Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0005769 unnamed protein product [Vitis vinifera] Chr10 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G13320 LG-8 - View
Acer truncatum Atru.chr3.339 chr3 + View
Acer truncatum Atru.chr13.692 chr13 - View
Actinidia chinensis Actinidia00444 Lachesis_group12 + View
Actinidia chinensis Actinidia36496 Lachesis_group4 + View
Arabidopsis lyrata AL3G47460 scaffold_3 - View
Arabidopsis lyrata AL7G13450 scaffold_7 + View
Amaranthus hybridus Ah.02g123920 Pentatricopeptide repeat-containing protein At1g19720 (Protein DYW7) AmaHy_arrow1_Scaffold_2 + View
Amaranthus hybridus Ah.03g144790 Pentatricopeptide repeat-containing protein At2g20540 AmaHy_arrow1_Scaffold_3 - View
Aquilegia oxysepala Aqoxy6G01324 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D0UAXJ PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT2G15690 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G32450.1)%3B Has 33034 Blast hits to 15947 proteins in 677 species: Archae - 2%3B Bacteria - 822%3B Metazoa - 2903%3B Fungi - 1398%3B Plants - 25666%3B Viruses - 35%3B Other Eukaryotes - 2208 (source: NCBI BLink). Chr2 - View
Brassica napus C09p11540 C09 - View
Brassica oleracea BolC9t54045H C9 - View
Cicer arietinum L. Ca_18682_v3 Ca_LG6_v3 + View
Cicer arietinum L. Ca_15949_v3 Ca_LG5_v3 + View
Corylus avellana Haze_15407 Similar to PCMP-E88: Pentatricopeptide repeat-containing protein At3g09040, mitochondrial (Arabidopsis thaliana OX%3D3702) 11 + View
Citrus clementina Ciclev10024774m.g scaffold_7 - View
Citrus clementina Ciclev10027922m.g scaffold_8 + View
Carpinus fangiana Cfa004017 Cfa01 - View
Cardamine hirsuta CARHR245340 Pentatricopeptide repeat-containing protein Chr7 + View
Cardamine hirsuta CARHR245760 Pentatricopeptide repeat-containing protein Chr7 - View
Cardamine hirsuta CARHR106040 Pentatricopeptide repeat-containing protein Chr3 - View
Carya illinoinensis CiPaw.15G056600 K01176 - alpha-amylase (E3.2.1.1, amyA, malS) Chr15 + View
Citrullus lanatus ClCG02G013350 Pentatricopeptide repeat-containing protein CG_Chr02 - View
Citrullus lanatus ClCG02G012830 Pentatricopeptide repeat-containing protein, putative CG_Chr02 - View
Cucumis melo MELO3C020885.2 Pentatricopeptide repeat-containing protein chr11 + View
Carica papaya Cpa.g.sc62.17 supercontig_62 - View
Chenopodium quinoa AUR62003877 CYP707A4: Abscisic acid 8'-hydroxylase 4 C_Quinoa_Scaffold_2370 - View
Chenopodium quinoa AUR62001934 PCMP-E88: Pentatricopeptide repeat-containing protein At3g09040, mitochondrial C_Quinoa_Scaffold_4480 + View
Capsella rubella Carub.0007s0292 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_7 + View
Cucumis sativus L. CsaV3_2G017530 Pentatricopeptide repeat-containing protein chr2 - View
Cucumis sativus L. CsaV3_2G016910 pentatricopeptide repeat-containing protein At3g50420 chr2 - View
Daucus carota DCAR_010898 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_025726 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv39855 GWHABJS00000014 - View
Davidia involucrata Dinv42153 GWHABJS00000002 - View
Durio zibethinus Duzib187G1325 NW_019167860.1 + View
Durio zibethinus Duzib248G1561 NW_019168048.1 - View
Erigeron canadensis ECA238G0286 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.F00227 Chr06 - View
Eucalyptus grandis Eucgr.I00842 Chr09 + View
Eucalyptus grandis Eucgr.I00931 Chr09 + View
Eucalyptus grandis Eucgr.H02049 Chr08 - View
Erythranthe guttata Migut.B00342 scaffold_2 + View
Erythranthe guttata Migut.H00435 scaffold_8 + View
Fragaria x ananassa FAN15G3312 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-4 - View
Fragaria x ananassa FAN26G2505 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb1-2 + View
Fragaria x ananassa FAN23G2192 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb1-3 - View
Fragaria x ananassa FAN20G1863 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb2-3 - View
Fragaria x ananassa FAN26G1562 PF01535//PF07734//PF13041//PF13812 - PPR repeat (PPR) // F-box associated (FBA_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb1-2 - View
Fragaria x ananassa FAN24G0980 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-2 + View
Fragaria x ananassa FAN15G2002 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb2-4 + View
Fragaria x ananassa FAN27G0423 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb2-1 + View
Fragaria vesca FvH4_1g15970 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb1 - View
