Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0020259 PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Vitis vinifera] Chr5 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr4.2723 chr4 + View
Actinidia chinensis Actinidia23442 Lachesis_group3 - View
Arabidopsis lyrata AL3G35610 scaffold_3 - View
Avicennia marina MSTRG.3961 ScioBoG_102837_HRSCAF_103074 - View
Aquilegia oxysepala Aqoxy2G03152 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1181X5 K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Z8U3KU K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.96HG27 PTHR11624//PTHR11624:SF83 - DEHYDROGENASE RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.00UVWE K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT3G21500 1-deoxy-D-xylulose 5-phosphate synthase 1 Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity. 1-deoxy-D-xylulose 5-phosphate synthase 1 (DXPS1)%3B FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity%3B INVOLVED IN: metabolic process%2C terpenoid biosynthetic process%3B EXPRESSED IN: stem%2C embryo%2C sepal%2C stamen%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%3B CONTAINS InterPro DOMAIN/s: Transketolase%2C N-terminal (InterPro:IPR005474)%2C Transketolase%2C C-terminal (InterPro:IPR005476)%2C Transketolase%2C C-terminal/Pyruvate-ferredoxin oxidoreductase%2C domain II (InterPro:IPR009014)%2C Transketolase-like%2C pyrimidine-binding domain (InterPro:IPR005475)%2C Transketolase binding site (InterPro:IPR020826)%2C Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477)%2C Transketolase-like%2C C-terminal (InterPro:IPR015941)%2C Dehydrogenase%2C E1 component (InterPro:IPR001017)%3B BEST Arabidopsis thaliana protein match is: Deoxyxylulose-5-phosphate synthase (TAIR:AT4G15560.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0706G160 AmTr_v1.0_scaffold00057 + View
Beta vulgaris EL10Ac3g06524 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Chr3_EL10_PGA_scaffold7 - View
Capsicum annuum CAN.G185.11 PGAv.1.6.scaffold185 - View
Cannabis sativa CANSAT78G0190 NC_044376.1 + View
Cicer arietinum L. Ca_13457_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_21556_v3 Ca_LG7_v3 - View
Corylus avellana Haze_01036 Similar to TKT2: Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic (Capsicum annuum OX%3D4072) 1 + View
Coffea canephora Cc03_g02540 Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic chr3 - View
Citrus clementina Ciclev10004432m.g scaffold_9 - View
Carpinus fangiana Cfa015515 Cfa06 - View
Carya illinoinensis CiPaw.01G155100 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Chr01 - View
Carya illinoinensis CiPaw.02G087800 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Chr02 - View
Citrullus lanatus ClCG06G005530 1-deoxy-D-xylulose 5-phosphate synthase family protein CG_Chr06 - View
Carica papaya Cpa.g.sc16.90 supercontig_16 + View
Capsella rubella Carub.0003s2154 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase scaffold_3 - View
Cucumis sativus L. CsaV3_6G005620 1-deoxy-D-xylulose 5-phosphate synthase 1 chr6 + View
Daucus carota DCAR_030576 1-deoxy-D-xylulose-5-phosphate synthase DCARv2_Chr9 - View
Davidia involucrata Dinv44440 GWHABJS00000014 + View
Davidia involucrata Dinv38339 GWHABJS00000016 + View
Durio zibethinus Duzib151G0652 NW_019167904.1 + View
Durio zibethinus Duzib212G0423 NW_019168026.1 - View
Eucalyptus grandis Eucgr.H03664 Chr08 + View
Erythranthe guttata Migut.G00229 scaffold_7 - View
Fragaria x ananassa FAN07G1754 PF00676//PF02779//PF02780 - Dehydrogenase E1 component (E1_dh) // Transketolase, pyrimidine binding domain (Transket_pyr) // Transketolase, C-terminal domain (Transketolase_C) Fvb4-4 + View
Fragaria x ananassa FAN12G3845 K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) Fvb4-3 + View
Fragaria x ananassa FAN12G1219 K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) Fvb4-3 - View
Fragaria x ananassa FAN22G0810 K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) Fvb4-1 + View
Fragaria x ananassa FAN17G0838 K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) Fvb4-2 - View
