Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0000305 PREDICTED: zinc finger protein NUTCRACKER [Vitis vinifera] Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G18860 LG-4 + View
Aethionema arabicum Aa31LG1G15270 LG-1 - View
Acer truncatum Atru.chr13.517 chr13 + View
Acer truncatum Atru.chr3.544 chr3 - View
Actinidia chinensis Actinidia19170 Lachesis_group8 + View
Actinidia chinensis Actinidia12112 Lachesis_group11 - View
Arabidopsis lyrata AL5G30860 scaffold_5 + View
Avicennia marina MSTRG.23546 ScioBoG_3895_HRSCAF_3912 + View
Amaranthus hybridus Ah.03g139340 AmaHy_arrow1_Scaffold_3 - View
Aquilegia oxysepala Aqoxy5G01679 CHR05 + View
Aquilegia oxysepala Aqoxy6G01045 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T5C9EA PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.V8NH83 PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT3G50700 indeterminate(ID)-domain 2 zinc finger protein%2C similar to maize Indeterminate1 (ID1) indeterminate(ID)-domain 2 (IDD2)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%2C Zinc finger%2C double-stranded RNA binding (InterPro:IPR022755)%3B BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT5G66730.1)%3B Has 54862 Blast hits to 20312 proteins in 388 species: Archae - 0%3B Bacteria - 661%3B Metazoa - 50262%3B Fungi - 473%3B Plants - 881%3B Viruses - 5%3B Other Eukaryotes - 2580 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT5G66730 C2H2-like zinc finger protein C2H2-like zinc finger protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%2C Zinc finger%2C double-stranded RNA binding (InterPro:IPR022755)%3B BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 (TAIR:AT3G50700.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB04g20107 ChrB04 + View
Brassica carinata BcaC04g23154 ChrC04 - View
Brassica napus A09p09810 A09 + View
Brassica napus A02p44420 A02 + View
Brassica rapa BraA02t09359Z A02 + View
Brassica rapa BraA09t36628Z A09 + View
Beta vulgaris EL10Ac6g14917 PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN Chr6_EL10_PGA_scaffold0 - View
Capsicum annuum CAN.G358.122 PGAv.1.6.scaffold358 + View
Cannabis sativa CANSAT01G1456 NC_044373.1 - View
Corylus avellana Haze_15117 Similar to GAF1: Zinc finger protein GAI-ASSOCIATED FACTOR 1 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc07_g09220 C2H2-like zinc finger protein chr7 - View
Coffea canephora Cc10_g03110 C2H2-like zinc finger protein chr10 + View
Citrus clementina Ciclev10001017m.g scaffold_5 - View
Citrus clementina Ciclev10025390m.g scaffold_7 + View
Ceratophyllum demersum CDE04G0316 2 + View
Cardamine hirsuta CARHR160210 Zinc finger protein Chr5 + View
Cardamine hirsuta CARHR280990 Zinc finger protein Chr8 + View
Carya illinoinensis CiPaw.02G015500 PTHR10593:SF28 - C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN Chr02 - View
Carya illinoinensis CiPaw.15G075200 PTHR10593//PTHR10593:SF32 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr15 - View
Carya illinoinensis CiPaw.01G035000 PTHR10593:SF28 - C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN Chr01 - View
Citrullus lanatus ClCG01G019380 Zinc finger protein CG_Chr01 - View
Cucumis melo MELO3C010929.2 protein indeterminate-domain 1-like chr03 + View
Cucumis melo MELO3C007814.2 protein indeterminate-domain 2-like chr08 - View
Chenopodium quinoa AUR62003180 IDD1: Protein indeterminate-domain 1 C_Quinoa_Scaffold_1000 + View
Chenopodium quinoa AUR62008000 IDD1: Protein indeterminate-domain 1 C_Quinoa_Scaffold_2646 + View
Capsella rubella Carub.0005s1703 PTHR10593//PTHR10593:SF31 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2-LIKE ZINC FINGER PROTEIN-RELATED scaffold_5 + View
