Gene: Sopen02g016220

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g016220
  • Transcript Identifier Sopen02g016220.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 40394041-40403690 : negative

Gene Family Information

  • ID HOM05D000055
  • #Genes/#Species 4311/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g016220.1

Descriptions

  • Description encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase | SNF1 kinase homolog 10 (KIN10) | FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, protein kinase activity | INVOLVED IN: in 8 processes | LOCATED IN: nuclear ubiquitin ligase complex | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Ubiquitin-associated/translation elongation factor EF1B, N-terminal , Kinase-associated KA1 , Serine/threonine-protein kinase domain , Serine/threonine-protein kinase-like domain , Protein kinase-like domain , Serine/threonine-protein kinase, active site , Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote , Protein kinase, Snf1-like AMPK , Protein kinase, catalytic domain , Calcium/calmodulin-dependent protein kinase-like | BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 11
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009789
ISO
PLAZA Integrative Orthologypositive regulation of abscisic acid-activated signaling pathway AT3G01090
GO:0007165
ISO
PLAZA Homology (enrichment)signal transduction HOM05D000055
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT3G01090
GO:0080022
ISO
PLAZA Integrative Orthologyprimary root development AT3G01090
GO:0010050
ISO
PLAZA Integrative Orthologyvegetative phase change AT3G01090
GO:0009740
ISO
PLAZA Integrative Orthologygibberellic acid mediated signaling pathway Solyc02g067030.4
GO:0005982
ISO
PLAZA Integrative Orthologystarch metabolic process AT3G01090
GO:0010508
ISO
PLAZA Integrative Orthologypositive regulation of autophagy AT3G01090
GO:0009738
ISO
PLAZA Integrative Orthologyabscisic acid-activated signaling pathway Solyc02g067030.4
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT3G01090
GO:0009635
ISO
PLAZA Integrative Orthologyresponse to herbicide AT3G01090
GO:0006468
IEA
InterProprotein phosphorylation
GO:1902074
ISO
PLAZA Integrative Orthologyresponse to salt AT3G01090
GO:0009594
ISO
PLAZA Integrative Orthologydetection of nutrient AT3G01090
GO:0010182
ISO
PLAZA Integrative Orthologysugar mediated signaling pathway AT3G01090
GO:1900055
ISO
PLAZA Integrative Orthologyregulation of leaf senescence AT3G01090
GO:0046777
ISO
PLAZA Integrative Orthologyprotein autophosphorylation AT3G29160
GO:0003006
ISO
PLAZA Integrative Orthologydevelopmental process involved in reproduction AT3G01090
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT3G01090
GO:0009749
ISO
PLAZA Integrative Orthologyresponse to glucose AT3G01090
GO:0001666
ISO
PLAZA Integrative Orthologyresponse to hypoxia AT3G01090
GO:0099402
ISO
PLAZA Integrative Orthologyplant organ development AT3G01090
GO:0010353
ISO
PLAZA Integrative Orthologyresponse to trehalose AT3G29160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019902
ISO
PLAZA Integrative Orthologyphosphatase binding AT3G01090
GO:0004674
ISO
PLAZA Integrative Orthologyprotein serine/threonine kinase activity AT3G29160
GO:0019900
ISO
PLAZA Integrative Orthologykinase binding AT3G29160
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G29160
GO:0016301
ISO
PLAZA Integrative Orthologykinase activity AT3G01090
GO:0005524
IEA
InterProATP binding
GO:0004672
IEA
InterProprotein kinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G29160
GO:0000152
ISO
PLAZA Integrative Orthologynuclear ubiquitin ligase complex AT3G01090
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G29160
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G01090
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G29160
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G01090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028375 KA1 domain/Ssp2, C-terminal
IPR000719 Protein kinase domain
IPR001772 Kinase associated domain 1 (KA1)
IPR011009 Protein kinase-like domain superfamily
IPR015940 Ubiquitin-associated domain
Mapman id Description
18.4.5.1.1 Protein modification.phosphorylation.CAMK protein kinase superfamily.SNF1-related SnRK1 kinase complex.catalytic subunit alpha
27.3.1.1 Multi-process regulation.SnRK1-kinase regulatory system.SnRK1 protein kinase complex.catalytic subunit alpha