Gene: Sopen02g030250
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen02g030250
- Transcript Identifier Sopen02g030250.1
- Gene Type Coding gene
- Location Spenn-ch02 : 52390961-52393209 : positive
Gene Family Information
- ID HOM05D000179
- #Genes/#Species 2119/97
- Phylogenetic origin
- ID ORTHO05D000107
- #Genes/#Species 2044/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen02g030250.1
Descriptions
- Description C2H2-like zinc finger protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type , Zinc finger, double-stranded RNA binding | BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009937 | ISO | PLAZA Integrative Orthology | regulation of gibberellic acid mediated signaling pathway | AT3G50700 |
| GO:0010336 | ISO | PLAZA Integrative Orthology | gibberellic acid homeostasis | AT3G50700 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT3G50700 |
| GO:0010029 | ISO | PLAZA Integrative Orthology | regulation of seed germination | AT5G66730 |
| GO:0010431 | ISO | PLAZA Integrative Orthology | seed maturation | AT5G66730 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G50700 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G66730 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G50700 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.15 | RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF) |