Capsella rubella Carub.0008s2777 PTHR10593//PTHR10593:SF31 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2-LIKE ZINC FINGER PROTEIN-RELATED scaffold_8 + View
Cucumis sativus L. CsaV3_2G028550 protein indeterminate-domain 1-like chr2 - View
Cucumis sativus L. CsaV3_6G046110 protein indeterminate-domain 2-like chr6 - View
Daucus carota DCAR_025933 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv26812 GWHABJS00000021 + View
Davidia involucrata Dinv39398 GWHABJS00000011 - View
Davidia involucrata Dinv39962 GWHABJS00000014 + View
Davidia involucrata Dinv36059 GWHABJS00000002 - View
Durio zibethinus Duzib116G0505 NW_019167949.1 + View
Durio zibethinus Duzib187G1292 NW_019167860.1 - View
Durio zibethinus Duzib093G2099 NW_019167937.1 - View
Durio zibethinus Duzib264G0926 NW_019167960.1 - View
Durio zibethinus Duzib147G1634 NW_019168470.1 - View
Erigeron canadensis ECA238G0842 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.I02463 Chr09 + View
Erythranthe guttata Migut.H00183 scaffold_8 + View
Eutrema salsugineum Thhalv10010353m.g PTHR10593:SF31 - C2H2-LIKE ZINC FINGER PROTEIN-RELATED scaffold_16 - View
Eutrema salsugineum Thhalv10004063m.g PTHR10593:SF31 - C2H2-LIKE ZINC FINGER PROTEIN-RELATED scaffold_6 - View
Fragaria x ananassa FAN28G2273 PTHR10593:SF28 - C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN Fvb1-1 - View
Fragaria x ananassa FAN15G2295 PTHR10593//PTHR10593:SF32 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Fvb2-4 + View
Fragaria x ananassa FAN23G2372 PTHR10593:SF28 - C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN Fvb1-3 + View
Fragaria x ananassa FAN26G0329 PTHR10593:SF28 - C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN Fvb1-2 + View
Fragaria vesca FvH4_1g13710 PTHR10593:SF28 - C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN Fvb1 + View
Gossypium hirsutum Gohir.A02G164100 PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN A02 + View
Gossypium hirsutum Gohir.D11G192300 PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN D11 + View
Gossypium hirsutum Gohir.A11G185800 PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN A11 + View
Gossypium hirsutum Gohir.D03G016000 PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN D03 + View
Gossypium hirsutum Gohir.D06G008400 PTHR10593//PTHR10593:SF31 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2-LIKE ZINC FINGER PROTEIN-RELATED D06 + View
Gossypium hirsutum Gohir.A05G195500 PTHR10593//PTHR10593:SF32 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED A05 + View
Gossypium hirsutum Gohir.D05G198700 PTHR10593//PTHR10593:SF32 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED D05 + View
Glycine max Glyma.02G058400 PTHR10593//PTHR10593:SF31 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2-LIKE ZINC FINGER PROTEIN-RELATED Gm02 + View
Glycine max Glyma.16G141100 PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN Gm16 + View
Gossypium raimondii Gorai.010G011200 Chr10 + View
Gossypium raimondii Gorai.009G203800 Chr09 + View
Gossypium raimondii Gorai.007G205300 Chr07 + View
Gossypium raimondii Gorai.003G016200 Chr03 + View
Lupinus albus Lalb_Chr05g0212921 PTHR10593:SF28 - C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN Lalb_Chr05 + View
Lotus japonicus Lj2g0024977 PTHR10593:SF28 - C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN chr2 - View
Malus domestica MD15G1266200 C2H2-like zinc finger protein Chr15 + View
Malus domestica MD02G1151700 C2H2-like zinc finger protein Chr02 + View
Manihot esculenta Manes.13G137400 Chromosome13 - View
Manihot esculenta Manes.05G162100 Chromosome05 + View
Nelumbo nucifera Nn5g29536 chr5 - View
