Gene: THA.LOC104819583

General Information

Structural Information

Species Tarenaya hassleriana
Gene Identifier THA.LOC104819583
Transcript Identifier THA.XM_010549722.2
Gene Type Coding gene
Location NW_010966177.1 : 5680119-5681861 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D001705
#Genes/#Species 367/90
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

GeneID 104819583
RefSeq XM_010549722.2
RefSeq XP_010548024.1
tid rna25772
id gene16704

Descriptions

Short descriptions
Ortholog descriptions

Description pentatricopeptide repeat-containing protein At2g15690

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT2G15690

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	InterPro	zinc ion binding
GO:0005515	IEA	InterPro	protein binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT2G15690

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT2G15690
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT2G15690

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002885	Pentatricopeptide repeat
IPR032867	DYW domain
IPR011990	Tetratricopeptide-like helical domain superfamily

Mapman id	Description
16.11.3.3.4.18	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (DYW2)