Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0028474 hypothetical protein JCGZ_13735 [Jatropha curcas] Chr7 + View
CSS0049509 BAH and coiled-coil domain-containing protein 1 [Morus notabilis] Chr5 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G4290 LG-6 - View
Aethionema arabicum Aa31LG9G9890 LG-9 - View
Acer truncatum Atru.chr10.2277 chr10 - View
Acer truncatum Atru.chr6.3239 chr6 - View
Actinidia chinensis Actinidia26882 Lachesis_group0 - View
Actinidia chinensis Actinidia02335 Lachesis_group20 - View
Arabidopsis lyrata AL7G31550 scaffold_7 + View
Arabidopsis lyrata AL6G47850 scaffold_6 + View
Avicennia marina MSTRG.14626 ScioBoG_18782_HRSCAF_18867 + View
Amaranthus hybridus Ah.09g234530 AmaHy_arrow1_Scaffold_9 + View
Amaranthus hybridus Ah.14g087850 AmaHy_arrow1_Scaffold_14 + View
Aquilegia oxysepala Aqoxy1G02963 CHR01 - View
Arabidopsis thaliana AT4G22140 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein EARLY BOLTING IN SHORT DAYS (EBS)%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%3B INVOLVED IN: positive regulation of flower development%2C regulation of transcription%2C DNA-dependent%2C seed germination%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C Bromo adjacent homology (BAH) domain (InterPro:IPR001025)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1)%3B Has 1958 Blast hits to 1898 proteins in 183 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1059%3B Fungi - 271%3B Plants - 475%3B Viruses - 0%3B Other Eukaryotes - 153 (source: NCBI BLink). EARLY BOLTING IN SHORT DAYS (EBS)%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%3B INVOLVED IN: positive regulation of flower development%2C regulation of transcription%2C DNA-dependent%2C seed germination%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C Bromo adjacent homology (BAH) domain (InterPro:IPR001025)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT4G04260 Bromo-adjacent homology (BAH) domain-containing protein Bromo-adjacent homology (BAH) domain-containing protein%3B FUNCTIONS IN: DNA binding%2C zinc ion binding%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%3B BEST Arabidopsis thaliana protein match is: PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G22140.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaNung01705 Contig593 + View
Brassica carinata BcaC09g51158 ChrC09 + View
Brassica carinata BcaC01g00767 ChrC01 - View
Brassica carinata BcaNung03760 Contig1284 + View
Brassica napus C01p16320 C01 - View
Brassica napus A01p13490 A01 - View
Brassica napus C07p51600 C07 - View
Brassica napus A03p53300 A03 - View
Brassica oleracea BolC3t20685H C3 - View
Brassica oleracea BolC1t01583H C1 - View
Brassica rapa BraA03t14398Z A03 - View
Brassica rapa BraA01t01290Z A01 - View
Beta vulgaris EL10Ac8g20127 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) Chr8_EL10_PGA_scaffold4 - View
Capsicum annuum CAN.G1014.47 PGAv.1.6.scaffold1014 + View
Cannabis sativa CANSAT56G0984 NC_044371.1 + View
Corylus avellana Haze_06855 Similar to EBS: Chromatin remodeling protein EBS (Arabidopsis thaliana OX%3D3702) 2 - View
Corylus avellana Haze_12782 Similar to EBS: Chromatin remodeling protein EBS (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc09_g01200 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein chr9 + View
Coffea canephora Cc05_g03190 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein chr5 + View
Citrus clementina Ciclev10016559m.g scaffold_2 - View
Citrus clementina Ciclev10016569m.g scaffold_2 - View
Ceratophyllum demersum CDE06G1266 4 + View
Ceratophyllum demersum CDE04G3290 2 + View
Carpinus fangiana Cfa000164 Cfa01 + View
Cardamine hirsuta CARHR253170 BAH-PHD domain-containing protein Chr8 - View
Cardamine hirsuta CARHR228970 BAH-PHD domain-containing protein Chr7 - View
Carya illinoinensis CiPaw.09G097600 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) Chr09 - View
Citrullus lanatus ClCG01G009700 BAH-PHD domain-containing protein CG_Chr01 - View
Cucumis melo MELO3C021722.2 PHD domain-containing protein/BAH domain-containing protein chr12 + View
Corchorus olitorius COL.COLO4_31829 hypothetical protein AWUE01020876.1 - View