Nicotiana tabacum Nitab4.5_0001279g0070 Zinc finger C2H2-type/integrase DNA-binding domain, Zinc finger, C2H2, Zinc finger, C2H2-like Nitab4.5_0001279 + View
Olea europaea Oeu037892.1 chr10 - View
Petunia axillaris Peaxi162Scf00008g04011 C2H2-like zinc finger protein Peaxi162Scf00008 + View
Punica granatum PGR119G2154 NC_045132.1 + View
Punica granatum PGR031G0797 NC_045127.1 + View
Prunus persica Prupe.7G151500 PTHR10593:SF28 - C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN Pp07 - View
Prunus persica Prupe.1G381800 PTHR10593//PTHR10593:SF32 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Pp01 + View
Papaver somniferum PSO675G8036 NC_039358.1 - View
Papaver somniferum PSO541G4424 NC_039363.1 - View
Populus trichocarpa Potri.005G125600 PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN Chr05 + View
Populus trichocarpa Potri.007G028800 PTHR10593//PTHR10593:SF28 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN Chr07 + View
Phaseolus vulgaris Phvul.003G252400 PTHR10593:SF28 - C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN Chr03 - View
Quercus lobata QL06p045424 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0102031 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0113000 chr08 - View
Striga asiatica SGA_v2.0_scaffold276G46651 scaffold276 + View
Salix brachista Sabra07G0024900 GWHAAZH00000007 + View
Salix brachista Sabra05G0103200 GWHAAZH00000005 + View
Simmondsia chinensis Sc03g0000870 GWHAASQ00000003 + View
Sechium edule Sed0007834 LG10 - View
Sechium edule Sed0022665 LG10 - View
Sechium edule Sed0008465 LG14 - View
Solanum lycopersicum Solyc02g085580.4 Protein indeterminate-domain 1 (AHRD V3.3 *** A0A2G3D7R8_CAPCH) SL4.0ch02 + View
Solanum lycopersicum Solyc02g062940.3 Zinc finger protein (AHRD V3.3 *-* A0A200Q257_9MAGN) SL4.0ch02 + View
Schrenkiella parvula Sp2g29970 PTHR10593:SF31 - C2H2-LIKE ZINC FINGER PROTEIN-RELATED ch2-4 + View
Schrenkiella parvula Sp5g11530 KOG2462 - C2H2-type Zn-finger protein ch5-1 - View
Solanum pennellii Sopen02g030250 C2H2-like zinc finger protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type , Zinc finger, double-stranded RNA binding | BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 Spenn-ch02 + View
Solanum pennellii Sopen02g013980 C2H2-like zinc finger protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type , Zinc finger, double-stranded RNA binding | BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2 Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400012684 C2H2L domain class transcription factor ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400015498 Zinc finger, C2H2 type family protein ST4.03ch02 + View
Selenicereus undatus Hund16581 Scaffold_33677 - View
Trochodendron aralioides TAR628G1505 group5 - View
Trochodendron aralioides TAR625G1040 group4 + View
Trochodendron aralioides TAR381G1648 group11 - View
Trochodendron aralioides TAR376G0680 group14 - View
Theobroma cacao Thecc.01G039200 C2H2-like zinc finger protein Chromosome_1 + View
Theobroma cacao Thecc.08G023800 C2H2-like zinc finger protein Chromosome_8 - View
Tarenaya hassleriana THA.LOC104826912 protein indeterminate-domain 1 NW_010960188.1 - View
Tarenaya hassleriana THA.LOC104819219 protein indeterminate-domain 1-like isoform X1 NW_010966177.1 - View
Tripterygium wilfordii TWI73G0589 NC_052232.1 + View
Tripterygium wilfordii TWI56G0971 NC_052242.1 - View
Tripterygium wilfordii TWI09G0722 NC_052245.1 - View
Vaccinium macrocarpon vmacro17858 Similar to GAF1: Zinc finger protein GAI-ASSOCIATED FACTOR 1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0657 CM024074.1 - View
Vitis vinifera GSVIVG01009680001 chr18 - View
Vitis vinifera GSVIVG01019000001 chr4 - View