Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0042702 PREDICTED: heterogeneous nuclear ribonucleoprotein R [Sesamum indicum] Chr10 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G7710 LG-10 + View
Acer truncatum Atru.chr8.1485 chr8 + View
Actinidia chinensis Actinidia31267 Lachesis_group20 + View
Arabidopsis lyrata AL5G33430 scaffold_5 + View
Avicennia marina MSTRG.10372 ScioBoG_13798_HRSCAF_13862 - View
Amaranthus hybridus Ah.15g090830 AmaHy_arrow1_Scaffold_15 + View
Aquilegia oxysepala Aqoxy4G02765 CHR04 + View
Aquilegia oxysepala Aqoxy2G01132 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TJRX0G KOG0117//KOG0123 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) // Polyadenylate-binding protein (RRM superfamily) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AJL8C7 KOG0117//KOG0123 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) // Polyadenylate-binding protein (RRM superfamily) arahy.Tifrunner.gnm1.Arahy.06 - View
Arabidopsis thaliana AT3G52660 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2)%3B Has 39411 Blast hits to 22154 proteins in 1003 species: Archae - 84%3B Bacteria - 1991%3B Metazoa - 19033%3B Fungi - 3968%3B Plants - 4828%3B Viruses - 731%3B Other Eukaryotes - 8776 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB01g00350 ChrB01 - View
Brassica carinata BcaB02g07822 ChrB02 - View
Brassica carinata BcaC07g39632 ChrC07 + View
Brassica napus A09p45730 A09 + View
Brassica napus C08p27950 C08 + View
Brassica oleracea BolC8t50407H C8 + View
Beta vulgaris EL10Ac7g16906 K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) Chr7_EL10_PGA_scaffold5 + View
Cannabis sativa CANSAT64G0757 NC_044379.1 - View
Cicer arietinum L. Ca_09012_v3 Ca_LG3_v3 - View
Corylus avellana Haze_19624 Similar to LIF2: Heterogeneous nuclear ribonucleoprotein Q (Arabidopsis thaliana OX%3D3702) 10 - View
Corylus avellana Haze_23362 Similar to LIF2: Heterogeneous nuclear ribonucleoprotein Q (Arabidopsis thaliana OX%3D3702) 6 + View
Coffea canephora Cc01_g09070 RNA-binding (RRM/RBD/RNP motifs) family protein chr1 + View
Coffea canephora Cc06_g05930 RNA-binding (RRM/RBD/RNP motifs) family protein chr6 - View
Citrus clementina Ciclev10011562m.g scaffold_6 + View
Citrus clementina Ciclev10028342m.g scaffold_8 + View
Ceratophyllum demersum CDE06G2814 4 + View
Carpinus fangiana Cfa010010 Cfa04 + View
Carpinus fangiana Cfa016619 Cfa07 - View
Cardamine hirsuta CARHR162480 RNA-binding protein Chr5 + View
Carya illinoinensis CiPaw.10G010600 K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) Chr10 - View
Carya illinoinensis CiPaw.14G099700 K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) Chr14 + View
Carya illinoinensis CiPaw.13G135300 KOG0131 - Splicing factor 3b, subunit 4 Chr13 + View
Corchorus olitorius COL.COLO4_29717 hypothetical protein AWUE01020396.1 + View
Carica papaya Cpa.g.sc5.9 supercontig_5 + View
Chenopodium quinoa AUR62006192 Syncrip: Heterogeneous nuclear ribonucleoprotein Q C_Quinoa_Scaffold_1001 - View
Chenopodium quinoa AUR62037030 Syncrip: Heterogeneous nuclear ribonucleoprotein Q C_Quinoa_Scaffold_1847 + View
Capsella rubella Carub.0005s1907 scaffold_5 + View
Daucus carota DCAR_013396 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv31695 GWHABJS00000015 - View
Davidia involucrata Dinv21198 GWHABJS00000021 + View
Durio zibethinus Duzib106G1456 NW_019168492.1 + View
Durio zibethinus Duzib170G0866 NW_019167871.1 + View
Eucalyptus grandis Eucgr.B03847 Chr02 + View
Erythranthe guttata Migut.L01787 scaffold_12 - View
Eutrema salsugineum Thhalv10010358m.g K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) scaffold_16 - View
Fragaria x ananassa FAN16G2633 K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) Fvb3-3 - View
Fragaria x ananassa FAN02G0207 KOG0110//KOG0131//KOG0145//KOG0146 - RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ELAV/HU (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) Fvb6-4 - View
Fragaria x ananassa FAN05G0160 KOG0110//KOG0131//KOG0145 - RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ELAV/HU (RRM superfamily) Fvb6-3 + View
Fragaria vesca FvH4_6g18900 KOG0117//KOG0144//KOG0148 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) Fvb6 - View
Gossypium hirsutum Gohir.A04G062100 K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) A04 - View
Gossypium hirsutum Gohir.D01G195100 K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) D01 + View
