Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0023840 PREDICTED: ras-related protein Rab7 [Nicotiana tomentosiformis] Chr4 + View
CSS0006980 PREDICTED: ras-related protein Rab7-like [Malus domestica] Contig1276 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G6690 LG-7 + View
Acer truncatum Atru.chr13.1973 chr13 + View
Actinidia chinensis Actinidia24635 Lachesis_group27 + View
Actinidia chinensis Actinidia15619 Lachesis_group28 + View
Actinidia chinensis Actinidia01375 Lachesis_group8 - View
Actinidia chinensis Actinidia29558 Lachesis_group7 + View
Actinidia chinensis Actinidia17759 Lachesis_group26 + View
Arabidopsis lyrata AL1G36280 scaffold_1 + View
Arabidopsis lyrata AL6G43340 scaffold_6 + View
Avicennia marina MSTRG.22115 ScioBoG_3008_HRSCAF_3015 - View
Avicennia marina MSTRG.24488 ScioBoG_4088_HRSCAF_4107 + View
Aquilegia oxysepala Aqoxy6G00448 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.S1PHE2 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1JN7SV PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9YN93R K07897 - Ras-related protein Rab-7A (RAB7A) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8KJM5C K07897 - Ras-related protein Rab-7A (RAB7A) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT1G22740 RAB GTPase homolog G3B GTP-binding protein Rab7 RAB GTPase homolog G3B (RABG3B)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: intracellular protein transport%2C signal transduction%2C nucleocytoplasmic transport%2C protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: vacuole%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Ran GTPase (InterPro:IPR002041)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Ras type (InterPro:IPR003577)%2C Small GTPase%2C Rho type (InterPro:IPR003578)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Ras GTPase (InterPro:IPR001806)%2C Small GTPase (InterPro:IPR020851)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3A (TAIR:AT4G09720.1)%3B Has 25691 Blast hits to 25666 proteins in 724 species: Archae - 21%3B Bacteria - 135%3B Metazoa - 13533%3B Fungi - 3489%3B Plants - 2837%3B Viruses - 20%3B Other Eukaryotes - 5656 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR1120G188 AmTr_v1.0_scaffold00078 + View
Brassica carinata BcaC01g04704 ChrC01 - View
Brassica napus A03p28710 A03 + View
Brassica napus C03p34720 C03 + View
Brassica rapa BraA03t12070Z A03 + View
Beta vulgaris EL10Ac1g01629 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Chr1_EL10_PGA_scaffold3 - View
Cannabis sativa CANSAT25G3679 NC_044370.1 - View
Cicer arietinum L. Ca_10646_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_17691_v3 Ca_LG6_v3 - View
Corylus avellana Haze_17827 Similar to Ras-related protein Rab7 (Glycine max OX%3D3847) 7 - View
Coffea canephora Cc07_g16410 Ras-related protein Rab7 chr7 + View
Coffea canephora Cc10_g06410 Ras-related protein Rab7 chr10 + View
Citrus clementina Ciclev10002522m.g scaffold_5 - View
Carpinus fangiana Cfa018261 Cfa07 + View
Cardamine hirsuta CARHR023100 Ras-related protein Rab-7a Chr1 + View
Carya illinoinensis CiPaw.16G007300 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Chr16 + View
Carya illinoinensis CiPaw.03G133400 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Chr03 - View
Carya illinoinensis CiPaw.04G090800 PTHR24073:SF589 - RAS-RELATED PROTEIN RABG3B-RELATED Chr04 - View
Citrullus lanatus ClCG02G000960 Ras-related protein Rab-7a CG_Chr02 - View
Carica papaya Cpa.g.sc26.123 supercontig_26 - View
Chenopodium quinoa AUR62026614 Ras-related protein Rab7 C_Quinoa_Scaffold_2081 + View
Chenopodium quinoa AUR62034920 Ras-related protein Rab7 C_Quinoa_Scaffold_3617 - View
