Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G3770 LG-5 - View
Acer truncatum Atru.chr4.2065 chr4 + View
Actinidia chinensis Actinidia39900 Lachesis_group17 - View
Avicennia marina MSTRG.9894 ScioBoG_12795_HRSCAF_12848 + View
Avicennia marina MSTRG.4135 ScioBoG_102837_HRSCAF_103074 - View
Amaranthus hybridus Ah.04g155840 Cryptochrome-2 (Atcry2) (Blue light photoreceptor) (Protein PHR homolog 1) (AtPHH1) (Protein SUPPRESSOR OF elf3 20) AmaHy_arrow1_Scaffold_4 + View
Aquilegia oxysepala Aqoxy5G00243 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SC00KR K12119 - cryptochrome 2 (CRY2) arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5JU8JU K12119 - cryptochrome 2 (CRY2) arahy.Tifrunner.gnm1.Arahy.19 + View
Arabidopsis thaliana AT1G04400 cryptochrome 2 Blue light receptor mediating blue-light regulated cotyledon expansion and flowering time. Positive regulator of the flowering-time gene CONSTANS. This gene possesses a light-induced CNT2 N-terminal homodimerisation domain.Involved in blue-light induced stomatal opening. Involved in triggering chromatin decondensation. An 80-residue motif (NC80) is sufficient to confer CRY2's physiological function. It is proposed that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a closed conformation to suppress the NC80 motif in the absence of light. In response to blue light%2C the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an open conformation%2C resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses. Cry2 phosphorylation and degradation both occur in the nucleus. cryptochrome 2 (CRY2)%3B FUNCTIONS IN: protein homodimerization activity%2C blue light photoreceptor activity%3B INVOLVED IN: in 9 processes%3B LOCATED IN: nucleus%2C vacuole%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729)%2C Cryptochrome/DNA photolyase%2C class 1 conserved site%2C C-terminal (InterPro:IPR018394)%2C DNA photolyase%2C N-terminal (InterPro:IPR006050)%2C DNA photolyase%2C FAD-binding/Cryptochrome%2C C-terminal (InterPro:IPR005101)%2C Cryptochrome%2C plant (InterPro:IPR014134)%2C Cryptochrome/DNA photolyase%2C class 1 (InterPro:IPR002081)%3B BEST Arabidopsis thaliana protein match is: cryptochrome 1 (TAIR:AT4G08920.1)%3B Has 10129 Blast hits to 10113 proteins in 1516 species: Archae - 99%3B Bacteria - 3201%3B Metazoa - 386%3B Fungi - 148%3B Plants - 723%3B Viruses - 2%3B Other Eukaryotes - 5570 (source: NCBI BLink). Chr1 - View
Brassica napus A10p02840 A10 - View
Brassica napus C05p02590 C05 - View
Brassica oleracea BolC5t29040H C5 - View
Brassica rapa BraA10t42551Z A10 - View
Beta vulgaris EL10Ac3g05010 K12119 - cryptochrome 2 (CRY2) Chr3_EL10_PGA_scaffold7 + View
Cannabis sativa CANSAT78G0380 NC_044376.1 + View
Cicer arietinum L. Ca_11975_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_09868_v3 Ca_LG4_v3 + View
Corylus avellana Haze_11374 Similar to CRY2: Cryptochrome-2 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc03_g05480 Cryptochrome-2 chr3 - View
Citrus clementina Ciclev10004525m.g scaffold_9 - View
Cardamine hirsuta CARHR180300 Cryptochrome 2 Chr6 - View
Cardamine hirsuta CARHR003740 Cryptochrome 2 Chr1 - View
Carya illinoinensis CiPaw.02G112700 K12119 - cryptochrome 2 (CRY2) Chr02 + View
Carya illinoinensis CiPaw.01G185200 K12119 - cryptochrome 2 (CRY2) Chr01 + View
Citrullus lanatus ClCG06G006980 Cryptochrome 2 CG_Chr06 - View
Cucumis melo MELO3C022995.2 cryptochrome-1 chr05 - View
Carica papaya Cpa.g.sc44.63 supercontig_44 + View
Chenopodium quinoa AUR62002133 CRY2: Cryptochrome-2 C_Quinoa_Scaffold_4480 - View
Capsella rubella Carub.0001s0358 K12119 - cryptochrome 2 (CRY2) scaffold_1 - View
Daucus carota DCAR_024248 hypothetical protein DCARv2_Chr7 - View
Daucus carota DCAR_027315 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv29863 GWHABJS00000016 + View
Davidia involucrata Dinv27049 GWHABJS00000014 + View
Durio zibethinus Duzib212G0194 NW_019168026.1 + View
Durio zibethinus Duzib151G0115 NW_019167904.1 - View
Durio zibethinus Duzib052G0748 NW_019167849.1 - View
Erigeron canadensis ECA240G2764 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.H00159 Chr08 + View
Erythranthe guttata Migut.G00523 scaffold_7 + View
Eutrema salsugineum Thhalv10003169m.g K12119 - cryptochrome 2 (CRY2) scaffold_17 - View
Eutrema salsugineum Thhalv10007081m.g K12119 - cryptochrome 2 (CRY2) scaffold_5 + View
Fragaria x ananassa FAN12G1647 K12119 - cryptochrome 2 (CRY2) Fvb4-3 + View
Fragaria x ananassa FAN17G0868 K12119 - cryptochrome 2 (CRY2) Fvb4-2 + View
Fragaria x ananassa FAN22G2410 K12119 - cryptochrome 2 (CRY2) Fvb4-1 - View
Fragaria vesca FvH4_4g03570 K12119 - cryptochrome 2 (CRY2) Fvb4 - View
