Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0016938 PREDICTED: zinc finger CCCH domain-containing protein 3 [Vitis vinifera] Chr7 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G4590 LG-5 - View
Acer truncatum Atru.chr6.3267 chr6 + View
Actinidia chinensis Actinidia03591 Lachesis_group9 - View
Actinidia chinensis Actinidia10793 Lachesis_group15 - View
Arabidopsis lyrata AL1G14730 scaffold_1 - View
Arabidopsis lyrata AL4G28450 scaffold_4 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JQ68ST PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED arahy.Tifrunner.gnm1.Arahy.17 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q92UBX PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED arahy.Tifrunner.gnm1.Arahy.07 + View
Arabidopsis thaliana AT1G04990 Zinc finger C-x8-C-x5-C-x3-H type family protein Zinc finger C-x8-C-x5-C-x3-H type family protein%3B FUNCTIONS IN: zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%3B BEST Arabidopsis thaliana protein match is: zinc finger nuclease 2 (TAIR:AT2G32930.1)%3B Has 1789 Blast hits to 1100 proteins in 186 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 576%3B Fungi - 244%3B Plants - 789%3B Viruses - 0%3B Other Eukaryotes - 180 (source: NCBI BLink). Zinc finger C-x8-C-x5-C-x3-H type family protein%3B FUNCTIONS IN: zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%3B BEST Arabidopsis thaliana protein match is: zinc finger nuclease 2 (TAIR:AT2G32930.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT2G32930 zinc finger nuclease 2 Encodes a zinc finger protein. zinc finger nuclease 2 (ZFN2)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%3B BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G04990.1)%3B Has 1502 Blast hits to 1018 proteins in 167 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 453%3B Fungi - 164%3B Plants - 727%3B Viruses - 0%3B Other Eukaryotes - 156 (source: NCBI BLink). zinc finger nuclease 2 (ZFN2)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%3B BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT1G04990.1). Chr2 - View
Brassica carinata BcaC01g05873 ChrC01 - View
Brassica napus C05p03180 C05 - View
Brassica napus A10p03470 A10 - View
Brassica napus C04p16630 C04 + View
Brassica oleracea BolC5t29098H C5 - View
Brassica rapa BraA10t42623Z A10 - View
Beta vulgaris EL10Ac9g22822 PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Chr9_EL10_PGA_scaffold8 - View
Cicer arietinum L. Ca_06055_v3 Ca_LG2_v3 - View
Corylus avellana Haze_12757 Similar to At1g04990: Zinc finger CCCH domain-containing protein 3 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc05_g02720 Putative Zinc finger CCCH domain-containing protein 3 chr5 - View
Citrus clementina Ciclev10015215m.g scaffold_2 + View
Carpinus fangiana Cfa014309 Cfa06 - View
Cardamine hirsuta CARHR004410 Zinc finger CCCH domain-containing protein 26 Chr1 - View
Cardamine hirsuta CARHR126860 Zinc finger CCCH domain-containing protein 26 Chr4 - View
Carya illinoinensis CiPaw.04G109400 PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Chr04 - View
Carya illinoinensis CiPaw.03G154300 PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Chr03 - View
Citrullus lanatus ClCG02G018110 Zinc finger CCCH domain-containing protein CG_Chr02 + View
Cucumis melo MELO3C019730.2 zinc finger CCCH domain-containing protein 3-like chr11 + View
Capsella rubella Carub.0001s0424 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED scaffold_1 - View
Capsella rubella Carub.0004s1436 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED scaffold_4 - View
Cucumis sativus L. CsaV3_6G015470 zinc finger CCCH domain-containing protein 3-like chr6 + View
Daucus carota DCAR_012917 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_019255 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv39758 GWHABJS00000001 + View
Davidia involucrata Dinv08711 GWHABJS00000013 - View
Durio zibethinus Duzib138G0246 NW_019167893.1 - View
Durio zibethinus Duzib211G0431 NW_019168049.1 - View
Erigeron canadensis ECA240G1663 Conyza_canadensis_scaffold:5 + View
Erythranthe guttata Migut.H01247 scaffold_8 + View
