4_30433 Plant specific Rop nucleotide exchanger%2C PRONE AWUE01020729.1 + View
Chenopodium quinoa AUR62016478 ROPGEF12: Rop guanine nucleotide exchange factor 12 C_Quinoa_Scaffold_3514 + View
Chenopodium quinoa AUR62011650 ROPGEF12: Rop guanine nucleotide exchange factor 12 C_Quinoa_Scaffold_3333 + View
Capsella rubella Carub.0001s4121 PTHR33101//PTHR33101:SF10 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED scaffold_1 - View
Cucumis sativus L. CsaV3_3G025010 Rop guanine nucleotide exchange factor like chr3 - View
Daucus carota DCAR_023060 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv38025 GWHABJS00000006 + View
Durio zibethinus Duzib235G1198 NW_019167982.1 + View
Durio zibethinus Duzib160G0885 NW_019168015.1 + View
Erigeron canadensis ECA234G0507 Conyza_canadensis_scaffold:4 - View
Erigeron canadensis ECA247G0070 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.F03037 Chr06 + View
Eucalyptus grandis Eucgr.J02959 Chr10 - View
Erythranthe guttata Migut.I00943 scaffold_9 - View
Erythranthe guttata Migut.D01018 scaffold_4 - View
Eutrema salsugineum Thhalv10021916m.g PTHR33101:SF10 - RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED scaffold_13 - View
Fragaria x ananassa FAN05G2880 PTHR33101//PTHR33101:SF10 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED Fvb6-3 - View
Fragaria x ananassa FAN02G0126 PTHR33101:SF10 - RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED Fvb6-4 - View
Fragaria x ananassa FAN09G2602 PTHR33101:SF10 - RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED Fvb6-2 - View
Fragaria vesca FvH4_6g31730 PTHR33101:SF10 - RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED Fvb6 + View
Gossypium hirsutum Gohir.D05G131100 PTHR33101//PTHR33101:SF10 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED D05 + View
Gossypium hirsutum Gohir.A05G131600 PTHR33101//PTHR33101:SF10 - FAMILY NOT NAMED // RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED A05 + View
Glycine max Glyma.15G016200 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Gm15 + View
Glycine max Glyma.07G019800 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Gm07 - View
Glycine max Glyma.13G357400 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Gm13 - View
Glycine max Glyma.08G204900 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Gm08 - View
Gossypium raimondii Gorai.009G134800 Chr09 + View
Helianthus annuus HanXRQChr04g0096121 Probable RHO guanyl-nucleotide exchange factor 12 HanXRQChr04 + View
Lupinus albus Lalb_Chr14g0373241 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Lalb_Chr14 - View
Lupinus albus Lalb_Chr24g0395921 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Lalb_Chr24 + View
Lupinus albus Lalb_Chr25g0279961 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Lalb_Chr25 + View
Lotus japonicus Lj3g0003496 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) chr3 - View
Lotus japonicus Lj3g0009785 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) chr3 - View
Lonicera japonica Lj9A509T92 GWHAAZE00000009 - View
Lonicera japonica Lj5C58T15 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_1_35220 Lsat_1_v8_lg_1 + View
Lactuca sativa Lsat_1_v5_gn_5_130880 PTHR33101:SF10 - RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED Lsat_1_v8_lg_5 + View
Magnolia biondii MBI01_g07178_MAGBIO AED:0.15 Chr01 + View
Malus domestica MD17G1191500 RHO guanyl-nucleotide exchange factor 12 Chr17 - View
Manihot esculenta Manes.04G129800 Chromosome04 + View
Manihot esculenta Manes.11G038000 Chromosome11 + View
Medicago truncatula Medtr2g101830 RHO guanyl-nucleotide exchange factor chr2 - View
Nelumbo nucifera Nn2g11697 chr2 - View
Nelumbo nucifera Nn3g18072 chr3 + View
Nicotiana tabacum Nitab4.5_0001315g0180 PRONE domain Nitab4.5_0001315 - View
Petunia axillaris Peaxi162Scf00015g00037 ROP guanine nucleotide exchange factor 5 Peaxi162Scf00015 + View
Petunia axillaris Peaxi162Scf00034g00515 ROP guanine nucleotide exchange factor 5 Peaxi162Scf00034 - View
Punica granatum PGR102G2950 NC_045129.1 + View
Punica granatum PGR102G1340 NC_045129.1 + View
Prunus persica Prupe.3G067500 PTHR33101:SF10 - RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED Pp03 - View
Populus trichocarpa Potri.003G052600 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Chr03 - View
Populus trichocarpa Potri.001G183800 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Chr01 + View
Phaseolus vulgaris Phvul.010G148900 Chr10 - View
Phaseolus vulgaris Phvul.005G168700 PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Chr05 + View
Quercus lobata QL05p021788 5 - View
Rosa chinensis RcHm_v2.0_Chr2g0138921 RcHm_v2.0_Chr2 + View
Striga asiatica SGA_v2.0_scaffold4G02008 scaffold4 + View
Salvia bowleyana SalBow2G2297 GWHASIU00000007 - View
Salix brachista Sabra01G0155500 GWHAAZH00000001 - View
Sechium edule Sed0027333 LG06 + View
Sechium edule Sed0016061 LG07 - View
Sapria himalayana SHI10992 scaffold13_12996478 + View
Solanum lycopersicum Solyc12g044270.2 Rop guanine nucleotide exchange factor 9 (AHRD V3.3 *** A0A2G3BHY6_CAPCH) SL4.0ch12 + View
Solanum lycopersicum Solyc03g120650.4 GDP-mannose pyrophosphorylase SL4.0ch03 - View
Solanum lycopersicum Solyc06g066650.4 Rop guanine nucleotide exchange factor 12 (AHRD V3.3 *** A0A1U8HDV5_CAPAN) SL4.0ch06 - View
Schrenkiella parvula Sp3g14490 PTHR33101:SF10 - RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 8-RELATED ch3-1 + View
Solanum pennellii Sopen06g024920 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth. | RHO guanyl-nucleotide exchange factor 12 (ROPGEF12) | CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE | BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 11 Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400016533 Pollen-specific kinase partner protein ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400002546 Pollen-specific kinase partner protein ST4.03ch03 - View
Solanum tuberosum PGSC0003DMG400046768 Pollen-specific kinase partner protein ST4.03ch12 + View
Selenicereus undatus Hund06630 Scaffold_33676 + View
Trochodendron aralioides TAR636G0439 group1 + View
Trochodendron aralioides TAR624G0416 group9 - View
Theobroma cacao Thecc.06G092100 RHO guanyl-nucleotide exchange factor 12 Chromosome_6 + View
Trifolium pratense TPR.G37253 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI75G0305 NC_052253.1 - View
Tripterygium wilfordii TWI12G0211 NC_052243.1 + View
Vaccinium macrocarpon vmacro18889 Similar to ROPGEF12: Rop guanine nucleotide exchange factor 12 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G0535 CM024079.1 + View
Vigna mungo VMungo0331G0984 CM024078.1 + View
Vitis vinifera GSVIVG01017070001 chr9 + View