Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G2630 LG-5 - View
Acer truncatum Atru.chr5.1290 chr5 + View
Actinidia chinensis Actinidia21082 Lachesis_group9 - View
Actinidia chinensis Actinidia24858 Lachesis_group15 - View
Arabidopsis lyrata AL6G49840 scaffold_6 + View
Avicennia marina MSTRG.18197 ScioBoG_22153_HRSCAF_22259 + View
Avicennia marina MSTRG.12591 ScioBoG_17730_HRSCAF_17811 - View
Avicennia marina MSTRG.17424 ScioBoG_19834_HRSCAF_19925 + View
Amaranthus hybridus Ah.08g212740 AmaHy_arrow1_Scaffold_8 + View
Aquilegia oxysepala Aqoxy5G00639 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Y87QGW PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q7HD44 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT1G03457 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Ribonucleoprotein%2C BRUNO-like (InterPro:IPR015903)%2C Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding protein-defense related 1 (TAIR:AT4G03110.1)%3B Has 28459 Blast hits to 16672 proteins in 823 species: Archae - 14%3B Bacteria - 1483%3B Metazoa - 15787%3B Fungi - 3162%3B Plants - 5005%3B Viruses - 0%3B Other Eukaryotes - 3008 (source: NCBI BLink). RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Ribonucleoprotein%2C BRUNO-like (InterPro:IPR015903)%2C Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding protein-defense related 1 (TAIR:AT4G03110.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT4G03110 RNA-binding protein-defense related 1 Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity. RNA-binding protein-defense related 1 (RBP-DR1)%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: plant-type hypersensitive response%2C positive regulation of salicylic acid mediated signaling pathway%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Ribonucleoprotein%2C BRUNO-like (InterPro:IPR015903)%2C Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G03457.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). RNA-binding protein-defense related 1 (RBP-DR1)%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: plant-type hypersensitive response%2C positive regulation of salicylic acid mediated signaling pathway%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Ribonucleoprotein%2C BRUNO-like (InterPro:IPR015903)%2C Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G03457.1)%3B Has 16162 Blast hits to 12321 proteins in 473 species: Archae - 8%3B Bacteria - 251%3B Metazoa - 10325%3B Fungi - 1647%3B Plants - 2258%3B Viruses - 0%3B Other Eukaryotes - 1673 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0706G287 AmTr_v1.0_scaffold00057 - View
Brassica carinata BcaB01g01941 ChrB01 - View
Brassica carinata BcaC05g24528 ChrC05 + View
Brassica carinata BcaB01g01981 ChrB01 + View
Brassica carinata BcaC03g16207 ChrC03 - View
Brassica napus A09p02420 A09 - View
Brassica napus C09p02520 C09 - View
Brassica oleracea BolC9t53182H C9 - View
Brassica oleracea BolC2t10010H C2 - View
Brassica rapa BraA09t35889Z A09 - View
Brassica rapa BraA02t07498Z A02 - View
Brassica rapa BraA10t42472Z A10 - View
Beta vulgaris EL10Ac7g17361 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Chr7_EL10_PGA_scaffold5 - View
Cannabis sativa CANSAT25G1440 NC_044370.1 - View
Cicer arietinum L. Ca_09108_v3 Ca_LG3_v3 - View
Corylus avellana Haze_04802 Similar to BRN1: RNA-binding protein BRN1 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc01_g20140 Putative CUGBP Elav-like family member 5 chr1 - View
Citrus clementina Ciclev10020206m.g scaffold_3 - View
Ceratophyllum demersum CDE11G0383 9 - View
Cardamine hirsuta CARHR002830 RNA binding protein, putative Chr1 - View
Cardamine hirsuta CARHR251540 RNA binding protein, putative Chr8 - View
Carya illinoinensis CiPaw.07G099000 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Chr07 - View
Citrullus lanatus ClCG09G006550 CUGBP Elav-like family member 5 CG_Chr09 + View
Cucumis melo MELO3C015889.2 RNA-binding protein BRN1 chr01 - View
Corchorus olitorius COL.COLO4_08038 hypothetical protein AWUE01013554.1 + View
Carica papaya Cpa.g.sc9.154 supercontig_9 - View
Chenopodium quinoa AUR62036665 BRN1: RNA-binding protein BRN1 C_Quinoa_Scaffold_3901 + View
Chenopodium quinoa AUR62034606 BRN1: RNA-binding protein BRN1 C_Quinoa_Scaffold_3297 - View
Capsella rubella Carub.0001s0259 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) scaffold_1 - View
Capsella rubella Carub.0006s3395 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) scaffold_6 + View
Cucumis sativus L. CsaV3_7G028320 RNA binding protein, putative chr7 + View
Daucus carota DCAR_012432 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_018366 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv11289 GWHABJS00000007 + View
Davidia involucrata Dinv32986 GWHABJS00000010 - View
Durio zibethinus Duzib211G0254 NW_019168049.1 + View
Durio zibethinus Duzib138G1408 NW_019167893.1 - View
Erigeron canadensis ECA248G0504 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA236G2924 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.H01216 Chr08 + View
Erythranthe guttata Migut.N02120 scaffold_14 - View
Erythranthe guttata Migut.D00234 scaffold_4 + View
Eutrema salsugineum Thhalv10007707m.g K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) scaffold_5 + View
Eutrema salsugineum Thhalv10028982m.g K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) scaffold_3 - View
Fragaria x ananassa FAN20G2774 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Fvb2-3 + View
Fragaria x ananassa FAN27G2946 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Fvb2-1 - View
Fragaria x ananassa FAN24G0914 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Fvb2-2 + View
Fragaria x ananassa FAN15G1856 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Fvb2-4 - View
