Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0018482 sucrose non-fermenting 1 [Camellia sinensis] Contig1002 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aquilegia oxysepala Aqoxy3G03498 CHR03 - View
Arabidopsis thaliana AT5G39440 SNF1-related protein kinase 1.3 SNF1-related protein kinase 1.3 (SnRK1.3)%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Kinase-associated KA1 (InterPro:IPR001772)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Ubiquitin-associated/translation elongation factor EF1B%2C N-terminal%2C eukaryote (InterPro:IPR015940)%2C Protein kinase%2C Snf1-like AMPK (InterPro:IPR015741)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636)%3B BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 (TAIR:AT3G29160.2)%3B Has 134559 Blast hits to 132128 proteins in 4775 species: Archae - 156%3B Bacteria - 15425%3B Metazoa - 49691%3B Fungi - 13625%3B Plants - 32691%3B Viruses - 538%3B Other Eukaryotes - 22433 (source: NCBI BLink). Chr5 + View
Brassica napus C02p55340 C02 - View
Capsicum annuum CAN.G479.56 PGAv.1.6.scaffold479 + View
Corylus avellana Haze_14494 Similar to KIN10: SNF1-related protein kinase catalytic subunit alpha KIN10 (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc04_g14370 SNF1-related protein kinase catalytic subunit alpha KIN10 chr4 + View
Davidia involucrata Dinv10660 GWHABJS00000006 + View
Davidia involucrata Dinv33789 GWHABJS00000014 - View
Davidia involucrata Dinv38749 GWHABJS00000019 + View
Davidia involucrata Dinv25322 GWHABJS00000012 + View
Durio zibethinus Duzib264G1095 NW_019167960.1 - View
Durio zibethinus Duzib147G1368 NW_019168470.1 + View
Erigeron canadensis ECA246G0178 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA234G0844 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA246G3963 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.B00544 Chr02 - View
Erythranthe guttata Migut.K01302 scaffold_11 + View
Erythranthe guttata Migut.I00215 scaffold_9 - View
Hydrangea macrophylla Hma1.2p1_0060F.1_g033470 Hma1.2p1_0060F.1 + View
Lotus japonicus Lj2g0018663 PTHR24343//PTHR24343:SF156 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED chr2 + View
Lonicera japonica Lju41C9T1 GWHAAZE00000094 + View
Lonicera japonica Lj4A114T78 GWHAAZE00000004 - View
Lonicera japonica Lj5A107G96 GWHAAZE00000005 + View
Manihot esculenta Manes.01G100900 Chromosome01 + View
Nicotiana tabacum Nitab4.5_0001211g0160 Kinase associated domain 1 (KA1), Protein kinase, ATP binding site, Serine/threonine- / dual specificity protein kinase, catalytic domain, Serine/threonine-protein kinase, active site, Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote, Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal, UBA-like, Protein kinase domain, Protein kinase-like domain, KA1 domain/Ssp2 C-terminal domain Nitab4.5_0001211 + View
Nicotiana tabacum Nitab4.5_0000212g0130 Serine/threonine- / dual specificity protein kinase, catalytic domain, Protein kinase-like domain, Kinase associated domain 1 (KA1), Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal, Protein kinase, ATP binding site, Protein kinase domain, Serine/threonine-protein kinase, active site, Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote, KA1 domain/Ssp2 C-terminal domain Nitab4.5_0000212 - View
Nicotiana tabacum Nitab4.5_0002756g0100 Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal, KA1 domain/Ssp2 C-terminal domain, Serine/threonine- / dual specificity protein kinase, catalytic domain, Protein kinase domain, Kinase associated domain 1 (KA1), Protein kinase, ATP binding site, Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote, Serine/threonine-protein kinase, active site, Protein kinase-like domain, UBA-like Nitab4.5_0002756 + View
Olea europaea Oeu052461.1 chr18 + View
Petunia axillaris Peaxi162Scf00274g00343 CBL-interacting protein kinase 3 Peaxi162Scf00274 + View
Punica granatum PGR083G1119 NC_045133.1 - View
Papaver somniferum PSO478G5094 NC_039361.1 + View
Phaseolus vulgaris Phvul.004G032000 Chr04 - View
Quercus lobata QL02p084951 CM012294 - View
Rhododendron simsii Rhsim08G0151900 chr08 + View
Striga asiatica SGA_v2.0_scaffold4G02430 scaffold4 + View
Striga asiatica SGA_v2.0_scaffold313G48327 scaffold313 + View
Salix brachista Sabra04G0067800 GWHAAZH00000004 + View
Solanum lycopersicum Solyc03g115700.3 SNF1-related protein kinase SL4.0ch03 + View
Solanum lycopersicum Solyc02g067030.4 SNF1 SL4.0ch02 - View
Solanum pennellii Sopen03g034680 encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase | SNF1 kinase homolog 10 (KIN10) | FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity | INVOLVED IN: in 8 processes | LOCATED IN: nuclear ubiquitin ligase complex | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Ubiquitin-associated/translation elongation factor EF1B, N-terminal , Kinase-associated KA1 , Serine/threonine-protein kinase domain , Serine/threonine-protein kinase-like domain , Protein kinase-like domain , Serine/threonine-protein kinase, active site , Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote , Protein kinase, Snf1-like AMPK , Protein kinase, catalytic domain , Calcium/calmodulin-dependent protein kinase-like | BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 Spenn-ch03 + View
Solanum pennellii Sopen02g016220 encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase | SNF1 kinase homolog 10 (KIN10) | FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity | INVOLVED IN: in 8 processes | LOCATED IN: nuclear ubiquitin ligase complex | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Ubiquitin-associated/translation elongation factor EF1B, N-terminal , Kinase-associated KA1 , Serine/threonine-protein kinase domain , Serine/threonine-protein kinase-like domain , Protein kinase-like domain , Serine/threonine-protein kinase, active site , Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote , Protein kinase, Snf1-like AMPK , Protein kinase, catalytic domain , Calcium/calmodulin-dependent protein kinase-like | BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400024561 Ser/Thr protein kinase ST4.03ch03 + View
Trochodendron aralioides TAR371G0650 group13 - View
Tarenaya hassleriana THA.LOC104805487 SNF1-related protein kinase catalytic subunit alpha KIN11-like isoform X1 NW_010961290.1 - View
Tripterygium wilfordii TWI32G0614 NC_052254.1 + View
Vaccinium macrocarpon vmacro17575 Similar to KIN10: SNF1-related protein kinase catalytic subunit alpha KIN10 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01011467001 chr14 - View