Gene: AT4G18610

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G18610
  • Transcript Identifier AT4G18610.1
  • Gene Type Coding gene
  • Location Chr4 : 10250794-10251369 : positive

Gene Family Information

  • ID HOM05D000378
  • #Genes/#Species 1291/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G18610.1
  • symbol LSH9
  • full_name LIGHT SENSITIVE HYPOCOTYLS 9
  • uniprot Q9SN52

Descriptions

  • Description LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)
  • Computational description LIGHT SENSITIVE HYPOCOTYLS 9 (LSH9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 307 Blast hits to 307 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 293; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009299
ISS, IBA
Gene OntologymRNA transcription1
GO:0090698
ISS
Gene Ontologypost-embryonic plant morphogenesis
GO:0009416
IBA
Gene Ontologyresponse to light stimulus1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISS, ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006936 ALOG domain
IPR040222 ALOG family
Mapman id Description
35.1 not assigned.annotated