Carica papaya Cpa.g.sc132.8 supercontig_132 - View
Carica papaya Cpa.g.sc152.54 supercontig_152 - View
Chenopodium quinoa AUR62012756 EBS: Chromatin remodeling protein EBS C_Quinoa_Scaffold_2715 - View
Chenopodium quinoa AUR62021902 EBS: Chromatin remodeling protein EBS C_Quinoa_Scaffold_1862 + View
Capsella rubella Carub.0006s3214 PTHR12505 - PHD FINGER TRANSCRIPTION FACTOR scaffold_6 + View
Capsella rubella Carub.0007s1918 PTHR12505 - PHD FINGER TRANSCRIPTION FACTOR scaffold_7 + View
Cucumis sativus L. CsaV3_1G046090 Subtilisin-like protease chr1 + View
Davidia involucrata Dinv39739 GWHABJS00000001 - View
Davidia involucrata Dinv13937 GWHABJS00000016 - View
Davidia involucrata Dinv08735 GWHABJS00000013 + View
Durio zibethinus Duzib235G0939 NW_019167982.1 - View
Durio zibethinus Duzib138G1617 NW_019167893.1 + View
Durio zibethinus Duzib133G0817 NW_019167938.1 + View
Durio zibethinus Duzib192G0159 NW_019168037.1 + View
Durio zibethinus Duzib160G0407 NW_019168015.1 - View
Durio zibethinus Duzib211G0233 NW_019168049.1 + View
Erigeron canadensis ECA236G4420 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.A01099 Chr01 + View
Eucalyptus grandis Eucgr.D01362 Chr04 - View
Eucalyptus grandis Eucgr.K00769 Chr11 + View
Erythranthe guttata Migut.M01371 scaffold_13 + View
Erythranthe guttata Migut.H01589 scaffold_8 - View
Eutrema salsugineum Thhalv10026181m.g PTHR12505 - PHD FINGER TRANSCRIPTION FACTOR scaffold_1 + View
Eutrema salsugineum Thhalv10028947m.g PTHR12505 - PHD FINGER TRANSCRIPTION FACTOR scaffold_3 - View
Fragaria x ananassa FAN14G1301 PF01426 - BAH domain (BAH) Fvb6-1 - View
Fragaria x ananassa FAN09G2026 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) Fvb6-2 - View
Fragaria x ananassa FAN21G3076 PTHR12505//PTHR12505:SF27 - PHD FINGER TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Fvb3-2 - View
Fragaria x ananassa FAN02G4010 PF01426 - BAH domain (BAH) Fvb6-4 + View
Fragaria x ananassa FAN25G2248 PTHR10795//PTHR10795:SF390 - PROPROTEIN CONVERTASE SUBTILISIN/KEXIN // SUBTILISIN-LIKE SERINE PROTEASE Fvb3-1 - View
Fragaria x ananassa FAN05G3623 PF01426 - BAH domain (BAH) Fvb6-3 - View
Fragaria vesca FvH4_3g01411 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) Fvb3 + View
Fragaria vesca FvH4_6g42580 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) Fvb6 + View
Gossypium hirsutum Gohir.A07G186825 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) A07 - View
Gossypium hirsutum Gohir.D06G157100 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) D06 - View
Gossypium hirsutum Gohir.D07G193400 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) D07 - View
Gossypium hirsutum Gohir.A05G172900 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) A05 - View
Gossypium hirsutum Gohir.A06G150900 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) A06 - View
Gossypium hirsutum Gohir.D05G175900 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) D05 - View
Gossypium raimondii Gorai.009G181300 Chr09 - View
Gossypium raimondii Gorai.010G183600 Chr10 - View
Gossypium raimondii Gorai.001G216500 Chr01 - View
Helianthus annuus HanXRQChr01g0006521 Putative bromo adjacent homology (BAH) domain; Zinc finger, RING/FYVE/PHD-type HanXRQChr01 - View
Hydrangea macrophylla Hma1.2p1_0298F.1_g117480 Hma1.2p1_0298F.1 + View
Lonicera japonica Lj8A129G85 GWHAAZE00000008 - View
Lonicera japonica Lj1A779T45 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_9_106641 Lsat_1_v8_lg_9 + View
Malus domestica MD09G1112400 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Chr09 - View
Malus domestica MD10G1326300 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Chr10 - View
Malus domestica MD05G1352300 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Chr05 - View
Malus domestica MD17G1102500 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Chr17 - View
Manihot esculenta Manes.17G027500 Chromosome17 + View
Manihot esculenta Manes.12G070900 Chromosome12 + View
Nelumbo nucifera Nn1g03396 chr1 + View
Nelumbo nucifera Nn1g07266 chr1 - View