Gossypium hirsutum Gohir.D04G098900 KOG0110//KOG0117//KOG0131//KOG0149 - RNA-binding protein (RRM superfamily) // Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) // Splicing factor 3b, subunit 4 // Predicted RNA-binding protein SEB4 (RRM superfamily) D04 + View
Gossypium hirsutum Gohir.A01G205600 KOG0110//KOG0131//KOG0145 - RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ELAV/HU (RRM superfamily) A01 + View
Glycine max Glyma.03G196700 KOG0110//KOG0123//KOG0131 - RNA-binding protein (RRM superfamily) // Polyadenylate-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 Gm03 - View
Glycine max Glyma.19G194971 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Gm19 - View
Gossypium raimondii Gorai.009G401300 Chr09 + View
Gossypium raimondii Gorai.002G239200 Chr02 + View
Lupinus albus Lalb_Chr20g0111671 K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) Lalb_Chr20 + View
Lotus japonicus Lj1g0005537 PF00076//PF00656 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Caspase domain (Peptidase_C14) chr1 - View
Lonicera japonica Lj2C138T5 GWHAAZE00000002 - View
Malus domestica MD11G1164700 RNA-binding (RRM/RBD/RNP motifs) family protein Chr11 - View
Malus domestica MD14G1023900 RNA-binding (RRM/RBD/RNP motifs) family protein Chr14 - View
Malus domestica MD12G1025200 RNA-binding (RRM/RBD/RNP motifs) family protein Chr12 - View
Manihot esculenta Manes.08G026200 Chromosome08 - View
Manihot esculenta Manes.09G054400 Chromosome09 + View
Medicago truncatula Medtr7g104800 RNA recognition motif, a.k.a. RRM, RBD protein chr7 - View
Nelumbo nucifera Nn2g14174 chr2 - View
Nicotiana tabacum Nitab4.5_0000692g0070 RNA recognition motif domain, RNA recognition motif domain, eukaryote, Nucleotide-binding, alpha-beta plait Nitab4.5_0000692 - View
Olea europaea Oeu017684.1 chr17 - View
Petunia axillaris Peaxi162Scf00404g00217 RNA-binding (RRM/RBD/RNP motifs) family protein Peaxi162Scf00404 + View
Prunus persica Prupe.6G130600 Pp06 - View
Prunus persica Prupe.7G108900 Pp07 + View
Pisum sativum Psat3g032360 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr3LG5 + View
Papaver somniferum PSO339G2576 NC_039366.1 + View
Papaver somniferum PSO384G1112 NC_039368.1 - View
Papaver somniferum PSO384G0789 NC_039368.1 + View
Populus trichocarpa Potri.006G212400 K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) Chr06 + View
Populus trichocarpa Potri.016G079200 KOG0110//KOG0131//KOG0148 - RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) Chr16 + View
Phaseolus vulgaris Phvul.001G190900 KOG0131//KOG4205 - Splicing factor 3b, subunit 4 // RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 Chr01 - View
Quercus lobata QL07p038668 7 + View
Rosa chinensis RcHm_v2.0_Chr3g0473891 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim03G0074600 chr03 + View
Striga asiatica SGA_v2.0_scaffold35G14058 scaffold35 + View
Striga asiatica SGA_v2.0_scaffold184G39970 scaffold184 - View
Salix brachista Sabra06G0163500 GWHAAZH00000006 + View
Salix brachista Sabra16G0084300 GWHAAZH00000016 + View
Simmondsia chinensis Sc02g0000300 GWHAASQ00000002 - View
Solanum lycopersicum Solyc09g009890.4 heterogeneous nuclear ribonucleoprotein R isoform X1 (AHRD V3.3 *** A0A2I4DTZ7_9ROSI) SL4.0ch09 - View
Schrenkiella parvula Sp5g09640 K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) ch5-1 - View
Solanum pennellii Sopen09g004640 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400008877 Nucleolar phosphoprotein ST4.03ch09 + View
Selenicereus undatus Hund19923 Scaffold_33673 + View
Trochodendron aralioides TAR636G0288 group1 - View
Trochodendron aralioides TAR633G0898 group2 + View
Theobroma cacao Thecc.09G282600 RNA-binding family protein Chromosome_9 + View
Theobroma cacao Thecc.05G090400 RNA-binding family protein Chromosome_5 - View
Tarenaya hassleriana THA.LOC104804892 heterogeneous nuclear ribonucleoprotein R NW_010960187.1 + View
Trifolium pratense TPR.G23326 Tp57577_TGAC_v2_LG6 + View
Trifolium pratense TPR.G17204 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI74G1254 NC_052234.1 - View
Tripterygium wilfordii TWI79G0697 NC_052238.1 - View
Vaccinium macrocarpon vmacro07412 Similar to LIF2: Heterogeneous nuclear ribonucleoprotein Q (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G3019 CM024070.1 - View
Vitis vinifera GSVIVG01036119001 chr6 - View
Vitis vinifera GSVIVG01033857001 chr8 + View