Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr9.2405 | chr9 | + | View | |
Actinidia chinensis | Actinidia34958 | Lachesis_group2 | - | View | |
Avicennia marina | MSTRG.11424 | ScioBoG_14204_HRSCAF_14270 | + | View | |
Avicennia marina | MSTRG.23087 | ScioBoG_3703_HRSCAF_3719 | - | View | |
Aquilegia oxysepala | Aqoxy3G03104 | CHR03 | - | View | |
Brassica napus | A06p19830 | A06 | - | View | |
Beta vulgaris | EL10Ac5g10825 | PTHR23315:SF127 - U-BOX DOMAIN-CONTAINING PROTEIN 40 | Chr5_EL10_PGA_scaffold2 | - | View |
Capsicum annuum | CAN.G853.12 | PGAv.1.6.scaffold853 | - | View | |
Capsicum annuum | CAN.G206.57 | PGAv.1.6.scaffold206 | - | View | |
Cicer arietinum L. | Ca_16208_v3 | Ca_LG5_v3 | - | View | |
Corylus avellana | Haze_14628 | Similar to PUB40: U-box domain-containing protein 40 (Arabidopsis thaliana OX%3D3702) | 5 | + | View |
Corylus avellana | Haze_07440 | Similar to PUB38: U-box domain-containing protein 38 (Arabidopsis thaliana OX%3D3702) | 4 | + | View |
Coffea canephora | Cc07_g02600 | U-box domain-containing protein 40 | chr7 | - | View |
Citrus clementina | Ciclev10019643m.g | scaffold_3 | + | View | |
Carpinus fangiana | Cfa019069 | Cfa08 | + | View | |
Carya illinoinensis | CiPaw.11G031500 | PTHR23315:SF98 - U-BOX DOMAIN-CONTAINING PROTEIN 38-RELATED | Chr11 | - | View |
Carya illinoinensis | CiPaw.12G023300 | PTHR23315//PTHR23315:SF98 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 38-RELATED | Chr12 | + | View |
Carya illinoinensis | CiPaw.03G034600 | PTHR23315//PTHR23315:SF127 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 40 | Chr03 | + | View |
Citrullus lanatus | ClCG01G014110 | U-box domain-containing protein | CG_Chr01 | - | View |
Citrullus lanatus | ClCG06G016710 | U-box domain-containing protein | CG_Chr06 | - | View |
Cucumis melo | MELO3C002240.2 | RING-type E3 ubiquitin transferase | chr12 | - | View |
Cucumis melo | MELO3C017121.2 | RING-type E3 ubiquitin transferase | chr02 | - | View |
Corchorus olitorius | COL.COLO4_04322 | Armadillo | AWUE01011326.1 | + | View |
Carica papaya | Cpa.g.sc35.60 | supercontig_35 | + | View | |
Carica papaya | Cpa.g.sc14.85 | supercontig_14 | + | View | |
Chenopodium quinoa | AUR62008281 | PUB38: U-box domain-containing protein 38 | C_Quinoa_Scaffold_3422 | - | View |
Chenopodium quinoa | AUR62031041 | PUB38: U-box domain-containing protein 38 | C_Quinoa_Scaffold_2689 | - | View |
Cucumis sativus L. | CsaV3_1G001800 | RING-type E3 ubiquitin transferase | chr1 | + | View |
Cucumis sativus L. | CsaV3_1G008240 | RING-type E3 ubiquitin transferase | chr1 | + | View |
Daucus carota | DCAR_016505 | hypothetical protein | DCARv2_Chr5 | - | View |
Davidia involucrata | Dinv20696 | GWHABJS00000006 | + | View | |
Davidia involucrata | Dinv33526 | GWHABJS00000014 | - | View | |
Durio zibethinus | Duzib068G0980 | NW_019167838.1 | - | View | |
Durio zibethinus | Duzib084G0245 | NW_019167827.1 | - | View | |
Durio zibethinus | Duzib205G0953 | NW_019168381.1 | - | View | |
Erigeron canadensis | ECA232G2746 | Conyza_canadensis_scaffold:2 | + | View | |
Eucalyptus grandis | Eucgr.I01874 | Chr09 | - | View | |
Eucalyptus grandis | Eucgr.K02878 | Chr11 | - | View | |