Fragaria vesca FvH4_2g06150 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2 - View
Gossypium hirsutum Gohir.D13G038600 PF13041//PF14432 - PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D13 + View
Gossypium hirsutum Gohir.A03G188700 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A03 + View
Gossypium hirsutum Gohir.A13G039900 PF13041//PF14432 - PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A13 + View
Gossypium hirsutum Gohir.A11G192000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A11 - View
Gossypium hirsutum Gohir.D11G198500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D11 - View
Glycine max Glyma.20G013300 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm20 + View
Glycine max Glyma.06G040000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm06 - View
Glycine max Glyma.02G133100 PF01535//PF13812//PF14432 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm02 - View
Gossypium raimondii Gorai.013G043300 Chr13 + View
Gossypium raimondii Gorai.007G212600 Chr07 - View
Hydrangea macrophylla Hma1.2p1_0461F.1_g157840 Hma1.2p1_0461F.1 + View
Lotus japonicus Lj1g0025724 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr1 + View
Lonicera japonica Lj7C69T2 GWHAAZE00000007 - View
Lactuca sativa Lsat_1_v5_gn_2_84201 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lsat_1_v8_lg_2 - View
Malus domestica MD05G1080000 Tetratricopeptide repeat (TPR)-like superfamily protein Chr05 + View
Malus domestica MD15G1083200 Tetratricopeptide repeat (TPR)-like superfamily protein Chr15 + View
Malus domestica MD02G1164000 Pentatricopeptide repeat (PPR) superfamily protein Chr02 - View
Manihot esculenta Manes.13G125000 Chromosome13 + View
Medicago truncatula Medtr3g101700 PPR containing plant-like protein chr3 - View
Olea europaea Oeu007282.1 chr3 - View
Olea europaea Oeu050783.1 chr18 + View
Olea europaea Oeu013706.1 chr15 + View
Petunia axillaris Peaxi162Scf00016g00187 Pentatricopeptide repeat-containing protein Peaxi162Scf00016 - View
Punica granatum PGR042G0145 NC_045130.1 + View
Punica granatum PGR083G1252 NC_045133.1 - View
Prunus persica Prupe.8G123800 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp08 + View
Prunus persica Prupe.7G134000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp07 + View
Prunus persica Prupe.1G435700 Pp01 + View
Pisum sativum Psat5g043200 PPR repeat family chr5LG3 + View
Populus trichocarpa Potri.014G029500 K01176 - alpha-amylase (E3.2.1.1, amyA, malS) Chr14 + View
Populus trichocarpa Potri.005G137900 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr05 - View
Phaseolus vulgaris Phvul.003G244800 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr03 + View
Quercus lobata QL06p041473 6 + View
Quercus lobata QL11p036006 11 - View
Rosa chinensis RcHm_v2.0_Chr6g0307911 RcHm_v2.0_Chr6 - View
Rosa chinensis RcHm_v2.0_Chr2g0105281 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim05G0083700 chr05 + View
Striga asiatica SGA_v2.0_scaffold28G11754 scaffold28 - View
Striga asiatica SGA_v2.0_scaffold15G07295 scaffold15 - View
Striga asiatica SGA_v2.0_scaffold90G27663 scaffold90 - View
Salix brachista Sabra05G0107100 GWHAAZH00000005 - View
Salix brachista Sabra14G0020300 GWHAAZH00000014 + View
Simmondsia chinensis Sc16g0001910 GWHAASQ00000016 + View
Solanum lycopersicum Solyc01g108180.4 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QLP1_9MAGN) SL4.0ch01 + View
Solanum pennellii Sopen02g015160 Encodes a pentatricopeptide (PPR) protein involved in leaf and root development. dot4 mutants have an aberrant midgap venation pattern in juvenile leaves and cotyledons. | DEFECTIVELY ORGANIZED TRIBUTARIES 4 (DOT4) | INVOLVED IN: cotyledon vascular tissue pattern formation, phloem or xylem histogenesis, leaf vascular tissue pattern formation, leaf development | LOCATED IN: chloroplast | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch02 + View
Solanum pennellii Sopen01g050410 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400025794 Pentatricopeptide repeat-containing protein ST4.03ch01 + View
Theobroma cacao Thecc.08G007700 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_8 + View
Theobroma cacao Thecc.02G100200 Tetratricopeptide repeat-like superfamily protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104819583 pentatricopeptide repeat-containing protein At2g15690 NW_010966177.1 - View
Tripterygium wilfordii TWI56G1423 NC_052242.1 + View
Vitis vinifera GSVIVG01009496001 chr18 + View