Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0014315 PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform X1 [Vitis vinifera] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia28055 Lachesis_group16 - View
Actinidia chinensis Actinidia06561 Lachesis_group16 - View
Arabidopsis lyrata AL4G11800 scaffold_4 - View
Avicennia marina MSTRG.16585 ScioBoG_19743_HRSCAF_19834 - View
Amaranthus hybridus Ah.01g022330 Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.4.19.12) (Deubiquitinating enzyme 4) (AtUBP4) (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) AmaHy_arrow1_Scaffold_1 + View
Aquilegia oxysepala Aqoxy6G00781 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7P1RA8 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) arahy.Tifrunner.gnm1.Arahy.20 + View
Arabidopsis thaliana AT2G22310 ubiquitin-specific protease 4 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 4 (UBP4)%3B CONTAINS InterPro DOMAIN/s: Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 3 (TAIR:AT4G39910.1)%3B Has 8879 Blast hits to 7429 proteins in 247 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 4505%3B Fungi - 1682%3B Plants - 966%3B Viruses - 3%3B Other Eukaryotes - 1719 (source: NCBI BLink). Chr2 - View
Beta vulgaris EL10Ac9g21480 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Chr9_EL10_PGA_scaffold8 - View
Capsicum annuum CAN.G523.66 PGAv.1.6.scaffold523 + View
Coffea canephora Cc02_g21510 Ubiquitin carboxyl-terminal hydrolase 3 chr2 + View
Ceratophyllum demersum CDE10G0650 8 + View
Cardamine hirsuta CARHR113540 Ubiquitin carboxyl-terminal hydrolase Chr4 - View
Carya illinoinensis CiPaw.03G142600 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Chr03 - View
Chenopodium quinoa AUR62010137 UBP3: Ubiquitin carboxyl-terminal hydrolase 3 C_Quinoa_Scaffold_1257 - View
Chenopodium quinoa AUR62003801 UBP3: Ubiquitin carboxyl-terminal hydrolase 3 C_Quinoa_Scaffold_2370 - View
Chenopodium quinoa AUR62013129 UBP3: Ubiquitin carboxyl-terminal hydrolase 3 C_Quinoa_Scaffold_1040 - View
Capsella rubella Carub.0004s0147 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) scaffold_4 - View
Daucus carota DCAR_021861 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_014216 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv24188 GWHABJS00000005 + View
Durio zibethinus Duzib187G0270 NW_019167860.1 - View
Durio zibethinus Duzib147G1491 NW_019168470.1 - View
Erigeron canadensis ECA234G3465 Conyza_canadensis_scaffold:4 - View
Erigeron canadensis ECA240G1038 Conyza_canadensis_scaffold:5 - View
Erythranthe guttata Migut.B00608 scaffold_2 + View
Erythranthe guttata Migut.N01068 scaffold_14 - View
Eutrema salsugineum Thhalv10000204m.g K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) scaffold_15 - View
Fragaria x ananassa FAN26G1771 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Fvb1-2 + View
Fragaria x ananassa FAN19G1805 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Fvb1-4 + View
Fragaria vesca FvH4_1g20720 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Fvb1 + View
Glycine max Glyma.18G016800 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Gm18 + View
Glycine max Glyma.08G135100 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Gm08 + View
Helianthus annuus HanXRQChr10g0295891 Putative ubiquitin specific protease domain HanXRQChr10 - View
Hydrangea macrophylla Hma1.2p1_0704F.1_g206630 Hma1.2p1_0704F.1 + View
Hydrangea macrophylla Hma1.2p1_0522F.1_g171670 Hma1.2p1_0522F.1 - View
Lotus japonicus Lj6g0008846 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) chr6 + View
Lonicera japonica Lj9C353T7 GWHAAZE00000009 + View
Lonicera japonica Lj4C892G7 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_5_107881 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Lsat_1_v8_lg_5 - View
Magnolia biondii MBI05_g37051_MAGBIO AED:0.19 Chr05 - View
Magnolia biondii MBI02_g35764_MAGBIO AED:0.39 Chr02 - View
Medicago truncatula Medtr3g087140 ubiquitin carboxyl-terminal hydrolase chr3 + View
Nicotiana tabacum Nitab4.5_0002533g0090 Ubiquitin carboxyl-terminal hydrolases family 2, Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site Nitab4.5_0002533 - View
Nicotiana tabacum Nitab4.5_0001619g0040 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site, Ubiquitin carboxyl-terminal hydrolases family 2 Nitab4.5_0001619 + View
Olea europaea Oeu002171.1 chr14 + View
Petunia axillaris Peaxi162Scf00001g00110 Ubiquitin carboxyl-terminal hydrolase 4 Peaxi162Scf00001 + View
Prunus persica Prupe.6G187800 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Pp06 - View
Populus trichocarpa Potri.005G074900 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Chr05 + View
Populus trichocarpa Potri.007G093600 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Chr07 - View
Quercus lobata QL06p049284 6 + View
Rhododendron simsii Rhsim05G0106700 chr05 + View
Rhododendron simsii Rhsim08G0010900 chr08 - View
Salix brachista Sabra05G0061600 GWHAAZH00000005 + View
Salix brachista Sabra07G0077500 GWHAAZH00000007 - View
Solanum lycopersicum Solyc01g105240.3 Ubiquitin carboxyl-terminal hydrolase 46 (AHRD V3.3 *** A0A2G2VAM8_CAPBA) SL4.0ch01 - View
Schrenkiella parvula Sp4g01360 PTHR24006:SF469 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 ch4-1 - View
Solanum pennellii Sopen01g047750 Encodes a nuclear ubiquitin-specific protease. | ubiquitin-specific protease 3 (UBP3) | CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 | BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400012557 Ubiquitin carboxyl-terminal hydrolase ST4.03ch01 - View
Selenicereus undatus Hund00064 Scaffold_33678 - View
Selenicereus undatus Hund06380 Scaffold_33676 + View
Trochodendron aralioides TAR381G1209 group11 + View
Trochodendron aralioides TAR376G0991 group14 - View
Trochodendron aralioides TAR625G1185 group4 - View
Tarenaya hassleriana THA.LOC104807863 ubiquitin carboxyl-terminal hydrolase 3 isoform X1 NW_010963495.1 + View
Tripterygium wilfordii TWI74G0008 NC_052234.1 + View
Tripterygium wilfordii TWI53G0010 NC_052244.1 - View
Vaccinium macrocarpon vmacro19932 Similar to UBP3: Ubiquitin carboxyl-terminal hydrolase 3 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View