Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0018844 PREDICTED: PHD finger protein ALFIN-LIKE 2-like [Cucumis melo] Chr4 + View
CSS0039445 PREDICTED: PHD finger protein ALFIN-LIKE 2-like [Cucumis melo] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G6670 LG-11 - View
Acer truncatum Atru.chr12.44 chr12 + View
Acer truncatum Atru.chr8.2250 chr8 + View
Actinidia chinensis Actinidia11581 Lachesis_group21 - View
Actinidia chinensis Actinidia13940 Lachesis_group21 + View
Arabidopsis lyrata AL3G22720 scaffold_3 - View
Arabidopsis lyrata AL6G15500 scaffold_6 - View
Aquilegia oxysepala Aqoxy2G00877 CHR02 - View
Aquilegia oxysepala Aqoxy4G02544 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.V65RN7 PTHR12321//PTHR12321:SF61 - CPG BINDING PROTEIN // PHD FINGER PROTEIN ALFIN-LIKE 5 arahy.Tifrunner.gnm1.Arahy.07 + View
Arabidopsis thaliana AT5G05610 alfin-like 1 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1)%2C AT3G11200 (AL2)%2C AT3G42790 (AL3)%2C AT5G26210 (AL4)%2C AT5G20510 (AL5)%2C AT2G02470 (AL6)%2C AT1G14510 (AL7). alfin-like 1 (AL1)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C Protein of unknown function DUF3594 (InterPro:IPR021998)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT3G11200 alfin-like 2 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1)%2C AT3G11200 (AL2)%2C AT3G42790 (AL3)%2C AT5G26210 (AL4)%2C AT5G20510 (AL5)%2C AT2G02470 (AL6)%2C AT1G14510 (AL7). alfin-like 2 (AL2)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Protein of unknown function DUF3594 (InterPro:IPR021998)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: alfin-like 1 (TAIR:AT5G05610.2)%3B Has 1527 Blast hits to 1482 proteins in 179 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 758%3B Fungi - 235%3B Plants - 458%3B Viruses - 0%3B Other Eukaryotes - 76 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB04g21144 ChrB04 + View
Brassica carinata BcaC09g48159 ChrC09 - View
Brassica napus A05p38100 A05 + View
Brassica napus C05p56890 C05 + View
Brassica oleracea BolC5t34353H C5 + View
Brassica rapa BraA05t22602Z A05 + View
Capsicum annuum CAN.G5.7 PGAv.1.6.scaffold5 + View
Cannabis sativa CANSAT35G1694 NC_044378.1 + View
Corylus avellana Haze_17232 Similar to AL1: PHD finger protein ALFIN-LIKE 1 (Arabidopsis thaliana OX%3D3702) 11 + View
Corylus avellana Haze_21009 Similar to AL1: PHD finger protein ALFIN-LIKE 1 (Arabidopsis thaliana OX%3D3702) 10 + View
Coffea canephora Cc02_g06440 PHD finger protein ALFIN-LIKE 1 chr2 - View
Coffea canephora Cc06_g01280 PHD finger protein ALFIN-LIKE 1 chr6 - View
Citrus clementina Ciclev10032593m.g scaffold_4 + View
Citrus clementina Ciclev10012615m.g scaffold_6 + View
Carpinus fangiana Cfa017199 Cfa07 - View
Carpinus fangiana Cfa001312 Cfa01 - View
Cardamine hirsuta CARHR085760 PHD finger protein ALFIN-LIKE 2 Chr3 - View
Carya illinoinensis CiPaw.09G209800 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Chr09 + View
Citrullus lanatus ClCG07G004210 PHD finger protein ALFIN-LIKE 2 CG_Chr07 + View
Citrullus lanatus ClCG10G022160 PHD finger protein ALFIN-LIKE 1 CG_Chr10 + View
Cucumis melo MELO3C025197.2 PHD finger alfin-like protein chr10 + View
Cucumis melo MELO3C009164.2 PHD finger protein ALFIN-LIKE 1-like chr04 + View
Capsella rubella Carub.0006s0451 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED scaffold_6 - View
Capsella rubella Carub.0003s1051 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED scaffold_3 - View
Cucumis sativus L. CsaV3_5G010160 PHD finger alfin-like protein chr5 + View
Cucumis sativus L. CsaV3_3G033750 PHD finger alfin-like protein chr3 - View
Daucus carota DCAR_011816 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv23127 GWHABJS00000015 + View
Davidia involucrata Dinv10617 GWHABJS00000009 + View
Davidia involucrata Dinv18000 GWHABJS00000004 + View
Durio zibethinus Duzib128G0806 NW_019168481.1 - View
Durio zibethinus Duzib106G1534 NW_019168492.1 - View
Erigeron canadensis ECA232G0628 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.G03065 Chr07 + View
Eutrema salsugineum Thhalv10021406m.g PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED scaffold_13 + View
Eutrema salsugineum Thhalv10014538m.g PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED scaffold_2 - View
Fragaria x ananassa FAN06G4850 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb7-2 - View
Fragaria x ananassa FAN09G2476 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb6-2 + View
Fragaria x ananassa FAN03G2085 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb7-3 - View
Fragaria x ananassa FAN01G1529 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb7-4 - View
Fragaria vesca FvH4_7g24541 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb7 + View