Capsella rubella Carub.0006s2819 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A scaffold_6 + View
Capsella rubella Carub.0001s2225 PTHR24073:SF589 - RAS-RELATED PROTEIN RABG3B-RELATED scaffold_1 + View
Daucus carota DCAR_001377 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv02473 GWHABJS00000011 - View
Durio zibethinus Duzib187G0535 NW_019167860.1 - View
Durio zibethinus Duzib116G0673 NW_019167949.1 - View
Durio zibethinus Duzib041G0271 NW_019167826.1 - View
Durio zibethinus Duzib093G1702 NW_019167937.1 - View
Erigeron canadensis ECA247G3517 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.I00315 Chr09 - View
Eucalyptus grandis Eucgr.F04166 Chr06 - View
Erythranthe guttata Migut.L00066 scaffold_12 - View
Erythranthe guttata Migut.N02942 scaffold_14 + View
Fragaria x ananassa FAN24G2295 K07897 - Ras-related protein Rab-7A (RAB7A) Fvb2-2 + View
Fragaria x ananassa FAN27G2936 K07897 - Ras-related protein Rab-7A (RAB7A) Fvb2-1 - View
Fragaria x ananassa FAN15G2628 PTHR24073//PTHR24073:SF586 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABG3A Fvb2-4 - View
Fragaria vesca FvH4_2g12800 PTHR24073//PTHR24073:SF586 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABG3A Fvb2 - View
Gossypium hirsutum Gohir.A10G081000 PTHR24073//PTHR24073:SF502 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABG3D A10 + View
Gossypium hirsutum Gohir.A05G247000 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A A05 - View
Gossypium hirsutum Gohir.A05G271500 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A A05 - View
Gossypium hirsutum Gohir.A02G062000 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A A02 + View
Gossypium hirsutum Gohir.D05G273700 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A D05 - View
Gossypium hirsutum Gohir.D05G248500 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A D05 - View
Glycine max Glyma.05G184600 PTHR24073//PTHR24073:SF462//PTHR24073:SF589 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABG1-RELATED // RAS-RELATED PROTEIN RABG3B-RELATED Gm05 + View
Glycine max Glyma.08G142600 PTHR24073//PTHR24073:SF462 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABG1-RELATED Gm08 + View
Glycine max Glyma.20G171600 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Gm20 - View
Glycine max Glyma.10G220100 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Gm10 + View
Gossypium raimondii Gorai.009G286800 Chr09 - View
Gossypium raimondii Gorai.005G076500 Chr05 + View
Gossypium raimondii Gorai.009G259500 Chr09 - View
Hydrangea macrophylla Hma1.2p1_0276F.1_g110960 Hma1.2p1_0276F.1 - View
Lupinus albus Lalb_Chr03g0035731 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Lalb_Chr03 - View
Lupinus albus Lalb_Chr19g0129961 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Lalb_Chr19 + View
Lotus japonicus Lj5g0010565 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A chr5 - View
Lotus japonicus Lj2g0009740 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A chr2 - View
Lotus japonicus Lj4g0015266 PTHR24073//PTHR24073:SF462 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABG1-RELATED chr4 - View
Lonicera japonica Lj2A567T20 GWHAAZE00000002 + View
Lonicera japonica Lj7C386T22 GWHAAZE00000007 - View
Lonicera japonica Lj4A705T44 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_6_101001 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Lsat_1_v8_lg_6 - View
Malus domestica MD10G1038200 RAB GTPase homolog G3A Chr10 + View
Manihot esculenta Manes.12G143600 Chromosome12 + View
Manihot esculenta Manes.02G185501 Chromosome02 - View
Manihot esculenta Manes.18G096300 Chromosome18 - View
Medicago truncatula Medtr8g092020 RAB GTPase-like protein A1D chr8 + View
Medicago truncatula Medtr1g097420 RAB GTPase-like protein A1D chr1 + View
