Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0035435 PREDICTED: RING-H2 finger protein ATL8 [Vitis vinifera] Chr9 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G6490 LG-4 + View
Actinidia chinensis Actinidia22886 Lachesis_group26 - View
Avicennia marina MSTRG.1000 ScioBoG_102833_HRSCAF_103052 + View
Amaranthus hybridus Ah.00g001100 RING-H2 finger protein ATL8 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase ATL8) AmaHy_arrow1_Contig177_quiver + View
Aquilegia oxysepala Aqoxy6G01564 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.U67RVC PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.08 + View
Arabidopsis thaliana AT1G20823 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to chitin%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G76410.1)%3B Has 9063 Blast hits to 9039 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2341%3B Fungi - 637%3B Plants - 4964%3B Viruses - 26%3B Other Eukaryotes - 1095 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G76410 RING/U-box superfamily protein ATL8%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G20823.1)%3B Has 9001 Blast hits to 8977 proteins in 267 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2299%3B Fungi - 634%3B Plants - 4930%3B Viruses - 29%3B Other Eukaryotes - 1109 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR0807G001 AmTr_v1.0_scaffold00044 - View
Brassica carinata BcaC08g47139 ChrC08 + View
Brassica carinata BcaC05g25984 ChrC05 + View
Brassica carinata BcaB02g07062 ChrB02 + View
Brassica carinata BcaC08g45530 ChrC08 - View
Brassica carinata BcaB05g24991 ChrB05 + View
Brassica napus A08p29220 A08 - View
Brassica napus A02p20670 A02 + View
Brassica napus A06p16810 A06 + View
Brassica napus A07p28500 A07 - View
Brassica oleracea BolC6t38331H C6 - View
Brassica rapa BraA08t34857Z A08 - View
Brassica rapa BraA06t24790Z A06 + View
Brassica rapa BraA07t30486Z A07 - View
Beta vulgaris EL10Ac1g01893 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr1_EL10_PGA_scaffold3 - View
Cicer arietinum L. Ca_15391_v3 Ca_LG5_v3 - View
Citrus clementina Ciclev10004041m.g scaffold_5 + View
Ceratophyllum demersum CDE04G2969 2 - View
Carpinus fangiana Cfa014125 Cfa05 + View
Cardamine hirsuta CARHR069970 Ring finger protein Chr2 + View
Carya illinoinensis CiPaw.08G076500 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr08 + View
Carya illinoinensis CiPaw.07G134800 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr07 - View
Citrullus lanatus ClCG11G018920 Ring finger protein CG_Chr11 + View
Cucumis melo MELO3C017047.2 RING-H2 finger protein ATL80 chr07 - View
Carica papaya Cpa.g.sc26.150 supercontig_26 - View
Cucumis sativus L. CsaV3_4G037520 RING-H2 finger protein ATL80 chr4 + View
Daucus carota DCAR_016793 hypothetical protein DCARv2_Chr5 + View
Durio zibethinus Duzib041G0072 NW_019167826.1 - View
Durio zibethinus Duzib116G0197 NW_019167949.1 - View
Erigeron canadensis ECA246G3966 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA238G4752 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.I02211 Chr09 - View
Eucalyptus grandis Eucgr.F01804 Chr06 + View
Fragaria x ananassa FAN28G0189 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1-1 + View
Fragaria x ananassa FAN23G1207 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1-3 - View
Fragaria vesca FvH4_1g10140 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1 - View
Gossypium hirsutum Gohir.D01G087600 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D01 - View
Glycine max Glyma.04G015200 KOG1493//KOG2930 - Anaphase-promoting complex (APC), subunit 11 // SCF ubiquitin ligase, Rbx1 component Gm04 - View
Glycine max Glyma.06G015200 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm06 - View
Gossypium raimondii Gorai.002G113500 Chr02 - View
Lupinus albus Lalb_Chr08g0246511 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lalb_Chr08 + View
Lupinus albus Lalb_Chr23g0265601 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lalb_Chr23 - View
Lupinus albus Lalb_Chr09g0324821 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lalb_Chr09 + View
Lotus japonicus Lj1g0023581 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED chr1 - View
Lactuca sativa Lsat_1_v5_gn_2_1360 PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_2_74100 Lsat_1_v8_lg_2 - View
Magnolia biondii MBI08_g29075_MAGBIO AED:0.03 Chr08 - View
Malus domestica MD02G1113400 RING/U-box superfamily protein Chr02 - View
Malus domestica MD06G1005400 RING/U-box superfamily protein Chr06 - View
Manihot esculenta Manes.01G156900 Chromosome01 + View
Manihot esculenta Manes.18G002800 Chromosome18 - View
Medicago truncatula Medtr3g116000 anaphase-promoting complex subunit 11 RING-H2 finger protein chr3 + View
Medicago truncatula Medtr8g073120 anaphase-promoting complex subunit 11 RING-H2 finger protein chr8 - View
Nelumbo nucifera Nn5g31023 chr5 + View
Nicotiana tabacum Nitab4.5_0001756g0170 Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type Nitab4.5_0001756 - View
Petunia axillaris Peaxi162Scf00064g00139 RING/U-box superfamily protein Peaxi162Scf00064 + View
Petunia axillaris Peaxi162Scf00680g00410 RING/U-box superfamily protein Peaxi162Scf00680 + View
Punica granatum PGR031G1175 NC_045127.1 + View
Punica granatum PGR083G1652 NC_045133.1 + View
Punica granatum PGR119G2347 NC_045132.1 - View
Papaver somniferum PSO170G5591 NC_039360.1 - View
Papaver somniferum PSO541G0890 NC_039363.1 + View
Papaver somniferum PSO210G0303 NC_039359.1 + View
Populus trichocarpa Potri.005G255200 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED Chr05 + View
Populus trichocarpa Potri.002G006400 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr02 - View
Phaseolus vulgaris Phvul.009G007400 KOG1493//KOG2930 - Anaphase-promoting complex (APC), subunit 11 // SCF ubiquitin ligase, Rbx1 component Chr09 + View
Phaseolus vulgaris Phvul.003G271400 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr03 + View
Quercus lobata QL02p015355 CM012294 - View
Quercus lobata QL06p053274 6 + View
Rhododendron simsii Rhsim10G0192000 chr10 - View
Rhododendron simsii Rhsim06G0004100 chr06 - View
Striga asiatica SGA_v2.0_scaffold133G34607 scaffold133 + View
Salix brachista Sabra05G0197700 GWHAAZH00000005 + View
Simmondsia chinensis Sc26g0004720 GWHAASQ00000026 + View
Simmondsia chinensis Sc15g0004090 GWHAASQ00000015 - View
Sechium edule Sed0005605 LG01 - View
Solanum lycopersicum Solyc04g082690.1 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LI04_ARTAN) SL4.0ch04 + View
Schrenkiella parvula Sp5g31570 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED ch5-7 + View
Solanum pennellii Sopen04g036320 ATL8 | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400009919 Zinc finger family protein ST4.03ch04 + View
Solanum tuberosum PGSC0003DMG400013666 RING-H2 finger protein ATL80 ST4.03ch02 - View
Trochodendron aralioides TAR376G0879 group14 + View
Trochodendron aralioides TAR628G0785 group5 + View
Theobroma cacao Thecc.01G002800 Basic helix-loop-helix-containing protein Chromosome_1 - View
Trifolium pratense TPR.G38120 Tp57577_TGAC_v2_LG7 + View
Vigna mungo VMungo1309G2755 CM024072.1 + View
Vitis vinifera GSVIVG01022306001 chr7 + View