Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0042949 PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Nelumbo nucifera] Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G15780 LG-10 - View
Acer truncatum Atru.chr5.674 chr5 - View
Actinidia chinensis Actinidia10143 Lachesis_group0 + View
Actinidia chinensis Actinidia28116 Lachesis_group16 - View
Actinidia chinensis Actinidia06149 Lachesis_group21 - View
Actinidia chinensis Actinidia20245 Lachesis_group6 - View
Actinidia chinensis Actinidia34220 Lachesis_group3 - View
Arabidopsis lyrata AL5G44350 scaffold_5 - View
Avicennia marina MSTRG.8654 ScioBoG_11560_HRSCAF_11609 + View
Avicennia marina MSTRG.17347 ScioBoG_19743_HRSCAF_19834 - View
Avicennia marina MSTRG.20906 ScioBoG_26180_HRSCAF_26306 - View
Amaranthus hybridus Ah.05g179500 E3 ubiquitin-protein ligase SINAT3 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase SINAT3) (Seven in absentia homolog 3) AmaHy_arrow1_Scaffold_5 + View
Aquilegia oxysepala Aqoxy7G00080 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9VZJ2N PTHR10315//PTHR10315:SF41 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT5 arahy.Tifrunner.gnm1.Arahy.12 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HXI3V8 PTHR10315//PTHR10315:SF41 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT5 arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EE333K PTHR10315//PTHR10315:SF41 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT5 arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT3G61790 Protein with RING/U-box and TRAF-like domain Protein with RING/U-box and TRAF-like domains%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C zinc ion binding%3B INVOLVED IN: multicellular organismal development%2C ubiquitin-dependent protein catabolic process%2C protein ubiquitination%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974)%2C Seven-in-absentia protein%2C TRAF-like domain (InterPro:IPR018121)%2C Zinc finger%2C SIAH-type (InterPro:IPR013010)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Seven In Absentia Homolog-type (InterPro:IPR013323)%2C Seven-in-absentia protein%2C sina (InterPro:IPR004162)%2C TRAF-type (InterPro:IPR013322)%3B BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT4G27880.1)%3B Has 1836 Blast hits to 1817 proteins in 706 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1264%3B Fungi - 11%3B Plants - 486%3B Viruses - 2%3B Other Eukaryotes - 73 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0602G013 AmTr_v1.0_scaffold00021 + View
Brassica carinata BcaC02g10251 ChrC02 - View
Brassica carinata BcaC01g05066 ChrC01 - View
Brassica carinata BcaC08g45162 ChrC08 - View
Brassica napus A03p25660 A03 + View
Brassica napus C04p31090 C04 + View
Brassica napus A07p25750 A07 - View
Brassica napus C06p27970 C06 - View
Brassica oleracea BolC6t37958H C6 - View
Brassica rapa BraA07t30215Z A07 - View
Brassica rapa BraA04t15810Z A04 + View
Beta vulgaris EL10Ac1g00263 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) Chr1_EL10_PGA_scaffold3 + View
Capsicum annuum CAN.G1415.27 PGAv.1.6.scaffold1415 + View
Cannabis sativa CANSAT56G4200 NC_044371.1 + View
Cicer arietinum L. Ca_23529_v3 Ca_LG7_v3 + View
Cicer arietinum L. Ca_09509_v3 Ca_LG3_v3 - View
Cicer arietinum L. Ca_16707_v3 Ca_LG5_v3 - View
Corylus avellana Haze_15662 Similar to SINAT3: E3 ubiquitin-protein ligase SINAT3 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc02_g39440 E3 ubiquitin-protein ligase SINAT4 chr2 - View
Citrus clementina Ciclev10021159m.g scaffold_3 + View
Ceratophyllum demersum CDE04G1764 2 - View
Carpinus fangiana Cfa003797 Cfa01 + View
Cardamine hirsuta CARHR172120 Ubiquitin ligase Chr5 - View
Corchorus olitorius COL.COLO4_06281 Seven-in-absentia protein%2C sina AWUE01012661.1 + View
Carica papaya Cpa.g.sc3.84 supercontig_3 - View
Chenopodium quinoa AUR62004499 SINAT5: E3 ubiquitin-protein ligase SINAT5 C_Quinoa_Scaffold_4250 - View
Chenopodium quinoa AUR62023454 SINAT3: E3 ubiquitin-protein ligase SINAT3 C_Quinoa_Scaffold_1606 + View
Capsella rubella Carub.0005s2853 PTHR10315//PTHR10315:SF34 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED scaffold_5 - View
Daucus carota DCAR_025256 hypothetical protein DCARv2_Chr7 - View