Fragaria vesca FvH4_2g24620 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Fvb2 - View
Gossypium hirsutum Gohir.D11G123400 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) D11 + View
Gossypium hirsutum Gohir.A11G118500 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) A11 + View
Gossypium hirsutum Gohir.D12G008100 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) D12 - View
Gossypium hirsutum Gohir.A12G008400 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) A12 - View
Glycine max Glyma.10G022200 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Gm10 + View
Glycine max Glyma.03G208500 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Gm03 - View
Glycine max Glyma.02G152000 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Gm02 - View
Glycine max Glyma.19G205700 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Gm19 - View
Gossypium raimondii Gorai.008G007900 Chr08 - View
Gossypium raimondii Gorai.007G132300 Chr07 + View
Hydrangea macrophylla Hma1.2p1_0399F.1_g144250 Hma1.2p1_0399F.1 + View
Lotus japonicus Lj1g0019373 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) chr1 + View
Lonicera japonica Lj2A1184G70 GWHAAZE00000002 - View
Lonicera japonica Lj1A40G69 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_5_188661 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_8_55081 Lsat_1_v8_lg_8 + View
Magnolia biondii MBI18_g21584_MAGBIO AED:0.39 Chr18 + View
Malus domestica MD11G1297000 RNA-binding protein-defense related 1 Chr11 - View
Malus domestica MD03G1275000 RNA-binding protein-defense related 1 Chr03 - View
Manihot esculenta Manes.05G069100 Chromosome05 + View
Manihot esculenta Manes.01G213000 Chromosome01 - View
Medicago truncatula Medtr7g107580 RNA-binding (RRM/RBD/RNP motif) family protein chr7 - View
Nelumbo nucifera Nn3g21251 chr3 - View
Nelumbo nucifera Nn4g26067 chr4 + View
Nicotiana tabacum Nitab4.5_0002093g0140 RNA recognition motif domain, Paraneoplastic encephalomyelitis antigen, Nucleotide-binding, alpha-beta plait Nitab4.5_0002093 - View
Nicotiana tabacum Nitab4.5_0001651g0030 Nucleotide-binding, alpha-beta plait, RNA recognition motif domain, Paraneoplastic encephalomyelitis antigen Nitab4.5_0001651 + View
Oryza sativa ssp. japonica Os07g0663300 Similar to RNA-binding protein BRUNOL5 (Fragment). Hypothetical conserved gene. chr07 - View
Petunia axillaris Peaxi162Scf01039g00135 RNA-binding protein-defense related 1 Peaxi162Scf01039 + View
Petunia axillaris Peaxi162Scf00017g00315 CUGBP Elav-like family member 5 Peaxi162Scf00017 - View
Punica granatum PGR119G1647 NC_045132.1 + View
Prunus persica Prupe.8G251600 Pp08 - View
Pisum sativum Psat3g025160 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr3LG5 + View
Papaver somniferum PSO832G1685 NC_039367.1 - View
Papaver somniferum PSO210G4988 NC_039359.1 - View
Populus trichocarpa Potri.014G135540 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Chr14 + View
Populus trichocarpa Potri.002G214000 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Chr02 - View
Phaseolus vulgaris Phvul.001G201600 Chr01 - View
Phaseolus vulgaris Phvul.007G166900 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) Chr07 + View
Quercus lobata QL12p023826 12 - View
Rosa chinensis RcHm_v2.0_Chr6g0292451 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim01G0279700 chr01 - View
Rhododendron simsii Rhsim13G0017900 chr13 + View
Striga asiatica SGA_v2.0_scaffold172G39058 scaffold172 - View
Striga asiatica SGA_v2.0_scaffold11G05762 scaffold11 + View
Salvia bowleyana SalBow3G2387 GWHASIU00000006 - View
Salix brachista Sabra02G0149500 GWHAAZH00000002 - View
Salix brachista Sabra14G0101600 GWHAAZH00000014 + View
Simmondsia chinensis Sc17g0003620 GWHAASQ00000017 + View
Sechium edule Sed0024941 LG07 - View
Sechium edule Sed0023984 LG09 - View
Solanum lycopersicum Solyc09g074360.4 RNA binding protein (AHRD V3.3 *** B6UFA0_MAIZE) SL4.0ch09 - View
Schrenkiella parvula Sp1g02420 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) ch1-1 - View
Schrenkiella parvula Sp6g03140 K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) ch6-1 - View
Solanum pennellii Sopen09g029200 Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity. | RNA-binding protein-defense related 1 (RBP-DR1) | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: plant-type hypersensitive response, positive regulation of salicylic acid mediated signaling pathway | LOCATED IN: cytoplasm | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Ribonucleoprotein, BRUNO-like , Paraneoplastic encephalomyelitis antigen , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400016844 RNA binding protein ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG401024041 Ribonucleoprotein ST4.03ch06 - View
Selenicereus undatus Hund05373 Scaffold_19641 - View
Trochodendron aralioides TAR365G0942 group16 - View
Trochodendron aralioides TAR636G3049 group1 - View
Theobroma cacao Thecc.01G289500 RNA-binding protein-defense related 1 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104801201 RNA-binding protein BRN1-like isoform X1 NW_010969548.1 + View
Tarenaya hassleriana THA.LOC104826010 LOW QUALITY PROTEIN: RNA-binding protein BRN1-like NW_010967707.1 - View
Trifolium pratense TPR.G32281 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI59G0395 NC_052248.1 + View
Tripterygium wilfordii TWI23G1167 NC_052239.1 + View
Vaccinium macrocarpon vmacro14955 Similar to BRN1: RNA-binding protein BRN1 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02513 Similar to BRN1: RNA-binding protein BRN1 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G1657 CM024070.1 - View
Vigna mungo VMungo0720G1557 CM024071.1 - View
Vitis vinifera GSVIVG01011013001 chr7 - View