Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0029750 cyclophilin b [Camellia oleifera] Chr10 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G14550 LG-3 + View
Acer truncatum Atru.chr11.2375 chr11 - View
Actinidia chinensis Actinidia08049 Lachesis_group15 - View
Actinidia chinensis Actinidia30622 Lachesis_group10 + View
Arabidopsis lyrata AL6G23720 scaffold_6 - View
Avicennia marina MSTRG.477 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.8025 ScioBoG_102841_HRSCAF_103114 - View
Amaranthus hybridus Ah.03g135910 Photosynthetic NDH subunit of lumenal location 5, chloroplastic (Cyclophilin of 20 kDa 2) (Peptidyl-prolyl cis-trans isomerase CYP20-2) (PPIase CYP20-2) (EC 5.2.1.8) (Rotamase CYP20-2) (Thylakoid lumen PPIase of 20 kDa) (TLP20) AmaHy_arrow1_Scaffold_3 + View
Arabidopsis thaliana AT5G13120 cyclophilin 20-2 Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone. cyclophilin 20-2 (CYP20-2)%3B FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity%3B INVOLVED IN: protein folding%2C NAD(P)H dehydrogenase complex assembly%3B LOCATED IN: in 6 components%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type (InterPro:IPR002130)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type%2C conserved site (InterPro:IPR020892)%3B BEST Arabidopsis thaliana protein match is: rotamase CYP 4 (TAIR:AT3G62030.2)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB01g05375 ChrB01 + View
Brassica napus A03p05820 A03 - View
Brassica napus C03p06770 C03 - View
Brassica oleracea BolC3t13184H C3 - View
Brassica rapa BraA03t09921Z A03 - View
Beta vulgaris EL10Ac6g13544 K03768 - peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] (PPIB, ppiB) Chr6_EL10_PGA_scaffold0 - View
Cannabis sativa CANSAT01G1152 NC_044373.1 + View
Corylus avellana Haze_12455 Similar to PNSL5: Photosynthetic NDH subunit of lumenal location 5, chloroplastic (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc11_g17290 Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic chr11 - View
Citrus clementina Ciclev10032474m.g scaffold_4 + View
Ceratophyllum demersum CDE02G1549 1 + View
Carpinus fangiana Cfa009395 Cfa03 - View
Cardamine hirsuta CARHR200350 Peptidyl-prolyl cis-trans isomerase Chr6 + View
Carya illinoinensis CiPaw.06G106000 PTHR11071//PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Chr06 - View
Carya illinoinensis CiPaw.05G106200 PTHR11071:SF247 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D Chr05 + View
Citrullus lanatus ClCG06G001940 Peptidyl-prolyl cis-trans isomerase CG_Chr06 + View
Cucumis melo MELO3C022335.2 Peptidyl-prolyl cis-trans isomerase chr11 - View
Chenopodium quinoa AUR62028895 PNSL5: Photosynthetic NDH subunit of lumenal location 5, chloroplastic C_Quinoa_Scaffold_2837 + View
Chenopodium quinoa AUR62005658 PNSL5: Photosynthetic NDH subunit of lumenal location 5, chloroplastic C_Quinoa_Scaffold_1214 - View
Capsella rubella Carub.0006s1129 K03768 - peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] (PPIB, ppiB) scaffold_6 - View
Cucumis sativus L. CsaV3_6G007990 Peptidyl-prolyl cis-trans isomerase chr6 + View
Daucus carota DCAR_024654 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_026446 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv11703 GWHABJS00000008 - View
Durio zibethinus Duzib251G0830 NW_019167971.1 - View
Erigeron canadensis ECA246G0599 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.H04606 Chr08 + View
Erythranthe guttata Migut.K01010 scaffold_11 - View
Eutrema salsugineum Thhalv10014434m.g K03768 - peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] (PPIB, ppiB) scaffold_2 - View
Fragaria x ananassa FAN12G3876 PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Fvb4-3 - View
Fragaria x ananassa FAN17G2771 PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Fvb4-2 - View
Fragaria x ananassa FAN07G0279 PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Fvb4-4 - View