Daucus carota DCAR_010601 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv35118 GWHABJS00000016 - View
Durio zibethinus Duzib205G1235 NW_019168381.1 - View
Durio zibethinus Duzib133G1032 NW_019167938.1 - View
Durio zibethinus Duzib268G1425 NW_019168270.1 + View
Durio zibethinus Duzib084G1129 NW_019167827.1 + View
Eucalyptus grandis Eucgr.E00050 Chr05 + View
Erythranthe guttata Migut.B01877 scaffold_2 - View
Erythranthe guttata Migut.F00213 scaffold_6 + View
Erythranthe guttata Migut.N01541 scaffold_14 + View
Eutrema salsugineum Thhalv10006100m.g PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED scaffold_19 + View
Fragaria x ananassa FAN01G0791 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) Fvb7-4 + View
Fragaria x ananassa FAN10G2362 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) Fvb7-1 + View
Fragaria x ananassa FAN06G4373 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) Fvb7-2 - View
Fragaria x ananassa FAN10G0560 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) Fvb7-1 - View
Fragaria x ananassa FAN10G1937 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) Fvb7-1 - View
Fragaria x ananassa FAN03G0696 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) Fvb7-3 + View
Gossypium hirsutum Gohir.D12G116000 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) D12 - View
Gossypium hirsutum Gohir.A12G112400 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) A12 - View
Gossypium hirsutum Gohir.D11G101700 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) D11 - View
Gossypium hirsutum Gohir.A11G097000 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) A11 - View
Glycine max Glyma.19G256200 PTHR10315//PTHR10315:SF41 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT5 Gm19 - View
Glycine max Glyma.03G257700 PTHR10315//PTHR10315:SF41 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT5 Gm03 - View
Gossypium raimondii Gorai.008G125600 Chr08 - View
Gossypium raimondii Gorai.007G108500 Chr07 - View
Helianthus annuus HanXRQChr06g0170721 Probable protein with RING/U-box and TRAF-like domains HanXRQChr06 - View
Lupinus albus Lalb_Chr04g0254421 PTHR10315//PTHR10315:SF41 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT5 Lalb_Chr04 + View
Lupinus albus Lalb_Chr23g0271601 PTHR10315//PTHR10315:SF34 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Lalb_Chr23 - View
Lupinus albus Lalb_Chr17g0342731 PTHR10315//PTHR10315:SF41 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT5 Lalb_Chr17 - View
Lupinus albus Lalb_Chr18g0044481 PTHR10315:SF41 - E3 UBIQUITIN-PROTEIN LIGASE SINAT5 Lalb_Chr18 - View
Lupinus albus Lalb_Chr04g0261511 PTHR10315//PTHR10315:SF41 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT5 Lalb_Chr04 + View
Lupinus albus Lalb_Chr10g0100581 PTHR10315//PTHR10315:SF41 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT5 Lalb_Chr10 + View
Lotus japonicus Lj3g0014089 PTHR10315//PTHR10315:SF41 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT5 chr3 + View
Lotus japonicus Lj1g0004617 PTHR10315:SF41 - E3 UBIQUITIN-PROTEIN LIGASE SINAT5 chr1 + View
Lonicera japonica Lj7A500T116 GWHAAZE00000007 + View
Lonicera japonica Lj9A598T70 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_7_1060 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) Lsat_1_v8_lg_7 + View
Lactuca sativa Lsat_1_v5_gn_4_33741 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_3_140341 K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) Lsat_1_v8_lg_3 + View
Magnolia biondii MBI06_g46581_MAGBIO AED:0.27 Chr06 - View
Malus domestica MD01G1082000 Protein with RING/U-box and TRAF-like domains Chr01 - View
Malus domestica MD07G1150400 Protein with RING/U-box and TRAF-like domains Chr07 - View
Malus domestica MD07G1288600 Protein with RING/U-box and TRAF-like domains Chr07 + View
Malus domestica MD01G1218700 Protein with RING/U-box and TRAF-like domains Chr01 + View
Manihot esculenta Manes.05G022600 Chromosome05 + View
Medicago truncatula Medtr8g027520 ubiquitin ligase SINAT3 chr8 + View
Nicotiana tabacum Nitab4.5_0000258g0230 SIAH-type domain, E3 ubiquitin-protein ligase SINA like, Zinc finger, RING-type, TRAF-like, Seven-in-absentia protein, TRAF-like domain, Zinc finger, SIAH-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0000258 - View
