Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0016548 DNA binding protein, putative [Ricinus communis] Chr6 - View
CSS0027613 Methyl-CpG-binding domain-containing protein 9, putative isoform 3 [Theobroma cacao] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr11.2012 chr11 + View
Actinidia chinensis Actinidia06029 Lachesis_group11 - View
Actinidia chinensis Actinidia13514 Lachesis_group16 - View
Actinidia chinensis Actinidia15041 Lachesis_group12 + View
Avicennia marina MSTRG.7892 ScioBoG_102841_HRSCAF_103114 + View
Aquilegia oxysepala Aqoxy3G00985 CHR03 - View
Aquilegia oxysepala Aqoxy3G02993 CHR03 - View
Cicer arietinum L. Ca_04206_v3 Ca_LG2_v3 - View
Corylus avellana Haze_12169 Similar to MBD9: Methyl-CpG-binding domain-containing protein 9 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc11_g14600 Putative Methyl-CpG-binding domain-containing protein 9 chr11 + View
Citrus clementina Ciclev10030471m.g scaffold_4 - View
Carpinus fangiana Cfa009137 Cfa03 + View
Carpinus fangiana Cfa007435 Cfa03 - View
Carya illinoinensis CiPaw.03G037100 PTHR14140:SF29 - METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 Chr03 + View
Carya illinoinensis CiPaw.04G024200 PF00439//PF00628//PF01429//PF05965//PF15612 - Bromodomain (Bromodomain) // PHD-finger (PHD) // Methyl-CpG binding domain (MBD) // F/Y rich C-terminus (FYRC) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) Chr04 + View
Citrullus lanatus ClCG10G014330 Methyl-CpG-binding domain 9 CG_Chr10 - View
Cucumis melo MELO3C009946.2 methyl-CpG-binding domain-containing protein 9 chr04 - View
Cucumis sativus L. CsaV3_3G042270 methyl-CpG-binding domain-containing protein 9 chr3 + View
Daucus carota DCAR_007093 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_021679 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_031098 hypothetical protein DCARv2_Chr9 + View
Davidia involucrata Dinv15308 GWHABJS00000008 + View
Davidia involucrata Dinv35052 GWHABJS00000012 + View
Davidia involucrata Dinv24865 GWHABJS00000018 - View
Durio zibethinus Duzib147G1510 NW_019168470.1 + View
Erigeron canadensis ECA233G2073 Conyza_canadensis_scaffold:1 + View
Erythranthe guttata Migut.L01407 scaffold_12 + View
Erythranthe guttata Migut.H00129 scaffold_8 - View
Fragaria x ananassa FAN02G2799 PTHR14140//PTHR14140:SF29 - E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 Fvb6-4 + View
Fragaria vesca FvH4_6g50560 PTHR14140//PTHR14140:SF29 - E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 Fvb6 + View
Gossypium hirsutum Gohir.A09G026000 PTHR14140//PTHR14140:SF29 - E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 A09 + View
Glycine max Glyma.19G010200 PTHR14140//PTHR14140:SF29 - E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 Gm19 - View
Helianthus annuus HanXRQChr17g0569791 Putative bromodomain; FY-rich, C-terminal; Zinc finger, RING/FYVE/PHD-type; DNA-binding domain; Methyltransferase, trithorax; Zinc finger, PHD-finger; WHIM3 domain; WHIM1 domain HanXRQChr17 + View
Helianthus annuus HanXRQChr12g0368561 Putative bromodomain; Methyl-CpG DNA binding; FY-rich, C-terminal; Zinc finger, RING/FYVE/PHD-type; Methyltransferase, trithorax; Zinc finger, PHD-finger; WHIM1 domain HanXRQChr12 + View
Lonicera japonica Lj6C805G5 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_8_157680 PF00628//PF01429//PF05965//PF15612 - PHD-finger (PHD) // Methyl-CpG binding domain (MBD) // F/Y rich C-terminus (FYRC) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) Lsat_1_v8_lg_8 - View
Manihot esculenta Manes.12G029600 Chromosome12 - View
Nelumbo nucifera Nn4g22811 chr4 - View
Nelumbo nucifera Nn3g16906 chr3 - View
Nicotiana tabacum Nitab4.5_0000113g0210 Zinc finger, PHD-finger, Zinc finger, RING/FYVE/PHD-type, FY-rich, C-terminal, Zinc finger, PHD-type, conserved site, Bromodomain, Zinc finger, PHD-type, FY-rich, N-terminal, DDT domain, Zinc finger, FYVE/PHD-type, DDT domain superfamily Nitab4.5_0000113 + View
Olea europaea Oeu003445.1 scaffold1119 + View
Petunia axillaris Peaxi162Scf00338g00002 Unknown protein Peaxi162Scf00338 + View
Punica granatum PGR142G1415 NC_045128.1 + View
Prunus persica Prupe.3G283100 PTHR14140:SF29 - METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 Pp03 + View
Papaver somniferum PSO063G6215 NC_039364.1 + View
Phaseolus vulgaris Phvul.004G017600 PTHR14140:SF29 - METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 Chr04 - View
Quercus lobata QL02p076799 CM012294 - View
Quercus lobata QL03p061451 3 - View
Rosa chinensis RcHm_v2.0_Chr2g0171081 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim12G0121100 chr12 - View
Striga asiatica SGA_v2.0_scaffold165G38252 scaffold165 - View
Sechium edule Sed0022584 LG06 - View
Solanum pennellii Sopen05g001650 Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes. | methyl-CPG-binding domain 9 (MBD9) | FUNCTIONS IN: methyl-CpG binding, DNA binding | INVOLVED IN: photoperiodism, flowering, secondary shoot formation, regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site , Zinc finger, RING-type , FY-rich, C-terminal , Zinc finger, PHD-type , FY-rich, N-terminal , DNA-binding, integrase-type , Zinc finger, FYVE/PHD-type , Methyl-CpG DNA binding , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein Spenn-ch05 - View
Trochodendron aralioides TAR371G0580 group13 - View
Trochodendron aralioides TAR629G0276 group0 + View
Theobroma cacao Thecc.04G008000 Methyl-CpG-binding domain-containing protein 9 Chromosome_4 + View
Vaccinium macrocarpon vmacro16257 Similar to MBD9: Methyl-CpG-binding domain-containing protein 9 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro05815 Similar to MBD9: Methyl-CpG-binding domain-containing protein 9 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0464G0152 CM024077.1 - View
Vitis vinifera GSVIVG01020232001 chr1 - View