Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0047508 PREDICTED: transcription factor bHLH84 [Vitis vinifera] Chr4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G12850 LG-8 - View
Acer truncatum Atru.chr13.818 chr13 + View
Acer truncatum Atru.chr5.2366 chr5 - View
Actinidia chinensis Actinidia04383 Lachesis_group7 - View
Actinidia chinensis Actinidia22688 Lachesis_group28 + View
Actinidia chinensis Actinidia10191 Lachesis_group26 + View
Actinidia chinensis Actinidia34363 Lachesis_group2 + View
Actinidia chinensis Actinidia00378 Lachesis_group12 + View
Arabidopsis lyrata AL3G46540 scaffold_3 - View
Arabidopsis lyrata AL7G17570 scaffold_7 + View
Amaranthus hybridus Ah.09g231910 AmaHy_arrow1_Scaffold_9 + View
Aquilegia oxysepala Aqoxy6G02686 CHR06 - View
Aquilegia oxysepala Aqoxy5G00885 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.N69S22 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HL643V PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UV35CQ PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED arahy.Tifrunner.gnm1.Arahy.09 - View
Arabidopsis thaliana AT2G14760 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1). Chr2 - View
Amborella trichopoda ATR0208G003 AmTr_v1.0_scaffold00164 - View
Brassica carinata BcaC01g00956 ChrC01 + View
Brassica carinata BcaC04g23068 ChrC04 + View
Brassica napus A09p10500 A09 - View
Brassica napus C09p12470 C09 - View
Brassica oleracea BolC9t54140H C9 - View
Brassica rapa BraA09t36695Z A09 - View
Beta vulgaris EL10Ac8g19378 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Chr8_EL10_PGA_scaffold4 - View
Capsicum annuum CAN.G606.53 PGAv.1.6.scaffold606 + View
Cicer arietinum L. Ca_11036_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_13229_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_24355_v3 Ca_LG8_v3 + View
Cicer arietinum L. Ca_15907_v3 Ca_LG5_v3 - View
Corylus avellana Haze_10229 Similar to BHLH85: Transcription factor bHLH85 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc10_g05680 Putative uncharacterized protein chr10 + View
Coffea canephora Cc02_g19780 Putative Transcription factor bHLH85 chr2 + View
Citrus clementina Ciclev10003450m.g scaffold_5 + View
Citrus clementina Ciclev10030309m.g scaffold_8 - View
Carpinus fangiana Cfa004634 Cfa02 - View
Carya illinoinensis CiPaw.06G166000 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr06 - View
Carya illinoinensis CiPaw.07G176000 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr07 - View
Carya illinoinensis CiPaw.05G017000 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr05 + View
Citrullus lanatus ClCG10G010480 Transcription factor, putative CG_Chr10 - View
Citrullus lanatus ClCG02G006780 basic helix-loop-helix (bHLH) DNA-binding superfamily protein LENGTH=223 CG_Chr02 + View
Citrullus lanatus ClCG08G016420 Transcription factor, putative CG_Chr08 + View
Citrullus lanatus ClCG05G020540 Transcription factor, putative CG_Chr05 + View
Cucumis melo MELO3C017996.2 transcription factor bHLH84-like chr07 + View
Cucumis melo MELO3C016810.2 Transcription factor, putative chr07 - View
Cucumis melo MELO3C018516.2 transcription factor bHLH54 chr01 + View
Cucumis melo MELO3C010811.2 Transcription factor, putative chr03 + View
Carica papaya Cpa.g.sc106.57 supercontig_106 - View
Capsella rubella Carub.0003s2879 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED scaffold_3 - View
Cucumis sativus L. CsaV3_2G026190 Transcription factor chr2 - View
Cucumis sativus L. CsaV3_4G000380 transcription factor bHLH84-like chr4 - View
Cucumis sativus L. CsaV3_7G007860 transcription factor bHLH54 chr7 - View
Daucus carota DCAR_001687 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_009888 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_021955 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_029122 hypothetical protein DCARv2_Chr9 + View
Davidia involucrata Dinv44965 GWHABJS00000002 - View
Davidia involucrata Dinv42233 GWHABJS00000002 - View
Durio zibethinus Duzib116G0426 NW_019167949.1 + View
Durio zibethinus Duzib248G1195 NW_019168048.1 - View
Durio zibethinus Duzib132G1119 NW_019167915.1 + View
Erigeron canadensis ECA247G1319 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA234G0498 Conyza_canadensis_scaffold:4 - View
Erigeron canadensis ECA236G3361 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.G01234 Chr07 - View
Eucalyptus grandis Eucgr.I01069 Chr09 - View
Eucalyptus grandis Eucgr.F02259 Chr06 + View
Erythranthe guttata Migut.N02774 scaffold_14 + View
Erythranthe guttata Migut.C00492 scaffold_3 + View
Erythranthe guttata Migut.B00443 scaffold_2 + View
Erythranthe guttata Migut.N01142 scaffold_14 - View
Eutrema salsugineum Thhalv10023147m.g scaffold_11 + View
Fragaria x ananassa FAN15G2741 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2-4 - View
Fragaria x ananassa FAN27G0300 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2-1 + View
Fragaria x ananassa FAN20G2134 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2-3 + View
Fragaria x ananassa FAN24G3055 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2-2 - View
Fragaria x ananassa FAN27G1860 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2-1 - View
Fragaria x ananassa FAN15G0395 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2-4 + View
Fragaria x ananassa FAN20G1671 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2-3 + View
Fragaria x ananassa FAN24G3192 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2-2 + View
Fragaria vesca FvH4_2g33230 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2 - View
Fragaria vesca FvH4_2g04210 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Fvb2 + View
Gossypium hirsutum Gohir.D05G212400 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED D05 + View
Gossypium hirsutum Gohir.D02G204600 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED D02 - View
Gossypium hirsutum Gohir.A03G183000 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED A03 - View
Gossypium hirsutum Gohir.A06G023750 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED A06 + View
Gossypium hirsutum Gohir.D06G020850 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED D06 + View
Glycine max Glyma.14G088400 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Gm14 - View
Glycine max Glyma.20G133600 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Gm20 + View
Glycine max Glyma.06G045800 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Gm06 + View
Glycine max Glyma.04G045300 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Gm04 + View
Glycine max Glyma.10G257400 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Gm10 - View
Gossypium raimondii Gorai.010G025400 Chr10 + View
Gossypium raimondii Gorai.005G231900 Chr05 - View
Gossypium raimondii Gorai.009G219100 Chr09 + View
Hydrangea macrophylla Hma1.2p1_1773F.1_g301740 Hma1.2p1_1773F.1 + View
Lupinus albus Lalb_Chr06g0165161 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Lalb_Chr06 - View
Lupinus albus Lalb_Chr02g0145011 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Lalb_Chr02 - View
Lupinus albus Lalb_Chr21g0308091 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Lalb_Chr21 - View
Lotus japonicus Lj5g0028138 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED chr5 - View
Lotus japonicus Lj1g0017757 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED chr1 - View
Lotus japonicus Lj5g0002934 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED chr5 + View
Lonicera japonica Lj5A218T90 GWHAAZE00000005 + View
Lonicera japonica Lj4A70G35 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_7_85221 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Lsat_1_v8_lg_7 - View
Lactuca sativa Lsat_1_v5_gn_5_114241 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Lsat_1_v8_lg_5 - View
Malus domestica MD08G1086200 ROOT HAIR DEFECTIVE 6-LIKE 2 Chr08 - View
Malus domestica MD05G1098800 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr05 + View
Malus domestica MD10G1104600 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr10 + View
Malus domestica MD15G1071200 ROOT HAIR DEFECTIVE 6-LIKE 2 Chr15 - View
Manihot esculenta Manes.07G062000 Chromosome07 + View
Manihot esculenta Manes.05G181100 Chromosome05 + View
Manihot esculenta Manes.10G083200 Chromosome10 + View
Manihot esculenta Manes.18G045600 Chromosome18 + View
Medicago truncatula Medtr3g103030 transcription factor chr3 + View
Medicago truncatula Medtr1g106460 basic helix loop helix (BHLH) DNA-binding family protein chr1 - View
Medicago truncatula Medtr5g005110 transcription factor chr5 + View
Medicago truncatula Medtr1g018090 helix loop helix DNA-binding domain protein chr1 - View
Nicotiana tabacum Nitab4.5_0001105g0090 Myc-type, basic helix-loop-helix (bHLH) domain Nitab4.5_0001105 - View
Olea europaea Oeu011138.1 scaffold1422 + View
Oryza sativa ssp. japonica Os07g0588400 Root Hair Defective-Six Like (RSL) Class II family of transcription factor, Regulation of root hair development chr07 - View
Oryza sativa ssp. japonica Os03g0205300 Similar to Helix-loop-helix DNA-binding domain containing protein. chr03 - View
Petunia axillaris Peaxi162Scf00003g02730 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00003 + View