Olea europaea Oeu007896.1 chr15 + View
Petunia axillaris Peaxi162Scf00218g01216 E3 ubiquitin-protein ligase SINAT3 Peaxi162Scf00218 - View
Petunia axillaris Peaxi162Scf00786g00013 E3 ubiquitin-protein ligase SINAT3 Peaxi162Scf00786 + View
Punica granatum PGR042G2037 NC_045130.1 + View
Prunus persica Prupe.2G189200 PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Pp02 - View
Prunus persica Prupe.2G310100 PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Pp02 + View
Pisum sativum Psat4g161640 Seven in absentia protein family chr4LG4 - View
Populus trichocarpa Potri.014G099200 PTHR10315//PTHR10315:SF34 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Chr14 - View
Populus trichocarpa Potri.002G171500 PTHR10315//PTHR10315:SF34 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Chr02 - View
Phaseolus vulgaris Phvul.006G113500 PTHR10315:SF41 - E3 UBIQUITIN-PROTEIN LIGASE SINAT5 Chr06 - View
Rhododendron simsii Rhsim01G0172800 chr01 - View
Rhododendron simsii Rhsim07G0004000 chr07 + View
Salvia bowleyana SalBow3G3206 GWHASIU00000006 - View
Salix brachista Sabra02G0141300 GWHAAZH00000002 + View
Simmondsia chinensis Sc23g0002080 GWHAASQ00000023 + View
Simmondsia chinensis Sc01g0010360 GWHAASQ00000001 - View
Sechium edule Sed0002073 LG09 + View
Sapria himalayana SHI13309 scaffold16_12220143 - View
Solanum lycopersicum Solyc10g009420.3 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G2WSD8_CAPBA) SL4.0ch10 + View
Solanum lycopersicum Solyc01g096020.4 E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G3BTI0_CAPCH) SL4.0ch01 - View
Schrenkiella parvula Sp5g01580 PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED ch5-1 + View
Solanum pennellii Sopen01g039740 Protein with RING/U-box and TRAF-like domains | FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding | INVOLVED IN: multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination | LOCATED IN: nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: TRAF-like , Seven-in-absentia protein, TRAF-like domain , Zinc finger, SIAH-type , Zinc finger, RING-type , Seven In Absentia Homolog-type , Seven-in-absentia protein, sina , TRAF-type | BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains Spenn-ch01 - View
Solanum pennellii Sopen10g005200 Protein with RING/U-box and TRAF-like domains | FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding | INVOLVED IN: multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process | LOCATED IN: mitochondrion, nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: TRAF-like , Seven-in-absentia protein, TRAF-like domain , Zinc finger, RING-type , Zinc finger, SIAH-type , Seven In Absentia Homolog-type , Seven-in-absentia protein, sina , TRAF-type | BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains Spenn-ch10 + View
Solanum tuberosum PGSC0003DMG400000229 Ubiquitin ligase SINAT3 ST4.03ch01 - View
Solanum tuberosum PGSC0003DMG400007012 Ubiquitin ligase SINAT3 ST4.03ch05 - View
Solanum tuberosum PGSC0003DMG400018878 Ubiquitin ligase SINAT3 ST4.03ch10 + View
Selenicereus undatus Hund16717 Scaffold_33675 - View
Selenicereus undatus Hund27193 Scaffold_2055 + View
Trochodendron aralioides TAR629G1438 group0 - View
Trochodendron aralioides TAR374G0934 group12 - View
Trochodendron aralioides TAR375G0786 group15 - View
Theobroma cacao Thecc.01G341900 RING/U-box and TRAF-like domains Chromosome_1 + View
Tarenaya hassleriana THA.LOC104817363 E3 ubiquitin-protein ligase SINAT3 NW_010965946.1 - View
Tarenaya hassleriana THA.LOC104802076 E3 ubiquitin-protein ligase SINAT3-like NW_010970490.1 - View
Trifolium pratense TPR.G4696 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI14G0543 NC_052249.1 - View
Tripterygium wilfordii TWI23G0651 NC_052239.1 - View
Tripterygium wilfordii TWI14G1273 NC_052249.1 + View
Vaccinium macrocarpon vmacro12674 Similar to SINAT4: E3 ubiquitin-protein ligase SINAT4 (Arabidopsis thaliana OX%3D3702) scaffold00220_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro10121 Similar to SINAT3: E3 ubiquitin-protein ligase SINAT3 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G0380 CM024075.1 + View
Vitis vinifera GSVIVG01027156001 chr15 + View