Fragaria vesca FvH4_4g23300 PTHR11071//PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Fvb4 + View
Gossypium hirsutum Gohir.D01G020500 PTHR11071//PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C D01 + View
Gossypium hirsutum Gohir.A01G022000 PTHR11071//PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C A01 + View
Gossypium raimondii Gorai.002G023000 Chr02 + View
Helianthus annuus HanXRQChr05g0128921 Probable cyclophilin 20-2 HanXRQChr05 - View
Hydrangea macrophylla Hma1.2p1_0065F.1_g034980 Hma1.2p1_0065F.1 + View
Lonicera japonica Lj6A831T30 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_0_37081 K03768 - peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] (PPIB, ppiB) Lsat_1_v8_lg_3 - View
Malus domestica MD13G1123100 cyclophilin 20-2 Chr13 - View
Malus domestica MD16G1123800 cyclophilin 20-2 Chr16 - View
Manihot esculenta Manes.13G008000 Chromosome13 + View
Manihot esculenta Manes.12G007500 Chromosome12 + View
Nelumbo nucifera Nn3g16382 chr3 + View
Nicotiana tabacum Nitab4.5_0001771g0120 Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain, Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site Nitab4.5_0001771 + View
Olea europaea Oeu058907.1 chr11 - View
Olea europaea Oeu001319.1 chr12 - View
Punica granatum PGR119G2335 NC_045132.1 - View
Prunus persica Prupe.1G221800 PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Pp01 + View
Papaver somniferum PSO017G4497 NC_039362.1 + View
Papaver somniferum PSO478G1331 NC_039361.1 + View
Populus trichocarpa Potri.003G167700 PTHR11071//PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Chr03 + View
Populus trichocarpa Potri.001G060200 PTHR11071//PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Chr01 - View
Phaseolus vulgaris Phvul.002G284200 PTHR11071:SF252 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-3-RELATED Chr02 - View
Phaseolus vulgaris Phvul.007G001100 PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Chr07 + View
Quercus lobata QL03p051323 3 + View
Rosa chinensis RcHm_v2.0_Chr4g0429661 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0023300 chr12 + View
Salvia bowleyana SalBow2G3570 GWHASIU00000007 - View
Salix brachista Sabra03G0123000 GWHAAZH00000003 + View
Simmondsia chinensis Sc14g0009160 GWHAASQ00000014 - View
Simmondsia chinensis Sc04g0010340 GWHAASQ00000004 - View
Sechium edule Sed0010759 LG07 - View
Sapria himalayana SHI04194 scaffold6_19132642 - View
Schrenkiella parvula Sp6g30860 K03768 - peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] (PPIB, ppiB) ch6-6 + View
Solanum pennellii Sopen01g005550 Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone. | cyclophilin 20-2 (CYP20-2) | CONTAINS InterPro DOMAIN/s: Cyclophilin-like , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site | BEST Arabidopsis thaliana protein match is: rotamase CYP 4 ., Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) (CYP B) - Vicia faba (Broad bean), Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400005232 Peptidyl-prolyl cis-trans isomerase ST4.03ch01 + View
Selenicereus undatus Hund25483 Scaffold_3410 - View
Trochodendron aralioides TAR371G0135 group13 - View
Trochodendron aralioides TAR629G2898 group0 + View
Theobroma cacao Thecc.02G200400 Peptidyl-prolyl cis-trans isomerase Chromosome_2 + View
Tarenaya hassleriana THA.LOC104825485 photosynthetic NDH subunit of lumenal location 5%2C chloroplastic NW_010967396.1 + View
Tripterygium wilfordii TWI18G0082 NC_052241.1 - View
Tripterygium wilfordii TWI75G1364 NC_052253.1 - View
Tripterygium wilfordii TWI36G1079 NC_052237.1 + View
Vaccinium macrocarpon vmacro01044 Similar to PNSL5: Photosynthetic NDH subunit of lumenal location 5, chloroplastic (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G2266 CM024069.1 - View
Vigna mungo VMungo0720G0602 CM024071.1 - View
Vitis vinifera GSVIVG01000919001 chr1 - View