Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G3090 LG-11 + View
Aethionema arabicum Aa31LG3G8630 LG-3 + View
Acer truncatum Atru.chr1.470 chr1 - View
Actinidia chinensis Actinidia32866 Lachesis_group22 - View
Arabidopsis lyrata AL6G35010 scaffold_6 + View
Arabidopsis lyrata AL8G26630 scaffold_8 + View
Avicennia marina MSTRG.8454 ScioBoG_102841_HRSCAF_103114 + View
Avicennia marina MSTRG.27118 ScioBoG_8578_HRSCAF_8617 - View
Arabidopsis thaliana AT5G52250 Transducin/WD40 repeat-like superfamily protein Encodes a transducin protein whose gene expression is induced by UV-B. This induction is reduced in hy5 mutant and may be a target of HY5 during UV-B response. Functions as a repressor of UV-B signaling. Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G23730.1)%3B Has 19305 Blast hits to 12811 proteins in 562 species: Archae - 16%3B Bacteria - 3753%3B Metazoa - 6674%3B Fungi - 4562%3B Plants - 2007%3B Viruses - 0%3B Other Eukaryotes - 2293 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT5G23730 Transducin/WD40 repeat-like superfamily protein Encodes REPRESSOR OF UV-B PHOTOMORPHOGENESIS 2 (RUP2). Functions as a repressor of UV-B signaling. Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat (InterPro:IPR001680)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G52250.1)%3B Has 12290 Blast hits to 8463 proteins in 487 species: Archae - 16%3B Bacteria - 2654%3B Metazoa - 3890%3B Fungi - 2899%3B Plants - 1307%3B Viruses - 0%3B Other Eukaryotes - 1524 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB01g04194 ChrB01 + View
Brassica carinata BcaC01g06174 ChrC01 + View
Brassica napus A03p15770 A03 - View
Brassica napus C03p18440 C03 - View
Brassica oleracea BolC3t14241H C3 - View
Brassica rapa BraA09t36328Z A09 - View
Brassica rapa BraA03t10867Z A03 - View
Corylus avellana Haze_13723 Similar to RUP2: WD repeat-containing protein RUP2 (Arabidopsis thaliana OX%3D3702) 5 - View
Citrus clementina Ciclev10005222m.g scaffold_9 + View
Carpinus fangiana Cfa008312 Cfa03 + View
Cardamine hirsuta CARHR265220 WD-40 repeat protein Chr8 + View
Cardamine hirsuta CARHR189800 Ubiquitin ligase protein cop1, putative Chr6 - View
Carya illinoinensis CiPaw.03G105600 K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) Chr03 + View
Carica papaya Cpa.g.sc107.44 supercontig_107 + View
Capsella rubella Carub.0008s1234 KOG0265//KOG1332 - U5 snRNP-specific protein-like factor and related proteins // Vesicle coat complex COPII, subunit SEC13 scaffold_8 + View
Capsella rubella Carub.0006s2148 K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) scaffold_6 + View
Daucus carota DCAR_018192 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv28449 GWHABJS00000004 - View
Erigeron canadensis ECA232G2956 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.K00249 Chr11 + View
Erythranthe guttata Migut.F00348 scaffold_6 - View
Erythranthe guttata Migut.F01124 scaffold_6 - View
Eutrema salsugineum Thhalv10005519m.g K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) scaffold_6 + View
Eutrema salsugineum Thhalv10015606m.g KOG0641 - WD40 repeat protein scaffold_2 - View
Fragaria x ananassa FAN06G2184 PTHR22847//PTHR22847:SF430 - WD40 REPEAT PROTEIN // MZB10.11 PROTEIN-RELATED Fvb7-2 + View
Fragaria x ananassa FAN10G2450 KOG0296//KOG0315//KOG0645 - Angio-associated migratory cell protein (contains WD40 repeats) // G-protein beta subunit-like protein (contains WD40 repeats) // WD40 repeat protein Fvb7-1 + View
Fragaria x ananassa FAN06G4762 PTHR22847//PTHR22847:SF430 - WD40 REPEAT PROTEIN // MZB10.11 PROTEIN-RELATED Fvb7-2 + View
Fragaria vesca FvH4_7g29370 PTHR22847:SF430 - MZB10.11 PROTEIN-RELATED Fvb7 + View
Helianthus annuus HanXRQChr09g0253511 Probable transducin/WD40 repeat-like superfamily protein HanXRQChr09 + View
Helianthus annuus HanXRQChr15g0495571 Putative WD40/YVTN repeat-like-containing domain HanXRQChr15 - View
Lonicera japonica Lj1P996T30 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_55081 KOG0265//KOG0313 - U5 snRNP-specific protein-like factor and related proteins // Microtubule binding protein YTM1 (contains WD40 repeats) Lsat_1_v8_lg_9 + View
Magnolia biondii MBI18_g09767_MAGBIO AED:0.01 Chr18 + View
Malus domestica MD01G1199700 Transducin/WD40 repeat-like superfamily protein Chr01 + View
Malus domestica MD07G1267700 Transducin/WD40 repeat-like superfamily protein Chr07 + View
Manihot esculenta Manes.06G146500 Chromosome06 + View
Nelumbo nucifera Nn1g01438 chr1 + View
Olea europaea Oeu062752.1 chr12 - View
Punica granatum PGR142G4059 NC_045128.1 - View
Prunus persica Prupe.2G293400 K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) Pp02 + View
Papaver somniferum PSO782G0794 NC_039365.1 + View
Papaver somniferum PSO478G1968 NC_039361.1 + View
Populus trichocarpa Potri.015G143200 K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) Chr15 + View
Populus trichocarpa Potri.012G140200 K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) Chr12 + View
Quercus lobata QL09p014359 9 - View
Rosa chinensis RcHm_v2.0_Chr1g0377161 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim03G0180200 chr03 + View
Striga asiatica SGA_v2.0_scaffold60G21027 scaffold60 + View
Salvia bowleyana SalBow4G1597 GWHASIU00000008 - View
Salvia bowleyana SalBow2G2597 GWHASIU00000007 - View
Salix brachista Sabra15G0152900 GWHAAZH00000015 + View
Salix brachista Sabra12G0105200 GWHAAZH00000012 + View
Sechium edule Sed0022159 LG01 + View
Schrenkiella parvula Sp2g23490 K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) ch2-4 - View
Schrenkiella parvula Sp6g14500 KOG0265//KOG0641 - U5 snRNP-specific protein-like factor and related proteins // WD40 repeat protein ch6-6 + View
Trochodendron aralioides TAR629G2342 group0 + View
Tripterygium wilfordii TWI14G0609 NC_052249.1 + View
Tripterygium wilfordii TWI39G0522 NC_052250.1 + View
Vaccinium macrocarpon vmacro06687 Similar to RUP2: WD repeat-containing protein RUP2 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01028986001 chr16 + View