Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0039707 PREDICTED: clathrin light chain 1 [Solanum lycopersicum] Chr8 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G22100 LG-2 + View
Acer truncatum Atru.chr6.3008 chr6 - View
Actinidia chinensis Actinidia01894 Lachesis_group0 + View
Actinidia chinensis Actinidia05614 Lachesis_group20 + View
Actinidia chinensis Actinidia09862 Lachesis_group5 - View
Actinidia chinensis Actinidia11046 Lachesis_group19 - View
Arabidopsis lyrata AL3G53870 scaffold_3 - View
Aquilegia oxysepala Aqoxy1G02555 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UW7KXU PTHR10639//PTHR10639:SF7 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CHT3B6 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XDV1T5 KOG4031 - Vesicle coat protein clathrin, light chain arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT2G20760 Clathrin light chain protein Clathrin light chain protein%3B FUNCTIONS IN: structural molecule activity%3B INVOLVED IN: intracellular protein transport%2C vesicle-mediated transport%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996)%3B BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1)%3B Has 1791 Blast hits to 1279 proteins in 282 species: Archae - 0%3B Bacteria - 563%3B Metazoa - 557%3B Fungi - 96%3B Plants - 161%3B Viruses - 0%3B Other Eukaryotes - 414 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR0680G080 AmTr_v1.0_scaffold00009 - View
Brassica rapa BraA07t27791Z A07 + View
Capsicum annuum CAN.G248.18 PGAv.1.6.scaffold248 + View
Cannabis sativa CANSAT35G1798 NC_044378.1 + View
Cannabis sativa CANSAT78G1400 NC_044376.1 + View
Cicer arietinum L. Ca_18529_v3 Ca_LG6_v3 + View
Corylus avellana Haze_13143 Similar to At2g20760: Clathrin light chain 1 (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc02_g13050 Clathrin light chain 1 chr2 + View
Coffea canephora Cc05_g06890 Putative Clathrin light chain 1 chr5 - View
Citrus clementina Ciclev10015933m.g scaffold_2 + View
Citrus clementina Ciclev10018347m.g scaffold_2 - View
Carpinus fangiana Cfa000413 Cfa01 + View
Carpinus fangiana Cfa014592 Cfa06 + View
Cardamine hirsuta CARHR111430 Clathrin light chain protein Chr3 - View
Carya illinoinensis CiPaw.03G175200 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED Chr03 + View
Carya illinoinensis CiPaw.09G057200 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED Chr09 + View
Carya illinoinensis CiPaw.10G046900 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED Chr10 + View
Carya illinoinensis CiPaw.04G124900 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED Chr04 + View
Citrullus lanatus ClCG02G017550 Clathrin light chain protein LENGTH=338 CG_Chr02 + View
Cucumis melo MELO3C007298.2 Clathrin light chain chr08 - View
Cucumis melo MELO3C013605.2 Clathrin light chain chr11 + View
Carica papaya Cpa.g.sc34.141 supercontig_34 + View
Capsella rubella Carub.0003s3533 PTHR10639//PTHR10639:SF7 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN scaffold_3 - View
Cucumis sativus L. CsaV3_6G013030 Clathrin light chain chr6 - View
Daucus carota DCAR_019187 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv12920 GWHABJS00000013 + View
Davidia involucrata Dinv23658 GWHABJS00000001 - View
Durio zibethinus Duzib160G0836 NW_019168015.1 - View
Durio zibethinus Duzib235G0960 NW_019167982.1 - View
Durio zibethinus Duzib052G0660 NW_019167849.1 + View
Durio zibethinus Duzib192G0584 NW_019168037.1 + View
Erigeron canadensis ECA234G0869 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA236G1624 Conyza_canadensis_scaffold:3 - View
Erythranthe guttata Migut.M01187 scaffold_13 + View
Erythranthe guttata Migut.H01072 scaffold_8 + View
Eutrema salsugineum Thhalv10002034m.g PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED scaffold_12 - View
Fragaria x ananassa FAN25G3473 PTHR10639//PTHR10639:SF7 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN Fvb3-1 - View
Gossypium hirsutum Gohir.D10G024700 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED D10 + View
Gossypium hirsutum Gohir.A03G157500 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED A03 - View
Gossypium hirsutum Gohir.D02G180700 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED D02 - View
Glycine max Glyma.13G298200 KOG4031 - Vesicle coat protein clathrin, light chain Gm13 - View
Glycine max Glyma.12G203500 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED Gm12 + View
Glycine max Glyma.13G181500 PTHR10639//PTHR10639:SF7 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN Gm13 - View
Glycine max Glyma.13G241300 PTHR10639//PTHR10639:SF7 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN Gm13 - View
Glycine max Glyma.15G072100 PTHR10639//PTHR10639:SF7 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN Gm15 + View
Glycine max Glyma.07G195000 PTHR10639//PTHR10639:SF7 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN Gm07 + View
Gossypium raimondii Gorai.011G026000 Chr11 + View
