Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0046964 PREDICTED: heterogeneous nuclear ribonucleoprotein R [Vitis vinifera] Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G1120 LG-5 - View
Aethionema arabicum Aa31LG1G10490 LG-1 + View
Acer truncatum Atru.chr5.754 chr5 - View
Actinidia chinensis Actinidia28091 Lachesis_group16 - View
Avicennia marina MSTRG.20922 ScioBoG_26180_HRSCAF_26306 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NFP3PK K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RLQ8YA K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9M4IQN PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GN1APU PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.12 - View
Arabidopsis thaliana AT4G00830 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G52660.2)%3B Has 49171 Blast hits to 28860 proteins in 1092 species: Archae - 87%3B Bacteria - 2901%3B Metazoa - 24152%3B Fungi - 5892%3B Plants - 6872%3B Viruses - 415%3B Other Eukaryotes - 8852 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaB01g02311 ChrB01 - View
Cicer arietinum L. Ca_09540_v3 Ca_LG3_v3 - View
Corylus avellana Haze_15720 Similar to LIF2: Heterogeneous nuclear ribonucleoprotein Q (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc02_g39900 RNA-binding (RRM/RBD/RNP motifs) family protein chr2 - View
Citrus clementina Ciclev10019942m.g scaffold_3 + View
Ceratophyllum demersum CDE04G0414 2 - View
Ceratophyllum demersum CDE12G0601 10 + View
Carpinus fangiana Cfa003747 Cfa01 + View
Cardamine hirsuta CARHR249500 RNA-binding protein Chr8 - View
Carya illinoinensis CiPaw.02G044500 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Chr02 - View
Carya illinoinensis CiPaw.01G081500 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Chr01 - View
Cucumis melo MELO3C005985.2 heterogeneous nuclear ribonucleoprotein R isoform X2 chr06 + View
Capsella rubella Carub.0006s3585 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN scaffold_6 + View
Cucumis sativus L. CsaV3_3G007650 Heterogeneous nuclear ribonucleoprotein like chr3 + View
Daucus carota DCAR_002979 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv34254 GWHABJS00000016 - View
Davidia involucrata Dinv32639 GWHABJS00000020 - View
Durio zibethinus Duzib138G1613 NW_019167893.1 - View
Durio zibethinus Duzib133G0410 NW_019167938.1 - View
Eucalyptus grandis Eucgr.D02648 Chr04 - View
Erythranthe guttata Migut.B01919 scaffold_2 - View
Eutrema salsugineum Thhalv10028602m.g PTHR24012:SF479 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN scaffold_3 - View
Fragaria x ananassa FAN10G4233 K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) Fvb7-1 - View
Fragaria x ananassa FAN06G3782 K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) Fvb7-2 - View
Fragaria x ananassa FAN01G1546 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Fvb7-4 + View
Fragaria x ananassa FAN10G4319 K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) Fvb7-1 - View
Fragaria x ananassa FAN06G0890 K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) Fvb7-2 - View
Fragaria vesca FvH4_7g17500 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Fvb7 - View
Gossypium hirsutum Gohir.D11G105000 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN D11 - View
Gossypium hirsutum Gohir.A11G100300 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN A11 - View
Glycine max Glyma.19G259200 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Gm19 - View
Glycine max Glyma.03G260500 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Gm03 - View
Gossypium raimondii Gorai.007G112300 Chr07 - View
Lupinus albus Lalb_Chr17g0342961 PTHR24012:SF479 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Lalb_Chr17 - View
Lupinus albus Lalb_Chr04g0254221 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Lalb_Chr04 + View
Lupinus albus Lalb_Chr18g0044681 PTHR24012:SF479 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Lalb_Chr18 - View
Lotus japonicus Lj1g0019303 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN chr1 + View
Lonicera japonica Lj7C495G5 GWHAAZE00000007 + View
Lonicera japonica Lj9C604G17 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_4_31720 Lsat_1_v8_lg_4 + View
Malus domestica MD07G1157800 RNA-binding (RRM/RBD/RNP motifs) family protein Chr07 - View
Malus domestica MD01G1087600 RNA-binding (RRM/RBD/RNP motifs) family protein Chr01 - View
Manihot esculenta Manes.01G240900 Chromosome01 + View
Manihot esculenta Manes.05G017400 Chromosome05 + View
Medicago truncatula Medtr7g118120 RNA recognition motif, a.k.a. RRM, RBD protein chr7 + View
Nelumbo nucifera Nn3g18846 chr3 - View
Nelumbo nucifera Nn1g00414 chr1 - View
Petunia axillaris Peaxi162Scf00087g00043 RNA-binding (RRM/RBD/RNP motifs) family protein Peaxi162Scf00087 + View
Punica granatum PGR031G3901 NC_045127.1 + View
Prunus persica Prupe.2G196200 Pp02 - View
Pisum sativum Psat3g000800 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr3LG5 + View
Papaver somniferum PSO384G0842 NC_039368.1 + View
Papaver somniferum PSO135G0173 NW_020631041.1 - View
Populus trichocarpa Potri.002G178200 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Chr02 - View
Populus trichocarpa Potri.014G104500 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Chr14 - View
Phaseolus vulgaris Phvul.009G257300 Chr09 - View
Quercus lobata QL08p046833 8 - View
Rosa chinensis RcHm_v2.0_Chr1g0360911 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim01G0179100 chr01 - View
Salix brachista Sabra02G0135400 GWHAAZH00000002 + View
Salix brachista Sabra14G0076800 GWHAAZH00000014 - View
Simmondsia chinensis Sc23g0001860 GWHAASQ00000023 + View
Sechium edule Sed0005231 LG02 - View
Sechium edule Sed0003866 LG12 + View
Solanum lycopersicum Solyc10g009220.3 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** A0A2U1MU52_ARTAN) SL4.0ch10 + View
Schrenkiella parvula Sp6g01290 PTHR24012//PTHR24012:SF479 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN ch6-1 - View
Solanum pennellii Sopen10g005010 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein . Spenn-ch10 + View
Solanum tuberosum PGSC0003DMG400010823 RNA-binding region RNP-1 (RNA recognition motif); Calcium-binding EF-hand ST4.03ch10 + View
Selenicereus undatus Hund16746 Scaffold_33675 - View
Trochodendron aralioides TAR374G1666 group12 - View
Trochodendron aralioides TAR629G1242 group0 - View
Theobroma cacao Thecc.01G334600 RNA-binding family protein Chromosome_1 + View
Trifolium pratense TPR.G4750 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI23G0723 NC_052239.1 + View
Tripterygium wilfordii TWI59G0118 NC_052248.1 + View
Vaccinium macrocarpon vmacro12650 Similar to LIF2: Heterogeneous nuclear ribonucleoprotein Q (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G1785 CM024072.1 + View
Vitis vinifera GSVIVG01027425001 chr15 + View