Gene: Solyc04g082690.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g082690.1
  • Transcript Identifier Solyc04g082690.1.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 64255990-64256541 : positive

Gene Family Information

  • ID HOM05D000440
  • #Genes/#Species 1177/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g082690.1.1
  • uniprot A0A3Q7GC11
  • gene_id Solyc04g082690

Descriptions

  • Description RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LI04_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT1G20823
GO:0010966
ISO
PLAZA Integrative Orthologyregulation of phosphate transport AT1G20823
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT1G20823
GO:0070417
ISO
PLAZA Integrative Orthologycellular response to cold AT1G20823

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT1G20823

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G20823

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase