Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0026290 PREDICTED: uncharacterized protein LOC102600485 [Solanum tuberosum] Chr7 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G1360 LG-6 + View
Acer truncatum Atru.chr10.1664 chr10 - View
Acer truncatum Atru.chr6.2791 chr6 - View
Actinidia chinensis Actinidia11155 Lachesis_group5 - View
Actinidia chinensis Actinidia39508 Lachesis_group17 + View
Actinidia chinensis Actinidia07640 Lachesis_group6 - View
Actinidia chinensis Actinidia10957 Lachesis_group19 - View
Arabidopsis lyrata AL7G35650 scaffold_7 - View
Arabidopsis lyrata AL8G12690 scaffold_8 + View
Avicennia marina MSTRG.7409 ScioBoG_102840_HRSCAF_103099 + View
Avicennia marina MSTRG.14733 ScioBoG_18782_HRSCAF_18867 + View
Avicennia marina MSTRG.16151 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.13221 ScioBoG_17730_HRSCAF_17811 + View
Aquilegia oxysepala Aqoxy1G02060 CHR01 - View
Aquilegia oxysepala Aqoxy4G00341 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Z6BFU6 PF04852 - Protein of unknown function (DUF640) (DUF640) arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZX6GQ3 PF04852 - Protein of unknown function (DUF640) (DUF640) arahy.Tifrunner.gnm1.Arahy.10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FTJ4F1 PTHR31165//PTHR31165:SF10 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FS6JVA PF04852 - Protein of unknown function (DUF640) (DUF640) arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT4G18610 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) LIGHT SENSITIVE HYPOCOTYLS 9 (LSH9)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1)%3B Has 307 Blast hits to 307 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 14%3B Fungi - 0%3B Plants - 293%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaB07g30427 ChrB07 + View
Brassica carinata BcaC01g00552 ChrC01 + View
Brassica carinata BcaC06g34389 ChrC06 + View
Brassica carinata BcaB04g18486 ChrB04 + View
Brassica carinata BcaC03g16794 ChrC03 - View
Brassica napus C07p29170 C07 - View
Brassica napus C03p81390 C03 + View
Brassica napus A03p51440 A03 + View
Brassica napus A02p29410 A02 - View
Brassica napus A01p10630 A01 + View
Brassica napus C07p49860 C07 + View
Brassica napus A08p13910 A08 + View
Brassica napus C02p46660 C02 - View
Brassica napus C01p12570 C01 + View
Brassica oleracea BolC1t01231H C1 + View
Brassica oleracea BolC2t10720H C2 - View
Brassica oleracea BolC7t43460H C7 - View
Brassica oleracea BolC3t20402H C3 + View
Brassica rapa BraA02t07968Z A02 - View
Brassica rapa BraA03t14228Z A03 + View
Brassica rapa BraA01t01010Z A01 + View
Brassica rapa BraA08t33376Z A08 + View
Beta vulgaris EL10Ac8g20596 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr8_EL10_PGA_scaffold4 - View
Beta vulgaris EL10Ac4g08340 PTHR31165:SF9 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 7-RELATED Chr4_EL10_PGA_scaffold1 + View
Capsicum annuum CAN.G370.78 PGAv.1.6.scaffold370 - View
Cannabis sativa CANSAT64G2531 NC_044379.1 + View
Cicer arietinum L. Ca_17919_v3 Ca_LG6_v3 - View
Cicer arietinum L. Ca_00436_v3 Ca_LG1_v3 + View
Corylus avellana Haze_13374 Similar to LSH10: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_06229 Similar to LSH10: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc05_g08370 Protein of unknown function (DUF640) chr5 + View
Coffea canephora Cc02_g15000 Protein of unknown function (DUF640) chr2 + View
Citrus clementina Ciclev10016772m.g scaffold_2 + View
Citrus clementina Ciclev10016699m.g scaffold_2 + View
Carpinus fangiana Cfa000609 Cfa01 + View
Cardamine hirsuta CARHR176100 Protein of unknown function (DUF640) Chr6 + View
