Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0031372 phytochrome B [Vitis riparia] Chr9 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G4080 LG-8 + View
Acer truncatum Atru.chr4.2997 chr4 - View
Actinidia chinensis Actinidia13357 Lachesis_group10 - View
Actinidia chinensis Actinidia31538 Lachesis_group17 - View
Actinidia chinensis Actinidia14257 Lachesis_group18 + View
Arabidopsis lyrata AL7G38810 scaffold_7 + View
Avicennia marina MSTRG.21767 ScioBoG_3008_HRSCAF_3015 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A3SZXW K12121 - phytochrome B (PHYB) arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T2CQE4 K12121 - phytochrome B (PHYB) arahy.Tifrunner.gnm1.Arahy.14 - View
Amborella trichopoda ATR0693G161 AmTr_v1.0_scaffold00003 + View
Brassica carinata BcaB04g18924 ChrB04 + View
Brassica carinata BcaB06g25798 ChrB06 + View
Brassica carinata BcaC01g03793 ChrC01 - View
Brassica carinata BcaC05g28834 ChrC05 - View
Brassica napus A05p32680 A05 - View
Brassica napus A03p40040 A03 + View
Brassica napus C03p48570 C03 + View
Brassica napus C05p49390 C05 - View
Brassica oleracea BolC3t17135H C3 + View
Brassica oleracea BolC5t33684H C5 - View
Brassica rapa BraA03t13152Z A03 + View
Brassica rapa BraA05t22091Z A05 - View
Beta vulgaris EL10Ac3g05509 K12121 - phytochrome B (PHYB) Chr3_EL10_PGA_scaffold7 + View
Cannabis sativa CANSAT78G1047 NC_044376.1 - View
Cicer arietinum L. Ca_00979_v3 Ca_LG1_v3 - View
Corylus avellana Haze_01300 Similar to PHYB: Phytochrome B (Nicotiana tabacum OX%3D4097) 1 + View
Coffea canephora Cc03_g00790 Phytochrome B chr3 - View
Citrus clementina Ciclev10004218m.g scaffold_9 - View
Ceratophyllum demersum CDE12G0220 10 - View
Carpinus fangiana Cfa015312 Cfa06 - View
Cardamine hirsuta CARHR092300 Phytochrome B Chr3 + View
Carya illinoinensis CiPaw.01G138400 K12121 - phytochrome B (PHYB) Chr01 - View
Citrullus lanatus ClCG05G006570 Phytochrome CG_Chr05 + View
Cucumis melo MELO3C006717.2 Phytochrome chr06 + View
Corchorus olitorius COL.COLO4_34612 hypothetical protein AWUE01022414.1 - View
Carica papaya Cpa.g.sc9.54 supercontig_9 - View
Chenopodium quinoa AUR62016209 PHYB: Phytochrome B C_Quinoa_Scaffold_3256 + View
Chenopodium quinoa AUR62039279 PHYB: Phytochrome B C_Quinoa_Scaffold_2177 - View
Cucumis sativus L. CsaV3_3G015190 Phytochrome chr3 + View
Daucus carota DCAR_026982 hypothetical protein DCARv2_Chr8 - View
Daucus carota DCAR_030471 hypothetical protein DCARv2_Chr9 - View
Davidia involucrata Dinv44284 GWHABJS00000014 + View
Davidia involucrata Dinv15165 GWHABJS00000016 - View
Durio zibethinus Duzib052G0473 NW_019167849.1 + View
Durio zibethinus Duzib151G0400 NW_019167904.1 + View
Erigeron canadensis ECA233G1443 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.A00380 Chr01 - View
Erythranthe guttata Migut.G00063 scaffold_7 + View
Erythranthe guttata Migut.N00041 scaffold_14 - View
Eutrema salsugineum Thhalv10019978m.g K12121 - phytochrome B (PHYB) scaffold_13 - View
Fragaria x ananassa FAN12G2724 K12121 - phytochrome B (PHYB) Fvb4-3 - View
Fragaria x ananassa FAN07G2275 K12121 - phytochrome B (PHYB) Fvb4-4 - View
Fragaria vesca FvH4_4g19750 K12121 - phytochrome B (PHYB) Fvb4 + View
Gossypium hirsutum Gohir.A10G172500 K12121 - phytochrome B (PHYB) A10 + View
Gossypium hirsutum Gohir.D10G179000 K12121 - phytochrome B (PHYB) D10 + View
Glycine max Glyma.09G035500 K12121 - phytochrome B (PHYB) Gm09 - View
Glycine max Glyma.15G140000 K12121 - phytochrome B (PHYB) Gm15 - View
Gossypium raimondii Gorai.011G200200 Chr11 + View
Lupinus albus Lalb_Chr18g0058671 K12121 - phytochrome B (PHYB) Lalb_Chr18 - View