Nicotiana tabacum Nitab4.5_0000872g0180 Small GTPase superfamily, Rab type, Small GTP-binding protein domain, Small GTPase superfamily, Small GTPase superfamily, Rho type, Small GTPase superfamily, Ras type, P-loop containing nucleoside triphosphate hydrolase, Ran GTPase Nitab4.5_0000872 - View
Olea europaea Oeu046072.2 chr14 + View
Prunus persica Prupe.8G044200 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Pp08 + View
Prunus persica Prupe.6G169600 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Pp06 - View
Pisum sativum Psat6g189480 Ras family chr6LG2 + View
Populus trichocarpa Potri.007G079700 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Chr07 - View
Populus trichocarpa Potri.005G085300 PTHR24073//PTHR24073:SF462 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABG1-RELATED Chr05 + View
Populus trichocarpa Potri.002G062400 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Chr02 + View
Populus trichocarpa Potri.005G198800 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Chr05 - View
Phaseolus vulgaris Phvul.007G085200 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A Chr07 - View
Phaseolus vulgaris Phvul.002G265500 PTHR24073:SF462 - RAS-RELATED PROTEIN RABG1-RELATED Chr02 + View
Quercus lobata QL02p036438 CM012294 + View
Quercus lobata QL06p031820 6 - View
Rosa chinensis RcHm_v2.0_Chr6g0273691 RcHm_v2.0_Chr6 - View
Striga asiatica SGA_v2.0_scaffold47G17702 scaffold47 - View
Salvia bowleyana SalBow6G6003 GWHASIU00000002 - View
Salix brachista Sabra02G0050400 GWHAAZH00000002 + View
Salix brachista Sabra05G0070200 GWHAAZH00000005 + View
Simmondsia chinensis Sc02g0003750 GWHAASQ00000002 + View
Solanum lycopersicum Solyc04g072060.4 Ras-related protein (AHRD V3.3 *** A0A2U1L351_ARTAN) SL4.0ch04 - View
Solanum lycopersicum Solyc04g051680.4 Ras GTPase (AHRD V3.3 *** K2SFN1_MACPH) SL4.0ch04 - View
Schrenkiella parvula Sp1g20250 PTHR24073//PTHR24073:SF586 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABG3A ch1-1 + View
Schrenkiella parvula Sp6g07900 PTHR24073:SF586 - RAS-RELATED PROTEIN RABG3A ch6-2 - View
Solanum pennellii Sopen04g028230 Ras-related protein Rab7 - Glycine max (Soybean), RAB GTPase homolog G3A (RABG3A) | FUNCTIONS IN: GTP binding, GTPase activity | INVOLVED IN: intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Ran GTPase , Ras , Ras small GTPase, Ras type , Small GTPase, Rho type , Ras GTPase , Small GTP-binding protein , Small GTPase , Ras small GTPase, Rab type | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3B . Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400031141 Nt-rab7c protein ST4.03ch04 - View
Selenicereus undatus Hund26671 Scaffold_2055 + View
Trochodendron aralioides TAR625G0516 group4 - View
Theobroma cacao Thecc.01G114800 RAB GTPase G3A Chromosome_1 + View
Theobroma cacao Thecc.08G163800 RAB GTPase G3A Chromosome_8 - View
Tarenaya hassleriana THA.LOC104800096 ras-related protein Rab7 NW_010969032.1 - View
Tarenaya hassleriana THA.LOC104816098 ras-related protein RABG3a NW_010960187.1 - View
Trifolium pratense TPR.G17036 Tp57577_TGAC_v2_LG1 - View
Trifolium pratense TPR.G16191 Tp57577_TGAC_v2_LG2 + View
Trifolium pratense TPR.G2244 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI79G0948 NC_052238.1 - View
Vaccinium macrocarpon vmacro18640 Similar to Ras-related protein Rab7 (Glycine max OX%3D3847) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro01505 Similar to Ras-related protein Rab7 (Glycine max OX%3D3847) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G3268 CM024069.1 + View
Vigna mungo VMungo0720G0987 CM024071.1 + View
Vitis vinifera GSVIVG01013686001 chr18_random + View
Vitis vinifera GSVIVG01022246001 chr7 + View