Cardamine hirsuta CARHR225470 Protein of unknown function (DUF640) Chr7 + View
Carya illinoinensis CiPaw.04G133000 PTHR31165:SF10 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Chr04 + View
Carya illinoinensis CiPaw.09G069900 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr09 + View
Carya illinoinensis CiPaw.10G059100 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr10 + View
Citrullus lanatus ClCG03G007680 Protein of unknown function (DUF640) LENGTH=177 CG_Chr03 - View
Citrullus lanatus ClCG02G017830 Protein of unknown function (DUF640) LENGTH=177 CG_Chr02 + View
Citrullus lanatus ClCG07G002770 Protein of unknown function (DUF640) LENGTH=177 CG_Chr07 - View
Citrullus lanatus ClCG01G023740 Protein of unknown function (DUF640) LENGTH=177 CG_Chr01 + View
Carica papaya Cpa.g.sc7.71 supercontig_7 + View
Chenopodium quinoa AUR62031210 LSH10: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 C_Quinoa_Scaffold_1829 + View
Chenopodium quinoa AUR62027680 LSH10: Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 C_Quinoa_Scaffold_1125 + View
Capsella rubella Carub.0008s0208 PTHR31165//PTHR31165:SF10 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED scaffold_8 + View
Capsella rubella Carub.0007s2261 PTHR31165//PTHR31165:SF10 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_6G050900 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like chr6 + View
Cucumis sativus L. CsaV3_1G033330 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like chr1 - View
Daucus carota DCAR_007949 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_004006 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv14991 GWHABJS00000001 - View
Davidia involucrata Dinv18701 GWHABJS00000001 - View
Davidia involucrata Dinv15431 GWHABJS00000013 + View
Davidia involucrata Dinv40677 GWHABJS00000280 + View
Davidia involucrata Dinv16772 GWHABJS00000020 - View
Durio zibethinus Duzib235G1348 NW_019167982.1 - View
Durio zibethinus Duzib160G0606 NW_019168015.1 - View
Erigeron canadensis ECA236G4983 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.K01128 Chr11 + View
Eucalyptus grandis Eucgr.A01916 Chr01 + View
Eucalyptus grandis Eucgr.D00487 Chr04 - View
Erythranthe guttata Migut.H02151 scaffold_8 - View
Erythranthe guttata Migut.M01038 scaffold_13 - View
Erythranthe guttata Migut.M00732 scaffold_13 - View
Erythranthe guttata Migut.H01433 scaffold_8 + View
Eutrema salsugineum Thhalv10027091m.g PTHR31165:SF10 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10001044m.g PTHR31165:SF10 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED scaffold_20 - View
Fragaria x ananassa FAN05G1689 PTHR31165:SF10 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Fvb6-3 - View
Fragaria x ananassa FAN25G2430 PF04852 - Protein of unknown function (DUF640) (DUF640) Fvb3-1 + View
Fragaria x ananassa FAN16G2415 PF04852 - Protein of unknown function (DUF640) (DUF640) Fvb3-3 - View
Fragaria x ananassa FAN02G2571 PTHR31165//PTHR31165:SF10 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Fvb6-4 + View
Fragaria x ananassa FAN21G1249 PF04852 - Protein of unknown function (DUF640) (DUF640) Fvb3-2 - View
Fragaria x ananassa FAN11G0590 PF04852 - Protein of unknown function (DUF640) (DUF640) Fvb3-4 + View
Fragaria x ananassa FAN09G2364 PTHR31165:SF10 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Fvb6-2 - View
Fragaria x ananassa FAN14G2964 PTHR31165:SF10 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Fvb6-1 - View
Fragaria x ananassa FAN25G2954 PTHR31165//PTHR31165:SF9 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 7-RELATED Fvb3-1 + View
Fragaria vesca FvH4_6g27400 PTHR31165//PTHR31165:SF10 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Fvb6 + View