Fragaria vesca FvH4_4g16950 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Fvb4 + View
Gossypium hirsutum Gohir.A10G102486 PTHR11624//PTHR11624:SF83 - DEHYDROGENASE RELATED // SUBFAMILY NOT NAMED A10 - View
Gossypium hirsutum Gohir.D10G165100 PTHR11624//PTHR11624:SF83 - DEHYDROGENASE RELATED // SUBFAMILY NOT NAMED D10 + View
Glycine max Glyma.17G021800 K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) Gm17 + View
Glycine max Glyma.15G099300 K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) Gm15 - View
Glycine max Glyma.13G213500 K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) Gm13 + View
Glycine max Glyma.07G252600 K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) Gm07 - View
Gossypium raimondii Gorai.011G184200 Chr11 + View
Hydrangea macrophylla Hma1.2p1_0643F.1_g194660 Hma1.2p1_0643F.1 + View
Hydrangea macrophylla Hma1.2p1_0078F.1_g040890 Hma1.2p1_0078F.1 - View
Lupinus albus Lalb_Chr18g0055821 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Lalb_Chr18 - View
Lupinus albus Lalb_Chr12g0196411 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Lalb_Chr12 + View
Lotus japonicus Lj4g0016770 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase chr4 + View
Lotus japonicus Lj6g0026045 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase chr6 + View
Lonicera japonica Lj3C808G8 GWHAAZE00000003 + View
Malus domestica MD16G1177200 Deoxyxylulose-5-phosphate synthase Chr16 - View
Malus domestica MD13G1175400 Deoxyxylulose-5-phosphate synthase Chr13 - View
Manihot esculenta Manes.15G018800 Chromosome15 - View
Medicago truncatula Medtr4g118640 1-deoxy-D-xylulose-5-phosphate synthase chr4 + View
Nelumbo nucifera Nn4g26076 chr4 - View
Nelumbo nucifera Nn3g21240 chr3 + View
Olea europaea Oeu029281.1 scaffold244 - View
Punica granatum PGR004G0175 NC_045131.1 - View
Prunus persica Prupe.1G144100 Pp01 - View
Pisum sativum Psat1g186480 1-deoxy-D-xylulose-5-phosphate synthase chr1LG6 - View
Papaver somniferum PSO832G3123 NC_039367.1 - View
Populus trichocarpa Potri.008G196500 K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) Chr08 - View
Phaseolus vulgaris Phvul.006G159900 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Chr06 + View
Quercus lobata QL06p006770 6 + View
Rosa chinensis RcHm_v2.0_Chr4g0420531 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim04G0214400 chr04 + View
Striga asiatica SGA_v2.0_scaffold89G27565 scaffold89 - View
Simmondsia chinensis Sc13g0003720 GWHAASQ00000013 - View
Sechium edule Sed0027477 LG04 - View
Solanum lycopersicum Solyc01g067890.4 1-D-deoxyxylulose 5-phosphate synthase SL4.0ch01 - View
Solanum pennellii Sopen01g029840 Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor (EC 2.2.1.7) (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) (CapTKT2) - Capsicum annuum (Bell pepper), Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis | CLOROPLASTOS ALTERADOS 1 (CLA1) | FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity | INVOLVED IN: chlorophyll biosynthetic process, response to light stimulus, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway | LOCATED IN: chloroplast | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Transketolase, N-terminal , Transketolase, C-terminal , Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II , Transketolase-like, pyrimidine-binding domain , Transketolase binding site , Transketolase-like, C-terminal , Deoxyxylulose-5-phosphate synthase , Dehydrogenase, E1 component | BEST Arabidopsis thaliana protein match is: 1-deoxy-D-xylulose 5-phosphate synthase 1 Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400022855 1-D-deoxyxylulose 5-phosphate synthase ST4.03ch01 - View
Theobroma cacao Thecc.04G274800 Deoxyxylulose-5-phosphate synthase Chromosome_4 + View
Trifolium pratense TPR.G14958 Tp57577_TGAC_v2_scaf_591 - View
Tripterygium wilfordii TWI53G1461 NC_052244.1 + View
Tripterygium wilfordii TWI09G0625 NC_052245.1 + View
Vigna mungo VMungo0540G2391 CM024075.1 - View
Vigna mungo VMungo1215G2736 CM024074.1 - View
Vitis vinifera GSVIVG01017832001 chr5 - View