Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0022715 PREDICTED: ABC transporter B family member 1 [Vitis vinifera] Chr4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G22140 LG-5 + View
Actinidia chinensis Actinidia28906 Lachesis_group3 - View
Arabidopsis lyrata AL4G33140 scaffold_4 + View
Arabidopsis thaliana AT2G36910 ATP binding cassette subfamily B1 Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Exerts nonredundant%2C partially overlapping functions with the ABC transporter encoded by AT3G28860. PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices%2C where IAA gradient-driven transport is impaired%2C may be required to confer directionality to auxin transport in those tissues. ATP binding cassette subfamily B1 (ABCB1)%3B FUNCTIONS IN: ATPase activity%2C coupled to transmembrane movement of substances%2C calmodulin binding%2C auxin efflux transmembrane transporter activity%3B INVOLVED IN: in 10 processes%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ABC transporter-like (InterPro:IPR003439)%2C ABC transporter%2C transmembrane domain%2C type 1 (InterPro:IPR011527)%2C ABC transporter integral membrane type 1 (InterPro:IPR017940)%2C ABC transporter%2C transmembrane domain (InterPro:IPR001140)%2C ABC transporter%2C conserved site (InterPro:IPR017871)%3B BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B19 (TAIR:AT3G28860.1)%3B Has 825599 Blast hits to 386427 proteins in 4134 species: Archae - 14573%3B Bacteria - 644325%3B Metazoa - 17752%3B Fungi - 12077%3B Plants - 9020%3B Viruses - 35%3B Other Eukaryotes - 127817 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB01g03808 ChrB01 - View
Corylus avellana Haze_20540 Similar to ABCB1: ABC transporter B family member 1 (Arabidopsis thaliana OX%3D3702) 10 + View
Coffea canephora Cc06_g04260 ABC transporter B family member 1 chr6 - View
Cardamine hirsuta CARHR131390 ABC transporter ATP-binding protein Chr4 + View
Carya illinoinensis CiPaw.09G172000 PTHR24221//PTHR24221:SF119 - FAMILY NOT NAMED // ABC TRANSPORTER B FAMILY MEMBER 1 Chr09 + View
Eutrema salsugineum Thhalv10016150m.g PTHR24221:SF119 - ABC TRANSPORTER B FAMILY MEMBER 1 scaffold_10 + View
Fragaria x ananassa FAN05G3771 PTHR24221//PTHR24221:SF119 - FAMILY NOT NAMED // ABC TRANSPORTER B FAMILY MEMBER 1 Fvb6-3 + View
Glycine max Glyma.10G055000 PTHR24221//PTHR24221:SF119 - FAMILY NOT NAMED // ABC TRANSPORTER B FAMILY MEMBER 1 Gm10 + View
Manihot esculenta Manes.08G011100 Chromosome08 - View
Prunus persica Prupe.7G129600 PTHR24221:SF119 - ABC TRANSPORTER B FAMILY MEMBER 1 Pp07 + View
Rhododendron simsii Rhsim03G0091100 chr03 + View
Solanum lycopersicum Solyc09g008240.3 ABC transporter (AHRD V3.3 *** A0A200R5N4_9MAGN) SL4.0ch09 - View
Schrenkiella parvula Sp4g19210 PTHR24221//PTHR24221:SF119 - FAMILY NOT NAMED // ABC TRANSPORTER B FAMILY MEMBER 1 ch4-6 + View
Solanum pennellii Sopen09g003060 Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AT3G28860. PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices, where IAA gradient-driven transport is impaired, may be required to confer directionality to auxin transport in those tissues. | ATP binding cassette subfamily B1 (ABCB1) | FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, calmodulin binding, auxin efflux transmembrane transporter activity | INVOLVED IN: in 10 processes | LOCATED IN: plasma membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core , ABC transporter-like , ABC transporter, transmembrane domain, type 1 , ABC transporter integral membrane type 1 , ABC transporter, transmembrane domain , ABC transporter, conserved site | BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B19 Spenn-ch09 - View