Eutrema salsugineum Thhalv10016979m.g PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED scaffold_10 - View
Eutrema salsugineum Thhalv10007912m.g PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED scaffold_5 + View
Fragaria x ananassa FAN09G0511 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Fvb6-2 + View
Fragaria x ananassa FAN02G1058 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Fvb6-4 - View
Fragaria x ananassa FAN05G0912 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Fvb6-3 + View
Fragaria x ananassa FAN14G0348 PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Fvb6-1 - View
Fragaria vesca FvH4_6g42010 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Fvb6 - View
Gossypium hirsutum Gohir.A07G084900 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED A07 + View
Gossypium hirsutum Gohir.D07G090400 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED D07 + View
Glycine max Glyma.14G050000 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Gm14 + View
Glycine max Glyma.02G267500 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Gm02 - View
Gossypium raimondii Gorai.001G096900 Chr01 + View
Lupinus albus Lalb_Chr10g0105551 PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Lalb_Chr10 - View
Lupinus albus Lalb_Chr04g0250111 PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Lalb_Chr04 + View
Lupinus albus Lalb_Chr17g0347221 PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Lalb_Chr17 - View
Lotus japonicus LjContig00029g0004690 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Contig00029 + View
Lonicera japonica Lj1A783T51 GWHAAZE00000001 + View
Lonicera japonica Lj8C130T9 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_7_95260 Lsat_1_v8_lg_7 - View
Lactuca sativa Lsat_1_v5_gn_9_106160 PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Lsat_1_v8_lg_9 - View
Malus domestica MD17G1107000 Zinc finger C-x8-C-x5-C-x3-H type family protein Chr17 + View
Malus domestica MD09G1115400 Zinc finger C-x8-C-x5-C-x3-H type family protein Chr09 + View
Manihot esculenta Manes.12G069000 Chromosome12 + View
Manihot esculenta Manes.13G065500 Chromosome13 + View
Medicago truncatula Medtr5g085200 zinc finger CCCH domain protein chr5 - View
Nelumbo nucifera Nn1g03365 chr1 - View
Nelumbo nucifera Nn1g07315 chr1 + View
Prunus persica Prupe.3G209200 PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Pp03 - View
Papaver somniferum PSO832G1473 NC_039367.1 - View
Papaver somniferum PSO210G7315 NC_039359.1 - View
Populus trichocarpa Potri.014G159500 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Chr14 + View
Populus trichocarpa Potri.002G223700 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED Chr02 - View
Phaseolus vulgaris Phvul.008G214600 Chr08 + View
Quercus lobata QL08p030366 8 - View
Rosa chinensis RcHm_v2.0_Chr2g0157941 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim06G0168600 chr06 + View
Rhododendron simsii Rhsim04G0047500 chr04 + View
Salix brachista Sabra14G0121200 GWHAAZH00000014 + View
Salix brachista Sabra02G0171300 GWHAAZH00000002 - View
Sechium edule Sed0003283 LG05 + View
Sechium edule Sed0021353 LG01 + View
Schrenkiella parvula Sp1g03870 PTHR12506:SF24 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED ch1-1 - View
Schrenkiella parvula Sp4g15290 PTHR12506//PTHR12506:SF24 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26-RELATED ch4-6 - View
Trochodendron aralioides TAR627G0456 group6 + View
Trochodendron aralioides TAR624G0774 group9 + View
Trochodendron aralioides TAR629G3127 group0 - View
Theobroma cacao Thecc.01G183400 Zinc finger C-x8-C-x5-C-x3-H type family protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104801012 zinc finger CCCH domain-containing protein 3-like NW_010969548.1 + View
Tripterygium wilfordii TWI36G0270 NC_052237.1 + View
Tripterygium wilfordii TWI75G1597 NC_052253.1 + View
Vaccinium macrocarpon vmacro12156 Similar to ZFN1: Zinc finger CCCH domain-containing protein 33 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro09369 Similar to At1g04990: Zinc finger CCCH domain-containing protein 3 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G0042 CM024073.1 - View
Vitis vinifera GSVIVG01030514001 chr12 + View