Fragaria vesca FvH4_3g07770 PF04852 - Protein of unknown function (DUF640) (DUF640) Fvb3 - View
Gossypium hirsutum Gohir.D05G157700 PF04852 - Protein of unknown function (DUF640) (DUF640) D05 - View
Gossypium hirsutum Gohir.A05G154700 PF04852 - Protein of unknown function (DUF640) (DUF640) A05 - View
Gossypium hirsutum Gohir.D10G037700 PF04852 - Protein of unknown function (DUF640) (DUF640) D10 - View
Gossypium hirsutum Gohir.A10G037100 PF04852 - Protein of unknown function (DUF640) (DUF640) A10 - View
Glycine max Glyma.08G116100 PF04852 - Protein of unknown function (DUF640) (DUF640) Gm08 + View
Glycine max Glyma.12G128100 PTHR31165//PTHR31165:SF10 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Gm12 + View
Glycine max Glyma.06G277400 PTHR31165//PTHR31165:SF10 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Gm06 - View
Glycine max Glyma.15G082800 PF04852 - Protein of unknown function (DUF640) (DUF640) Gm15 + View
Glycine max Glyma.12G210800 PTHR31165//PTHR31165:SF10 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Gm12 + View
Glycine max Glyma.13G290600 PTHR31165//PTHR31165:SF10 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Gm13 - View
Glycine max Glyma.13G229700 PF04852 - Protein of unknown function (DUF640) (DUF640) Gm13 - View
Gossypium raimondii Gorai.009G162300 Chr09 - View
Gossypium raimondii Gorai.011G039700 Chr11 - View
Lupinus albus Lalb_Chr07g0186441 PF04852 - Protein of unknown function (DUF640) (DUF640) Lalb_Chr07 - View
Lupinus albus Lalb_Chr12g0205141 PF04852 - Protein of unknown function (DUF640) (DUF640) Lalb_Chr12 - View
Lotus japonicus Lj6g0007401 PF04852 - Protein of unknown function (DUF640) (DUF640) chr6 - View
Lotus japonicus Lj4g0014973 PF04852 - Protein of unknown function (DUF640) (DUF640) chr4 - View
Lotus japonicus Lj3g0015869 PTHR31165:SF10 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED chr3 + View
Lotus japonicus Lj3g0005871 PTHR31165//PTHR31165:SF10 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED chr3 - View
Lonicera japonica Lj8C101T13 GWHAAZE00000008 - View
Lonicera japonica Lj2P301T16 GWHAAZE00000002 + View
Lonicera japonica Lj1P681T13 GWHAAZE00000001 + View
Lonicera japonica Lj1E1192T2 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_7_24201 PF04852 - Protein of unknown function (DUF640) (DUF640) Lsat_1_v8_lg_7 + View
Magnolia biondii MBI06_g08590_MAGBIO AED:0.44 Chr06 + View
Malus domestica MD10G1279800 Protein of unknown function (DUF640) Chr10 - View
Malus domestica MD05G1300800 Protein of unknown function (DUF640) Chr05 - View
Manihot esculenta Manes.17G055900 Chromosome17 + View
Manihot esculenta Manes.16G039700 Chromosome16 + View
Medicago truncatula Medtr8g086350 DUF640 family protein chr8 + View
Medicago truncatula Medtr2g016110 DUF640 family protein chr2 + View
Medicago truncatula Medtr4g079930 DUF640 family protein chr4 + View
Nelumbo nucifera Nn1g04421 chr1 + View
Nicotiana tabacum Nitab4.5_0000605g0180 Domain of unknown function DUF640 Nitab4.5_0000605 - View
Olea europaea Oeu001083.1 scaffold1023 - View
Petunia axillaris Peaxi162Scf00469g00032 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 Peaxi162Scf00469 + View
Punica granatum PGR142G2748 NC_045128.1 - View
Punica granatum PGR031G3335 NC_045127.1 - View
Prunus persica Prupe.3G118100 Pp03 - View
Prunus persica Prupe.4G061700 PF04852 - Protein of unknown function (DUF640) (DUF640) Pp04 + View
Prunus persica Prupe.4G165300 Pp04 - View
Pisum sativum Psat7g070320 Protein of unknown function (DUF640) chr7LG7 - View
Pisum sativum Psat1g198040 Protein of unknown function (DUF640) chr1LG6 - View