Gossypium hirsutum Gohir.A02G039200 4.1.99.3 - Deoxyribodipyrimidine photo-lyase / Photoreactivating enzyme A02 - View
Gossypium hirsutum Gohir.D02G045300 4.1.99.3 - Deoxyribodipyrimidine photo-lyase / Photoreactivating enzyme D02 - View
Glycine max Glyma.10G180600 K12119 - cryptochrome 2 (CRY2) Gm10 - View
Glycine max Glyma.02G005700 K12119 - cryptochrome 2 (CRY2) Gm02 + View
Glycine max Glyma.20G209900 K12119 - cryptochrome 2 (CRY2) Gm20 + View
Gossypium raimondii Gorai.005G050000 Chr05 - View
Hydrangea macrophylla Hma1.2p1_0267F.1_g107300 Hma1.2p1_0267F.1 + View
Lupinus albus Lalb_Chr21g0312011 K12119 - cryptochrome 2 (CRY2) Lalb_Chr21 - View
Lotus japonicus Lj5g0000267 K12119 - cryptochrome 2 (CRY2) chr5 - View
Lotus japonicus Lj6g0003915 K12119 - cryptochrome 2 (CRY2) chr6 + View
Lonicera japonica Lj3A695T40 GWHAAZE00000003 + View
Magnolia biondii MBI10_g46254_MAGBIO AED:0.02 Chr10 - View
Malus domestica MD16G1217700 cryptochrome 2 Chr16 - View
Malus domestica MD13G1213600 cryptochrome 2 Chr13 - View
Manihot esculenta Manes.15G040500 Chromosome15 - View
Medicago truncatula Medtr1g043190 cryptochrome 2B apoprotein chr1 + View
Medicago truncatula Medtr1g076190 cryptochrome 2B apoprotein chr1 + View
Nelumbo nucifera Nn3g19643 chr3 - View
Nelumbo nucifera Nn1g02753 chr1 - View
Nicotiana tabacum Nitab4.5_0000044g0250 DNA photolyase, FAD-binding/Cryptochrome, C-terminal, DNA photolyase, N-terminal, Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal, Rossmann-like alpha/beta/alpha sandwich fold, Cryptochrome/DNA photolyase, class 1, Cryptochrome, plant Nitab4.5_0000044 - View
Oryza sativa ssp. japonica Os02g0625000 Similar to Cryptochrome 2. Cryptochrome 2, blue light photoreceptor, Promotion of flowering time chr02 + View
Punica granatum PGR031G1957 NC_045127.1 - View
Prunus persica Prupe.1G038900 K12119 - cryptochrome 2 (CRY2) Pp01 - View
Papaver somniferum PSO832G0396 NC_039367.1 + View
Papaver somniferum PSO210G2272 NC_039359.1 + View
Populus trichocarpa Potri.008G166566 PTHR11455:SF18 - DEOXYRIBODIPYRIMIDINE PHOTO-LYASE, MITOCHONDRIAL Chr08 - View
Populus trichocarpa Potri.010G071200 K12119 - cryptochrome 2 (CRY2) Chr10 + View
Phaseolus vulgaris Phvul.007G108900 K12119 - cryptochrome 2 (CRY2) Chr07 + View
Phaseolus vulgaris Phvul.007G273300 K12119 - cryptochrome 2 (CRY2) Chr07 - View
Quercus lobata QL06p017842 6 - View
Rosa chinensis RcHm_v2.0_Chr4g0392941 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim02G0037100 chr02 - View
Striga asiatica SGA_v2.0_scaffold67G22751 scaffold67 - View
Salvia bowleyana SalBow2G2083 GWHASIU00000007 + View
Salix brachista Sabra10G0036400 GWHAAZH00000010 - View
Salix brachista Sabra08G0127100 GWHAAZH00000008 - View
Simmondsia chinensis Sc19g0003660 GWHAASQ00000019 - View
Sechium edule Sed0021244 LG04 - View
Solanum lycopersicum Solyc09g090100.3 cryptochrome 2 SL4.0ch09 - View
Schrenkiella parvula Sp1g03220 K12119 - cryptochrome 2 (CRY2) ch1-1 - View
Solanum pennellii Sopen09g033010 Blue light receptor mediating blue-light regulated cotyledon expansion and flowering time. Positive regulator of the flowering-time gene CONSTANS. This gene possesses a light-induced CNT2 N-terminal homodimerisation domain.Involved in blue-light induced stomatal opening. Involved in triggering chromatin decondensation. An 80-residue motif (NC80) is sufficient to confer CRY2s physiological function. It is proposed that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a closed conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an open conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses. Cry2 phosphorylation and degradation both occur in the nucleus. | cryptochrome 2 (CRY2) | FUNCTIONS IN: protein homodimerization activity, blue light photoreceptor activity | INVOLVED IN: in 9 processes | LOCATED IN: nucleus, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold , Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal , DNA photolyase, N-terminal , DNA photolyase, FAD-binding/Cryptochrome, C-terminal , Cryptochrome, plant , Cryptochrome/DNA photolyase, class 1 | BEST Arabidopsis thaliana protein match is: cryptochrome 1 Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400017172 Cryptochrome 2 ST4.03ch09 - View
Selenicereus undatus Hund11886 Scaffold_33679 - View
Trochodendron aralioides TAR633G0551 group2 + View
Theobroma cacao Thecc.04G254700 Cryptochrome 2 Chromosome_4 - View
Tarenaya hassleriana THA.LOC104826084 cryptochrome-1 isoform X1 NW_010967707.1 - View
Vaccinium macrocarpon vmacro15439 Similar to CRY2: Cryptochrome-2 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G2788 CM024071.1 + View
Vitis vinifera GSVIVG01027806001 chr5 - View