Nicotiana tabacum Nitab4.5_0001409g0230 Zinc finger, PHD-type, conserved site, Zinc finger, PHD-finger, Zinc finger, FYVE/PHD-type, Zinc finger, RING/FYVE/PHD-type, Bromo adjacent homology (BAH) domain, Zinc finger, PHD-type Nitab4.5_0001409 - View
Petunia axillaris Peaxi162Scf00178g00015 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Peaxi162Scf00178 + View
Petunia axillaris Peaxi162Scf00708g00037 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Peaxi162Scf00708 - View
Punica granatum PGR004G0932 NC_045131.1 - View
Prunus persica Prupe.4G015400 PTHR12505 - PHD FINGER TRANSCRIPTION FACTOR Pp04 + View
Prunus persica Prupe.3G212300 Pp03 + View
Papaver somniferum PSO675G6770 NC_039358.1 - View
Papaver somniferum PSO541G6389 NC_039363.1 + View
Populus trichocarpa Potri.002G226000 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) Chr02 + View
Populus trichocarpa Potri.011G010901 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) Chr11 - View
Populus trichocarpa Potri.014G157100 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) Chr14 - View
Populus trichocarpa Potri.006G270601 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) Chr06 + View
Populus trichocarpa Potri.004G004900 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) Chr04 + View
Quercus lobata QL05p071985 5 + View
Rosa chinensis RcHm_v2.0_Chr2g0158431 RcHm_v2.0_Chr2 + View
Rosa chinensis RcHm_v2.0_Chr5g0002141 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim06G0166400 chr06 - View
Rhododendron simsii Rhsim13G0150300 chr13 + View
Salix brachista Sabra04G0002600 GWHAAZH00000004 + View
Salix brachista Sabra14G0118900 GWHAAZH00000014 - View
Salix brachista Sabra02G0172900 GWHAAZH00000002 + View
Salix brachista Sabra11G0008200 GWHAAZH00000011 - View
Simmondsia chinensis Sc17g0007570 GWHAASQ00000017 - View
Sechium edule Sed0018437 LG08 + View
Sechium edule Sed0005303 LG01 - View
Solanum lycopersicum Solyc07g049210.3 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein (AHRD V3.3 *** A0A2U1QHU8_ARTAN) SL4.0ch07 - View
Schrenkiella parvula Sp6g04540 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) ch6-1 - View
Schrenkiella parvula Sp7g20290 PF00628//PF01426 - PHD-finger (PHD) // BAH domain (BAH) ch7-4 - View
Solanum pennellii Sopen02g025770 EARLY BOLTING IN SHORT DAYS (EBS) | FUNCTIONS IN: DNA binding, zinc ion binding | INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site , Zinc finger, PHD-type , Bromo adjacent homology (BAH) domain , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400000673 Phd finger transcription factor ST4.03ch07 - View
Solanum tuberosum PGSC0003DMG400016712 Transcription factor ST4.03ch02 + View
Selenicereus undatus Hund21435 Scaffold_33680 - View
Selenicereus undatus Hund23434 Scaffold_3410 + View
Trochodendron aralioides TAR627G0838 group6 - View
Trochodendron aralioides TAR629G1404 group0 + View
Trochodendron aralioides TAR626G0820 group3 + View
Theobroma cacao Thecc.01G180600 PHD finger family protein / bromo-adjacent (BAH) domain-containing protein Chromosome_1 - View
Theobroma cacao Thecc.06G227800 PHD finger family protein / bromo-adjacent (BAH) domain-containing protein Chromosome_6 - View
Tarenaya hassleriana THA.LOC104818627 chromatin remodeling protein EBS-like isoform X1 NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104813414 chromatin remodeling protein EBS-like NW_010960187.1 - View
Tarenaya hassleriana THA.LOC104806316 chromatin remodeling protein EBS NW_010962392.1 - View
Tarenaya hassleriana THA.LOC104809479 chromatin remodeling protein EBS-like NW_010965019.1 + View
Tarenaya hassleriana THA.LOC104823537 chromatin remodeling protein EBS-like NW_010966881.1 - View
Tripterygium wilfordii TWI63G1129 NC_052240.1 + View
Tripterygium wilfordii TWI75G1013 NC_052253.1 - View
Tripterygium wilfordii TWI38G1121 NC_052252.1 + View
Tripterygium wilfordii TWI38G0938 NC_052252.1 + View
Tripterygium wilfordii TWI18G0084 NC_052241.1 + View
Vaccinium macrocarpon vmacro03666 Similar to EBS: Chromatin remodeling protein EBS (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro12173 Similar to EBS: Chromatin remodeling protein EBS (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01030487001 chr12 - View
Vitis vinifera GSVIVG01004809001 chr10_random - View