Gene: Solyc09g066080.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g066080.3
  • Transcript Identifier Solyc09g066080.3.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 60535826-60544805 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g066080.3.1
  • uniprot A0A3Q7J0E1
  • gene_id Solyc09g066080

Descriptions

  • Description Protein BREAST CANCER SUSCEPTIBILITY 1-like protein (AHRD V3.3 *** A0A1J3EMZ5_NOCCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006974
IEA
InterProcellular response to DNA damage stimulus
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0035066
IBA
GOA Databasepositive regulation of histone acetylation
GO:0035067
IBA
GOA Databasenegative regulation of histone acetylation
GO:0045717
IBA
GOA Databasenegative regulation of fatty acid biosynthetic process
GO:0045944
IBA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0000724
IBA
GOA Databasedouble-strand break repair via homologous recombination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IBA
GOA Databaseubiquitin-protein transferase activity
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000001

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070531
IBA
GOA DatabaseBRCA1-A complex
GO:0031436
IBA
GOA DatabaseBRCA1-BARD1 complex
GO:0005886
IBA
GOA Databaseplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031099 BRCA1-associated
IPR036420 BRCT domain superfamily
IPR001357 BRCT domain
IPR001965 Zinc finger, PHD-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
14.3.1.1 DNA damage response.homologous recombination repair (HR).BRCA1-BARD1 DNA-damage response heterodimer.component BRCA1/BARD1