Populus trichocarpa Potri.004G057300 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr04 + View
Populus trichocarpa Potri.011G066400 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr11 + View
Phaseolus vulgaris Phvul.005G095100 PTHR31165:SF10 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Chr05 - View
Phaseolus vulgaris Phvul.002G238600 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr02 + View
Phaseolus vulgaris Phvul.006G176100 PF04852 - Protein of unknown function (DUF640) (DUF640) Chr06 - View
Quercus lobata QL05p047227 5 + View
Quercus lobata QL08p041767 8 + View
Rosa chinensis RcHm_v2.0_Chr5g0010811 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim02G0143000 chr02 + View
Rhododendron simsii Rhsim06G0131100 chr06 - View
Striga asiatica SGA_v2.0_scaffold12G06113 scaffold12 - View
Striga asiatica SGA_v2.0_scaffold1G00047 scaffold1 + View
Striga asiatica SGA_v2.0_scaffold9G04824 scaffold9 - View
Salvia bowleyana SalBow8G0018 GWHASIU00000004 + View
Salvia bowleyana SalBow7G2307 GWHASIU00000005 - View
Salvia bowleyana SalBow7G1368 GWHASIU00000005 + View
Salix brachista Sabra11G0048000 GWHAAZH00000011 + View
Salix brachista Sabra04G0037100 GWHAAZH00000004 + View
Sechium edule Sed0015735 LG08 - View
Sechium edule Sed0024506 LG04 - View
Sechium edule Sed0004675 LG05 - View
Sechium edule Sed0014295 LG10 - View
Sechium edule Sed0020927 LG01 + View
Solanum lycopersicum Solyc07g150147.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 (AHRD V3.3 *** A0A2G3C166_CAPCH) SL4.0ch07 + View
Schrenkiella parvula Sp2g10790 PTHR31165//PTHR31165:SF10 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED ch2-4 - View
Schrenkiella parvula Sp7g15410 PTHR31165//PTHR31165:SF10 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED ch7-4 - View
Solanum pennellii Sopen07g027140 LIGHT SENSITIVE HYPOCOTYLS 10 (LSH10) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 | BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) Spenn-ch07 - View
Solanum pennellii Sopen02g021720 LIGHT SENSITIVE HYPOCOTYLS 10 (LSH10) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 | BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400020442 177 protein ST4.03ch07 + View
Trochodendron aralioides TAR626G0789 group3 + View
Trochodendron aralioides TAR624G0381 group9 - View
Trochodendron aralioides TAR627G0055 group6 + View
Trochodendron aralioides TAR629G1773 group0 - View
Theobroma cacao Thecc.01G150800 Pleckstrin domain-containing family N member 1 Chromosome_1 + View
Theobroma cacao Thecc.06G170400 Beta-lactamase-like protein ENSP00000383859 Chromosome_6 - View
Tarenaya hassleriana THA.LOC104820596 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like NW_010966274.1 + View
Tarenaya hassleriana THA.LOC104812875 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9-like NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104798427 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9-like NW_010967966.1 + View
Tarenaya hassleriana THA.LOC104806155 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9-like NW_010962392.1 + View
Tarenaya hassleriana THA.LOC104814257 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9-like NW_010965451.1 + View
Trifolium pratense TPR.G11786 Tp57577_TGAC_v2_LG4 - View
Tripterygium wilfordii TWI38G1254 NC_052252.1 + View
Tripterygium wilfordii TWI59G0888 NC_052248.1 - View
Vigna mungo VMungo1127G0567 CM024076.1 + View
Vigna mungo VMungo0251G0661 CM024069.1 + View
Vigna mungo VMungo1080G0908 CM024079.1 + View
Vigna mungo VMungo0540G1947 CM024075.1 + View
Vitis vinifera GSVIVG01021215001 chr10 + View
Vitis vinifera GSVIVG01020708001 chr12 - View