Petunia axillaris Peaxi162Scf00081g01616 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00081 + View
Petunia axillaris Peaxi162Scf00016g02842 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00016 + View
Petunia axillaris Peaxi162Scf00152g00426 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00152 + View
Punica granatum PGR042G2588 NC_045130.1 - View
Prunus persica Prupe.8G143500 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Pp08 + View
Pisum sativum Psat4g227760 Regulation of cellular nucleobase + nucleoside + nucleotide and nucleic acid metabolic process chr4LG4 - View
Pisum sativum Psat6g215040 Myc-type + basic helix-loop-helix (bHLH) domain profile. chr6LG2 - View
Papaver somniferum PSO675G0821 NC_039358.1 - View
Papaver somniferum PSO017G2458 NC_039362.1 + View
Papaver somniferum PSO170G1368 NC_039360.1 + View
Populus trichocarpa Potri.014G017100 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr14 - View
Populus trichocarpa Potri.009G089000 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr09 - View
Populus trichocarpa Potri.002G119200 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr02 - View
Populus trichocarpa Potri.001G294300 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Chr01 + View
Phaseolus vulgaris Phvul.001G026800 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Chr01 - View
Phaseolus vulgaris Phvul.002G052100 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Chr02 - View
Phaseolus vulgaris Phvul.007G044900 PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Chr07 + View
Quercus lobata QL11p030722 11 + View
Rosa chinensis RcHm_v2.0_Chr6g0253631 RcHm_v2.0_Chr6 + View
Rosa chinensis RcHm_v2.0_Chr6g0309431 RcHm_v2.0_Chr6 + View
Striga asiatica SGA_v2.0_scaffold225G43033 scaffold225 + View
Striga asiatica SGA_v2.0_scaffold32G12999 scaffold32 - View
Salvia bowleyana SalBow3G2108 GWHASIU00000006 + View
Salvia bowleyana SalBow7G2877 GWHASIU00000005 - View
Salvia bowleyana SalBow6G1303 GWHASIU00000002 + View
Salix brachista Sabra14G0010900 GWHAAZH00000014 - View
Salix brachista Sabra02G0093700 GWHAAZH00000002 - View
Salix brachista Sabra16G0184300 GWHAAZH00000016 - View
Salix brachista Sabra09G0068900 GWHAAZH00000009 - View
Simmondsia chinensis Sc15g0005730 GWHAASQ00000015 - View
Simmondsia chinensis Sc02g0007840 GWHAASQ00000002 + View
Sechium edule Sed0003665 LG13 - View
Sechium edule Sed0016645 LG13 + View
Sechium edule Sed0008565 LG07 - View
Sechium edule Sed0012203 LG05 + View
Solanum lycopersicum Solyc10g049720.2 bHLH transcription factor 156 SL4.0ch10 + View
Solanum lycopersicum Solyc04g077960.1 Transcription factor bHLH85 (AHRD V3.3 *** A0A1U8GC08_CAPAN) SL4.0ch04 - View
Solanum lycopersicum Solyc01g107140.3 Transcription factor (AHRD V3.3 *** A0A2G2V728_CAPBA) SL4.0ch01 - View
Schrenkiella parvula Sp3g27940 PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED ch3-5 - View
Solanum pennellii Sopen01g049400 basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 . Spenn-ch01 - View
Solanum pennellii Sopen04g031550 basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 . Spenn-ch04 - View
Solanum pennellii Sopen10g020610 basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 . Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400003231 Transcription factor ST4.03ch10 - View
Solanum tuberosum PGSC0003DMG400021526 Transcription factor ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400036714 Basic helix-loop-helix protein BHLH10 ST4.03ch01 - View
Selenicereus undatus Hund12590 Scaffold_33679 + View
Trochodendron aralioides TAR376G1226 group14 - View
Trochodendron aralioides TAR628G0902 group5 - View
Trochodendron aralioides TAR381G0838 group11 + View
Trochodendron aralioides TAR625G1505 group4 + View
Theobroma cacao Thecc.08G090100 Root hair defective 6-like 2 Chromosome_8 - View
Theobroma cacao Thecc.02G116000 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_2 + View
Trifolium pratense TPR.G27125 Tp57577_TGAC_v2_LG1 - View
Trifolium pratense TPR.G8316 Tp57577_TGAC_v2_LG2 - View
Trifolium pratense TPR.G3799 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI12G0910 NC_052243.1 + View
Tripterygium wilfordii TWI56G0739 NC_052242.1 - View
Tripterygium wilfordii TWI59G0365 NC_052248.1 + View
Vigna mungo VMungo1215G2202 CM024074.1 + View
Vigna mungo VMungo0720G0749 CM024071.1 - View
Vigna mungo VMungo0647G1067 CM024073.1 - View
Vitis vinifera GSVIVG01037846001 chr3 + View
Vitis vinifera GSVIVG01009357001 chr18 - View
Zea mays Zm00001eb108190 Zm00001e120945 Transcription factor bHLH85 2 - View