Gene: Sopen09g003060

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g003060
  • Transcript Identifier Sopen09g003060.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 1728805-1735628 : negative

Gene Family Information

  • ID HOM05D000068
  • #Genes/#Species 3957/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g003060.1

Descriptions

  • Description Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AT3G28860. PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices, where IAA gradient-driven transport is impaired, may be required to confer directionality to auxin transport in those tissues. | ATP binding cassette subfamily B1 (ABCB1) | FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, calmodulin binding, auxin efflux transmembrane transporter activity | INVOLVED IN: in 10 processes | LOCATED IN: plasma membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , ABC transporter-like , ABC transporter, transmembrane domain, type 1 , ABC transporter integral membrane type 1 , ABC transporter, transmembrane domain , ABC transporter, conserved site | BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B19
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009926
ISO
PLAZA Integrative Orthologyauxin polar transport AT2G36910
GO:0010315
ISO
PLAZA Integrative Orthologyauxin efflux AT2G36910
GO:0048443
ISO
PLAZA Integrative Orthologystamen development AT2G36910
GO:0043481
ISO
PLAZA Integrative Orthologyanthocyanin accumulation in tissues in response to UV light AT2G36910
GO:0009958
ISO
PLAZA Integrative Orthologypositive gravitropism AT2G36910
GO:0009639
ISO
PLAZA Integrative Orthologyresponse to red or far red light AT2G36910
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT2G36910
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT2G36910
GO:0008361
ISO
PLAZA Integrative Orthologyregulation of cell size AT2G36910
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT2G36910
GO:0055085
IEA
InterProtransmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010328
ISO
PLAZA Integrative Orthologyauxin influx transmembrane transporter activity AT2G36910
GO:0010329
ISO
PLAZA Integrative Orthologyauxin efflux transmembrane transporter activity AT2G36910
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G36910
GO:0005524
IEA
InterProATP binding
GO:0140359
IEA
InterProABC-type transporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G36910
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G36910
GO:0016021
IEA
InterProintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036640 ABC transporter type 1, transmembrane domain superfamily
IPR003439 ABC transporter-like, ATP-binding domain
IPR011527 ABC transporter type 1, transmembrane domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR039421 Type 1 protein exporter
Mapman id Description
24.1.3.1.1 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter