Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0029930 unnamed protein product [Coffea canephora] Chr4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G16190 LG-1 + View
Aethionema arabicum Aa31LG4G18280 LG-4 - View
Acer truncatum Atru.chr13.858 chr13 + View
Acer truncatum Atru.chr3.1042 chr3 + View
Actinidia chinensis Actinidia11968 Lachesis_group11 - View
Actinidia chinensis Actinidia36425 Lachesis_group4 - View
Actinidia chinensis Actinidia10215 Lachesis_group26 + View
Arabidopsis lyrata AL8G43630 scaffold_8 - View
Arabidopsis lyrata AL5G29800 scaffold_5 - View
Aquilegia oxysepala Aqoxy6G02536 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IXAE06 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K98I53 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT3G49810 ARM repeat superfamily protein Encodes a protein with E3 ubiquitin ligase activity that is involved in negative regulation of salt stress tolerance during germination. ARM repeat superfamily protein%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C binding%3B INVOLVED IN: protein ubiquitination%3B LOCATED IN: ubiquitin ligase complex%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G65920.1)%3B Has 2157 Blast hits to 2086 proteins in 103 species: Archae - 0%3B Bacteria - 14%3B Metazoa - 79%3B Fungi - 29%3B Plants - 1932%3B Viruses - 3%3B Other Eukaryotes - 100 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0739G122 AmTr_v1.0_scaffold00065 - View
Brassica carinata BcaB04g20037 ChrB04 - View
Brassica carinata BcaB05g23160 ChrB05 - View
Brassica carinata BcaC09g49975 ChrC09 - View
Brassica carinata BcaC04g23242 ChrC04 + View
Brassica napus C01p30480 C01 + View
Brassica napus C09p10770 C09 - View
Brassica napus A01p24450 A01 + View
Brassica napus A09p09220 A09 - View
Brassica oleracea BolC1t02991H C1 + View
Brassica oleracea BolC9t53972H C9 - View
Brassica rapa BraA01t02358Z A01 + View
Brassica rapa BraA09t36574Z A09 - View
Beta vulgaris EL10Ac1g02357 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Chr1_EL10_PGA_scaffold3 + View
Cannabis sativa CANSAT01G3080 NC_044373.1 + View
Cicer arietinum L. Ca_24676_v3 Ca_LG8_v3 - View
Corylus avellana Haze_22412 Similar to PUB30: U-box domain-containing protein 30 (Arabidopsis thaliana OX%3D3702) 3 - View
Corylus avellana Haze_15265 Similar to PUB30: U-box domain-containing protein 30 (Arabidopsis thaliana OX%3D3702) 11 - View
Citrus clementina Ciclev10025589m.g scaffold_7 - View
Carpinus fangiana Cfa004149 Cfa01 + View
Carpinus fangiana Cfa013753 Cfa05 - View
Cardamine hirsuta CARHR279930 U-box domain-containing protein Chr8 - View
Cardamine hirsuta CARHR158880 U-box domain-containing protein Chr5 - View
Carya illinoinensis CiPaw.07G173100 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Chr07 - View
Carya illinoinensis CiPaw.01G002800 PTHR22849//PTHR22849:SF6 - WDSAM1 PROTEIN // U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Chr01 - View
Carya illinoinensis CiPaw.08G051300 PTHR22849//PTHR22849:SF6 - WDSAM1 PROTEIN // U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Chr08 + View
Citrullus lanatus ClCG08G016620 U-box domain-containing family protein CG_Chr08 + View
Cucumis melo MELO3C016831.2 RING-type E3 ubiquitin transferase chr07 - View
Cucumis melo MELO3C010791.2 RING-type E3 ubiquitin transferase chr03 + View
Carica papaya Cpa.g.sc142.52 supercontig_142 + View
Chenopodium quinoa AUR62034998 PUB30: U-box domain-containing protein 30 C_Quinoa_Scaffold_1319 - View
Capsella rubella Carub.0005s1616 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED scaffold_5 - View
Cucumis sativus L. CsaV3_2G025990 RING-type E3 ubiquitin transferase chr2 - View
Daucus carota DCAR_025817 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv39210 GWHABJS00000011 - View
Davidia involucrata Dinv26949 GWHABJS00000014 + View
Davidia involucrata Dinv44940 GWHABJS00000002 - View
Durio zibethinus Duzib187G0295 NW_019167860.1 - View
Durio zibethinus Duzib093G1769 NW_019167937.1 - View
Durio zibethinus Duzib147G0803 NW_019168470.1 - View
Durio zibethinus Duzib264G1008 NW_019167960.1 - View
Erigeron canadensis ECA232G3172 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA238G3262 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.I00687 Chr09 + View
Eutrema salsugineum Thhalv10010374m.g PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED scaffold_16 + View
Fragaria x ananassa FAN23G1690 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Fvb1-3 + View
Fragaria x ananassa FAN20G0189 PTHR22849//PTHR22849:SF6 - WDSAM1 PROTEIN // U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Fvb2-3 + View
Fragaria x ananassa FAN27G1252 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Fvb2-1 - View
Fragaria x ananassa FAN19G1007 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Fvb1-4 + View
Fragaria x ananassa FAN28G0141 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Fvb1-1 - View
Fragaria x ananassa FAN24G0727 PTHR22849//PTHR22849:SF6 - WDSAM1 PROTEIN // U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Fvb2-2 + View
Fragaria x ananassa FAN15G3338 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Fvb2-4 - View
Fragaria x ananassa FAN26G1731 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Fvb1-2 + View
Fragaria vesca FvH4_1g18010 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Fvb1 + View
Fragaria vesca FvH4_2g32810 PTHR22849//PTHR22849:SF6 - WDSAM1 PROTEIN // U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Fvb2 - View
Gossypium hirsutum Gohir.D06G021800 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED D06 + View
Gossypium hirsutum Gohir.A12G077900 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED A12 + View
Gossypium hirsutum Gohir.A06G024700 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED A06 + View
Gossypium hirsutum Gohir.D12G076100 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED D12 - View
Glycine max Glyma.11G046500 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Gm11 - View
Glycine max Glyma.06G047800 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Gm06 + View
Glycine max Glyma.01G195200 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Gm01 + View
Glycine max Glyma.04G047100 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Gm04 + View
Glycine max Glyma.14G089060 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Gm14 + View
Glycine max Glyma.17G233600 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Gm17 - View
Glycine max Glyma.05G107300 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Gm05 + View
Gossypium raimondii Gorai.010G026400 Chr10 + View
Gossypium raimondii Gorai.008G084500 Chr08 + View
Helianthus annuus HanXRQChr11g0323091 Putative zinc finger, RING/FYVE/PHD-type; Armadillo-type fold HanXRQChr11 - View
Lupinus albus Lalb_Chr09g0323681 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Lalb_Chr09 + View
Lupinus albus Lalb_Chr05g0213791 PTHR22849//PTHR22849:SF6 - WDSAM1 PROTEIN // U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Lalb_Chr05 + View
Lupinus albus Lalb_Chr16g0378941 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Lalb_Chr16 + View
Lotus japonicus Lj2g0027311 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED chr2 - View
Lotus japonicus Lj5g0021849 PTHR22849//PTHR22849:SF6 - WDSAM1 PROTEIN // U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED chr5 - View
Lactuca sativa Lsat_1_v5_gn_2_82541 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_4_160401 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Lsat_1_v8_lg_4 - View
Magnolia biondii MBI16_g16459_MAGBIO AED:0.15 Chr16 + View
Magnolia biondii MBI16_g39104_MAGBIO AED:0.00 Chr16 + View
Malus domestica MD15G1066700 ARM repeat superfamily protein Chr15 - View
Malus domestica MD08G1079800 ARM repeat superfamily protein Chr08 - View
Manihot esculenta Manes.13G109900 Chromosome13 - View
Manihot esculenta Manes.18G048200 Chromosome18 + View
Medicago truncatula Medtr5g015210 E3 ubiquitin ligase PUB14 chr5 - View
Oryza sativa ssp. japonica Os03g0232600 U-Box E3 ubiquitin ligase, Regulation of brassinosteroid-mediated growth chr03 - View
Punica granatum PGR004G0155 NC_045131.1 + View
Prunus persica Prupe.6G218400 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Pp06 - View
Prunus persica Prupe.1G420500 PF04564 - U-box domain (U-box) Pp01 - View
Pisum sativum Psat2g172040 U-box domain chr2LG1 + View
Papaver somniferum PSO541G1567 NC_039363.1 - View
Papaver somniferum PSO675G1318 NC_039358.1 + View
Populus trichocarpa Potri.002G116500 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Chr02 - View
Phaseolus vulgaris Phvul.003G233800 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Chr03 - View
Phaseolus vulgaris Phvul.009G073300 PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED Chr09 + View
Quercus lobata QL06p039096 6 - View
Quercus lobata QL12p038383 12 + View
Rosa chinensis RcHm_v2.0_Chr6g0309891 RcHm_v2.0_Chr6 + View
Rosa chinensis RcHm_v2.0_Chr2g0108501 RcHm_v2.0_Chr2 + View
Salix brachista Sabra02G0091800 GWHAAZH00000002 - View
Simmondsia chinensis Sc02g0008060 GWHAASQ00000002 + View
Simmondsia chinensis Sc15g0005430 GWHAASQ00000015 - View
Sechium edule Sed0008068 LG13 + View
Solanum lycopersicum Solyc04g077610.4 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2ZR90_CAPAN) SL4.0ch04 - View
Schrenkiella parvula Sp5g12280 PTHR22849//PTHR22849:SF6 - WDSAM1 PROTEIN // U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED ch5-1 + View
Solanum pennellii Sopen04g031250 ARM repeat superfamily protein | FUNCTIONS IN: ubiquitin-protein ligase activity, binding | INVOLVED IN: protein ubiquitination | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400004911 E3 ubiquitin ligase PUB14 ST4.03ch04 - View
Trochodendron aralioides TAR376G0146 group14 - View
Trochodendron aralioides TAR628G1151 group5 - View
Trochodendron aralioides TAR381G0634 group11 + View
Trochodendron aralioides TAR625G0143 group4 + View
Theobroma cacao Thecc.08G085700 ARM repeat superfamily protein Chromosome_8 - View
Theobroma cacao Thecc.01G074700 ARM repeat superfamily protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104819268 U-box domain-containing protein 30 NW_010966177.1 + View
Trifolium pratense TPR.G9330 Tp57577_TGAC_v2_scaf_554 + View
Vaccinium macrocarpon vmacro04591 Similar to PUB30: U-box domain-containing protein 30 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G0771 CM024069.1 - View
Vitis vinifera GSVIVG01009313001 chr18 - View