Lupinus albus Lalb_Chr20g0120841 K12121 - phytochrome B (PHYB) Lalb_Chr20 - View
Lotus japonicus Lj6g0004822 K12121 - phytochrome B (PHYB) chr6 - View
Lonicera japonica Lj6C691G13 GWHAAZE00000006 + View
Lonicera japonica Lj3C831T9 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_1_41100 K12121 - phytochrome B (PHYB) Lsat_1_v8_lg_1 - View
Magnolia biondii MBI18_g37556_MAGBIO AED:0.04 Chr18 - View
Magnolia biondii MBI19_g03246_MAGBIO AED:0.03 Chr19 - View
Malus domestica MD16G1153800 phytochrome B Chr16 - View
Malus domestica MD13G1153400 phytochrome B Chr13 - View
Manihot esculenta Manes.03G205100 Chromosome03 + View
Medicago truncatula Medtr2g034040 phytochrome protein B chr2 - View
Nelumbo nucifera Nn4g25561 chr4 - View
Oryza sativa ssp. japonica Os03g0309200 Phytochrome B, Control of deetiolation and flowering, Transduction of the night break (NB) signal to inhibit flowering, Regulation of critical day length Similar to Phytochrome B. chr03 + View
Petunia axillaris Peaxi162Scf00228g00320 phytochrome B Peaxi162Scf00228 + View
Punica granatum PGR004G1575 NC_045131.1 - View
Prunus persica Prupe.1G117000 K12121 - phytochrome B (PHYB) Pp01 - View
Papaver somniferum PSO761G0612 NW_020622381.1 + View
Papaver somniferum PSO210G3214 NC_039359.1 - View
Populus trichocarpa Potri.010G145900 K12121 - phytochrome B (PHYB) Chr10 + View
Populus trichocarpa Potri.008G105200 K12121 - phytochrome B (PHYB) Chr08 - View
Phaseolus vulgaris Phvul.006G118200 K12121 - phytochrome B (PHYB) Chr06 + View
Quercus lobata QL06p012343 6 + View
Rosa chinensis RcHm_v2.0_Chr4g0425301 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim04G0239100 chr04 + View
Striga asiatica SGA_v2.0_scaffold104G30074 scaffold104 - View
Salix brachista Sabra10G0112400 GWHAAZH00000010 + View
Salix brachista Sabra08G0079400 GWHAAZH00000008 - View
Simmondsia chinensis Sc25g0003250 GWHAASQ00000025 - View
Sechium edule Sed0011961 LG12 - View
Sechium edule Sed0024815 LG02 - View
Solanum lycopersicum Solyc01g059870.4 phytochrome B1 SL4.0ch01 - View
Schrenkiella parvula Sp3g15270 K12121 - phytochrome B (PHYB) ch3-1 + View
Solanum pennellii Sopen01g025180 Phytochrome B - Solanum tuberosum (Potato), Red/far-red photoreceptor involved in the regulation of de-etiolation. Exists in two inter-convertible forms: Pr and Pfr (active). Involved in the light-promotion of seed germination and in the shade avoidance response. | phytochrome B (PHYB) | CONTAINS InterPro DOMAIN/s: Phytochrome, central region , Signal transduction histidine kinase, core , PAS fold , PAS , Phytochrome chromophore attachment domain , ATPase-like, ATP-binding domain , PAS fold-2 , Phytochrome A/B/C/D/E , Phytochrome , Phytochrome chromophore binding site , Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain , GAF | BEST Arabidopsis thaliana protein match is: phytochrome D Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400024017 Phytochrome B ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400027211 Phytochrome B2 ST4.03ch05 - View
Selenicereus undatus Hund03127 Scaffold_19641 + View
Selenicereus undatus Hund11977 Scaffold_33679 + View
Trochodendron aralioides TAR633G0200 group2 + View
Trochodendron aralioides TAR362G0512 group17 - View
Theobroma cacao Thecc.04G301100 Phytochrome B Chromosome_4 + View
Tarenaya hassleriana THA.LOC104820305 phytochrome B NW_010966178.1 + View
Vaccinium macrocarpon vmacro08044 Similar to PHYB: Phytochrome B (Nicotiana tabacum OX%3D4097) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G1101 CM024075.1 - View
Vitis vinifera GSVIVG01034989001 chr5 - View
Zea mays Zm00001eb014850 Zm00001e001462 Phytochrome Phytochrome B 1 + View