Fragaria vesca FvH4_6g11380 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb6 - View
Gossypium hirsutum Gohir.A06G163000 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED A06 - View
Gossypium hirsutum Gohir.A13G015000 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED A13 - View
Gossypium hirsutum Gohir.D10G248900 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED D10 + View
Gossypium hirsutum Gohir.D13G016200 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED D13 - View
Gossypium hirsutum Gohir.D06G168500 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED D06 - View
Gossypium hirsutum Gohir.A10G237200 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED A10 + View
Glycine max Glyma.07G150800 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Gm07 + View
Gossypium raimondii Gorai.010G196600 Chr10 - View
Gossypium raimondii Gorai.011G289200 Chr11 + View
Gossypium raimondii Gorai.013G017700 Chr13 - View
Lupinus albus Lalb_Chr23g0276931 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr23 + View
Lonicera japonica Lj8C67T4 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_2_123580 Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_9_61540 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_9 + View
Malus domestica MD12G1167600 alfin-like 1 Chr12 + View
Malus domestica MD01G1153500 alfin-like 1 Chr01 + View
Malus domestica MD07G1222500 alfin-like 1 Chr07 + View
Malus domestica MD04G1154200 alfin-like 1 Chr04 + View
Manihot esculenta Manes.07G130200 Chromosome07 + View
Nelumbo nucifera Nn2g13140 chr2 + View
Nelumbo nucifera Nn2g10852 chr2 + View
Punica granatum PGR142G3311 NC_045128.1 + View
Prunus persica Prupe.2G250800 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Pp02 + View
Prunus persica Prupe.6G278200 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Pp06 + View
Papaver somniferum PSO384G4906 NC_039368.1 + View
Populus trichocarpa Potri.008G069200 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Chr08 + View
Populus trichocarpa Potri.010G188100 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Chr10 - View
Populus trichocarpa Potri.016G116900 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED Chr16 + View
Quercus lobata QL07p035606 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0463001 RcHm_v2.0_Chr3 - View
Rosa chinensis RcHm_v2.0_Chr1g0370381 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim09G0177500 chr09 + View
Rhododendron simsii Rhsim05G0216400 chr05 + View
Rhododendron simsii Rhsim03G0144400 chr03 + View
Salix brachista Sabra10G0144900 GWHAAZH00000010 - View
Salix brachista Sabra16G0112500 GWHAAZH00000016 + View
Salix brachista Sabra08G0050800 GWHAAZH00000008 + View
Sechium edule Sed0002869 LG04 + View
Sechium edule Sed0017594 LG07 + View
Solanum lycopersicum Solyc10g076690.2 PHD finger protein ALFIN-LIKE 1 (AHRD V3.3 *** A0A2G2YKZ5_CAPAN) SL4.0ch10 - View
Schrenkiella parvula Sp6g37250 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED ch6-6 + View
Schrenkiella parvula Sp3g09480 PTHR12321//PTHR12321:SF46 - CPG BINDING PROTEIN // SUBFAMILY NOT NAMED ch3-1 - View
Solanum pennellii Sopen06g017390 AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA. | alfin-like 1 (AL1) | CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site , Zinc finger, PHD-type , Protein of unknown function DUF3594 , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: alfin-like 2 Spenn-ch06 - View
Solanum pennellii Sopen10g028290 AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA. | alfin-like 1 (AL1) | CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site , Zinc finger, PHD-type , Protein of unknown function DUF3594 , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: alfin-like 2 Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400019178 Phd/F-box containing protein ST4.03ch10 - View
Trochodendron aralioides TAR633G2712 group2 + View
Trochodendron aralioides TAR636G1583 group1 - View
Trochodendron aralioides TAR623G0117 group7 + View
Theobroma cacao Thecc.10G015500 Alfin-like 1 Chromosome_10 - View
Tarenaya hassleriana THA.LOC104816546 PHD finger protein ALFIN-LIKE 2-like NW_010965775.1 - View
Tripterygium wilfordii TWI74G0967 NC_052234.1 - View
Vaccinium macrocarpon vmacro10039 Similar to Os05g0163100: PHD finger protein ALFIN-LIKE 1 (Oryza sativa subsp. japonica OX%3D39947) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro06964 Similar to Os05g0163100: PHD finger protein ALFIN-LIKE 1 (Oryza sativa subsp. japonica OX%3D39947) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro20284 Similar to AL1: PHD finger protein ALFIN-LIKE 1 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01011162001 chr8 + View
Vitis vinifera GSVIVG01032811001 chr13 + View