Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0036596 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Vitis vinifera] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr2.893 chr2 - View
Actinidia chinensis Actinidia39890 Lachesis_group17 - View
Arabidopsis lyrata AL1G13630 scaffold_1 + View
Amaranthus hybridus Ah.11g049630 AmaHy_arrow1_Scaffold_11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SJ0E5V PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) arahy.Tifrunner.gnm1.Arahy.12 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6BV0NH PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) arahy.Tifrunner.gnm1.Arahy.19 + View
Brassica carinata BcaC06g36759 ChrC06 + View
Beta vulgaris EL10Ac5g10418 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr5_EL10_PGA_scaffold2 + View
Corylus avellana Haze_24597 Similar to EMB1444: Pentatricopeptide repeat-containing protein At1g06143 (Arabidopsis thaliana OX%3D3702) 8 - View
Carpinus fangiana Cfa002401 Cfa01 - View
Citrullus lanatus ClCG07G000940 Pentatricopeptide repeat-containing family protein CG_Chr07 - View
Carica papaya Cpa.g.sc50.39 supercontig_50 + View
Chenopodium quinoa AUR62024732 PCMP-E57: Pentatricopeptide repeat-containing protein At1g33350 C_Quinoa_Scaffold_1992 + View
Chenopodium quinoa AUR62011891 PCMP-E57: Pentatricopeptide repeat-containing protein At1g33350 C_Quinoa_Scaffold_2008 + View
Capsella rubella Carub.0001s0318 K10683 - BRCA1-associated RING domain protein 1 [EC:6.3.2.19] (BARD1) scaffold_1 + View
Cucumis sativus L. CsaV3_3G022560 pentatricopeptide repeat-containing protein At1g06145-like chr3 + View
Davidia involucrata Dinv34601 GWHABJS00000010 + View
Durio zibethinus Duzib177G0186 NW_019168004.1 + View
Durio zibethinus Duzib138G1534 NW_019167893.1 - View
Fragaria x ananassa FAN05G3643 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-3 - View
Fragaria x ananassa FAN05G1908 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-3 + View
Fragaria x ananassa FAN20G1831 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Fvb2-3 + View
Fragaria x ananassa FAN14G0682 PF13041//PF14432 - PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-1 - View
Fragaria x ananassa FAN24G0008 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb2-2 + View
Fragaria x ananassa FAN09G1015 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-2 - View
Fragaria x ananassa FAN02G4406 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-4 + View
Fragaria x ananassa FAN15G0208 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb2-4 - View
Fragaria vesca FvH4_2g21860 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb2 - View
Gossypium hirsutum Gohir.D09G095500 PF00646//PF01535//PF13041 - F-box domain (F-box) // PPR repeat (PPR) // PPR repeat family (PPR_2) D09 - View
Gossypium hirsutum Gohir.A08G059000 K01074 - palmitoyl-protein thioesterase (PPT) A08 + View
Gossypium hirsutum Gohir.D11G134800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D11 + View
Gossypium hirsutum Gohir.A11G129000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A11 + View
Gossypium hirsutum Gohir.D08G068200 K01074 - palmitoyl-protein thioesterase (PPT) D08 + View
Glycine max Glyma.10G008061 PF13041 - PPR repeat family (PPR_2) Gm10 - View
Glycine max Glyma.03G161200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm03 + View
Gossypium raimondii Gorai.004G071400 Chr04 + View
Hydrangea macrophylla Hma1.2p1_0273F.1_g109900 Hma1.2p1_0273F.1 + View
Lupinus albus Lalb_Chr02g0142011 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr02 + View
Lonicera japonica Lj3C771T0 GWHAAZE00000003 - View
Lonicera japonica Lj2C1154T14 GWHAAZE00000002 + View
Malus domestica MD10G1186800 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr10 - View
Malus domestica MD05G1200200 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr05 - View
Manihot esculenta Manes.13G032100 Chromosome13 - View
Manihot esculenta Manes.03G156800 Chromosome03 - View
Manihot esculenta Manes.09G149300 Chromosome09 + View
Nelumbo nucifera Nn1g02697 chr1 - View
Prunus persica Prupe.8G226200 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Pp08 - View
Papaver somniferum PSO210G5447 NC_039359.1 + View
Populus trichocarpa Potri.013G044700 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr13 - View
Phaseolus vulgaris Phvul.001G159100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr01 + View
Quercus lobata QL09p037574 9 + View
Rosa chinensis RcHm_v2.0_Chr6g0288731 RcHm_v2.0_Chr6 - View
Rosa chinensis RcHm_v2.0_Chr3g0450051 RcHm_v2.0_Chr3 + View
Salix brachista Sabra13G0041100 GWHAAZH00000013 - View
Simmondsia chinensis Sc24g0003050 GWHAASQ00000024 - View
Sechium edule Sed0005411 LG05 - View
Sapria himalayana SHI09854 scaffold10_15062905 - View
Solanum lycopersicum Solyc09g066080.3 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein (AHRD V3.3 *** A0A1J3EMZ5_NOCCA) SL4.0ch09 - View
Solanum pennellii Sopen09g027850 Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent proteinñprotein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression. | breast cancer associated RING 1 (BARD1) | FUNCTIONS IN: transcription coactivator activity, DNA binding | INVOLVED IN: DNA repair, regulation of meristem structural organization, leaf development | LOCATED IN: intracellular | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, PHD-type , BRCT | BEST Arabidopsis thaliana protein match is: breast cancer susceptibility1 Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400016279 Pentatricopeptide repeat-containing protein ST4.03ch06 - View
Selenicereus undatus Hund09594 Scaffold_10417 - View
Trochodendron aralioides TAR362G1196 group17 - View
Theobroma cacao Thecc.05G276200 Tetratricopeptide repeat-like superfamily protein Chromosome_5 + View
Theobroma cacao Thecc.01G261400 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_1 + View
Tripterygium wilfordii TWI18G1218 NC_052241.1 + View
Utricularia gibba unitig_32.g10828 unitig_32 + View
Vigna mungo VMungo1080G0400 CM024079.1 + View
Vigna mungo VMungo0720G0324 CM024071.1 - View