Gossypium raimondii Gorai.005G202300 Chr05 - View
Hydrangea macrophylla Hma1.2p1_1201F.1_g266740 Hma1.2p1_1201F.1 - View
Lupinus albus Lalb_Chr03g0029351 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED Lalb_Chr03 + View
Lupinus albus Lalb_Chr01g0005321 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED Lalb_Chr01 - View
Lotus japonicus Lj4g0024126 PTHR10639//PTHR10639:SF7 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN chr4 - View
Lotus japonicus Lj3g0016603 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED chr3 - View
Lonicera japonica Lj1A1207G80 GWHAAZE00000001 - View
Lonicera japonica Lj1A726G40 GWHAAZE00000001 - View
Lonicera japonica Lj8A113T50 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_4_65600 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_4 - View
Malus domestica MD05G1316400 Clathrin light chain protein Chr05 - View
Malus domestica MD10G1296900 Clathrin light chain protein Chr10 - View
Malus domestica MD17G1243100 Clathrin light chain protein Chr17 - View
Malus domestica MD09G1250600 Clathrin light chain protein Chr09 - View
Manihot esculenta Manes.16G025400 Chromosome16 + View
Manihot esculenta Manes.17G043200 Chromosome17 + View
Medicago truncatula Medtr4g088980 clathrin light chain-like protein chr4 - View
Medicago truncatula Medtr2g013220 clathrin light chain-like protein chr2 - View
Nelumbo nucifera Nn1g06611 chr1 - View
Nelumbo nucifera Nn1g04014 chr1 + View
Nicotiana tabacum Nitab4.5_0000512g0180 Clathrin light chain Nitab4.5_0000512 - View
Nicotiana tabacum Nitab4.5_0002526g0080 Clathrin light chain Nitab4.5_0002526 - View
Olea europaea Oeu048158.1 scaffold510 - View
Petunia axillaris Peaxi162Scf00132g00523 Clathrin light chain protein Peaxi162Scf00132 - View
Punica granatum PGR142G4081 NC_045128.1 - View
Papaver somniferum PSO675G6697 NC_039358.1 + View
Papaver somniferum PSO832G4443 NC_039367.1 - View
Papaver somniferum PSO210G4916 NC_039359.1 - View
Papaver somniferum PSO541G3503 NC_039363.1 + View
Populus trichocarpa Potri.019G102000 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED Chr19 + View
Populus trichocarpa Potri.004G040100 PTHR10639//PTHR10639:SF7 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN Chr04 + View
Populus trichocarpa Potri.011G049500 PTHR10639//PTHR10639:SF7 - CLATHRIN LIGHT CHAIN // CLATHRIN LIGHT CHAIN Chr11 + View
Phaseolus vulgaris Phvul.005G104800 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED Chr05 - View
Phaseolus vulgaris Phvul.002G227200 PTHR10639:SF7 - CLATHRIN LIGHT CHAIN Chr02 + View
Quercus lobata QL08p038392 8 + View
Rosa chinensis RcHm_v2.0_Chr2g0126241 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim06G0144900 chr06 - View
Salvia bowleyana SalBow1G6650 GWHASIU00000001 - View
Salix brachista Sabra11G0034000 GWHAAZH00000011 + View
Salix brachista Sabra04G0024700 GWHAAZH00000004 + View
Salix brachista Sabra13G0114100 GWHAAZH00000013 - View
Simmondsia chinensis Sc21g0002650 GWHAASQ00000021 + View
Sechium edule Sed0006381 LG05 + View
Sapria himalayana SHI10431 scaffold10_15062905 - View
Solanum lycopersicum Solyc02g078540.4 Clathrin light chain (AHRD V3.3 *-* A0A2G3D6A8_CAPCH) SL4.0ch02 - View
Solanum lycopersicum Solyc07g054180.4 Clathrin light chain (AHRD V3.3 *** A0A2G3C0T2_CAPCH) SL4.0ch07 - View
Schrenkiella parvula Sp3g34010 PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED ch3-6 - View
Solanum pennellii Sopen07g028110 Clathrin light chain protein | FUNCTIONS IN: structural molecule activity | INVOLVED IN: intracellular protein transport, vesicle-mediated transport | LOCATED IN: plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Clathrin light chain | BEST Arabidopsis thaliana protein match is: Clathrin light chain protein Spenn-ch07 - View
Solanum pennellii Sopen02g023390 Clathrin light chain protein | FUNCTIONS IN: structural molecule activity | INVOLVED IN: intracellular protein transport, vesicle-mediated transport | LOCATED IN: plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Clathrin light chain | BEST Arabidopsis thaliana protein match is: Clathrin light chain protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400018349 Conserved gene of unknown function ST4.03ch07 + View
Solanum tuberosum PGSC0003DMG400022381 Conserved gene of unknown function ST4.03ch02 - View
Selenicereus undatus Hund23701 Scaffold_3410 + View
Trochodendron aralioides TAR629G3428 group0 + View
Trochodendron aralioides TAR624G1045 group9 - View
Theobroma cacao Thecc.02G177500 Clathrin light chain protein Chromosome_2 + View
Theobroma cacao Thecc.06G191000 Clathrin light chain protein Chromosome_6 - View
Tripterygium wilfordii TWI18G0732 NC_052241.1 + View
Tripterygium wilfordii TWI63G0045 NC_052240.1 + View
Tripterygium wilfordii TWI38G0867 NC_052252.1 - View
Utricularia gibba unitig_26.g9946 unitig_26 + View
Vaccinium macrocarpon vmacro12286 Protein of unknown function chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0540G2516 CM024075.1 + View