Eucalyptus grandis | Eucgr.B00340 | Chr02 | + | View | |
Erythranthe guttata | Migut.I00054 | scaffold_9 | + | View | |
Fragaria x ananassa | FAN18G4395 | PTHR23315//PTHR23315:SF98 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 38-RELATED | Fvb5-1 | + | View |
Fragaria x ananassa | FAN09G2357 | PTHR23315//PTHR23315:SF127 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 40 | Fvb6-2 | - | View |
Fragaria x ananassa | FAN05G2933 | PTHR23315//PTHR23315:SF127 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 40 | Fvb6-3 | - | View |
Fragaria x ananassa | FAN08G0536 | PF00514//PF00730//PF04564 - Armadillo/beta-catenin-like repeat (Arm) // HhH-GPD superfamily base excision DNA repair protein (HhH-GPD) // U-box domain (U-box) | Fvb5-3 | - | View |
Fragaria x ananassa | FAN13G1329 | KOG4646 - Uncharacterized conserved protein, contains ARM repeats | Fvb5-2 | + | View |
Fragaria x ananassa | FAN14G5528 | PTHR23315:SF127 - U-BOX DOMAIN-CONTAINING PROTEIN 40 | Fvb6-1 | - | View |
Fragaria x ananassa | FAN02G2609 | PTHR23315:SF127 - U-BOX DOMAIN-CONTAINING PROTEIN 40 | Fvb6-4 | + | View |
Fragaria vesca | FvH4_6g50090 | PTHR23315//PTHR23315:SF127 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 40 | Fvb6 | + | View |
Fragaria vesca | FvH4_5g16420 | PTHR23315//PTHR23315:SF98 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 38-RELATED | Fvb5 | + | View |
Glycine max | Glyma.13G069300 | PTHR23315//PTHR23315:SF127 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 40 | Gm13 | + | View |
Glycine max | Glyma.06G185400 | PTHR23315:SF98 - U-BOX DOMAIN-CONTAINING PROTEIN 38-RELATED | Gm06 | - | View |
Glycine max | Glyma.19G013500 | PTHR23315//PTHR23315:SF127 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 40 | Gm19 | - | View |
Glycine max | Glyma.04G179300 | PTHR23315:SF98 - U-BOX DOMAIN-CONTAINING PROTEIN 38-RELATED | Gm04 | + | View |
Hydrangea macrophylla | Hma1.2p1_0002F.1_g002790 | Hma1.2p1_0002F.1 | - | View | |
Lotus japonicus | Lj2g0028002 | PTHR23315:SF127 - U-BOX DOMAIN-CONTAINING PROTEIN 40 | chr2 | + | View |
Lotus japonicus | Lj1g0013481 | PTHR23315//PTHR23315:SF98 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 38-RELATED | chr1 | + | View |
Lonicera japonica | Lju41C30T3 | GWHAAZE00000094 | + | View | |
Lonicera japonica | Lj5P121T25 | GWHAAZE00000005 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_4_73401 | PTHR23315:SF98 - U-BOX DOMAIN-CONTAINING PROTEIN 38-RELATED | Lsat_1_v8_lg_4 | + | View |
Malus domestica | MD14G1186000 | plant U-box 38 | Chr14 | - | View |
Malus domestica | MD09G1039200 | RING/U-box superfamily protein with ARM repeat domain | Chr09 | - | View |
Malus domestica | MD17G1040200 | RING/U-box superfamily protein with ARM repeat domain | Chr17 | - | View |
Malus domestica | MD06G1180900 | plant U-box 38 | Chr06 | - | View |
Manihot esculenta | Manes.06G100900 | Chromosome06 | + | View | |
Medicago truncatula | Medtr3g078340 | armadillo/beta-catenin repeat protein | chr3 | - | View |
Nelumbo nucifera | Nn4g22910 | chr4 | - | View | |
Nelumbo nucifera | Nn3g17002 | chr3 | - | View | |
Nicotiana tabacum | Nitab4.5_0001642g0030 | Armadillo, U box domain, Zinc finger, RING/FYVE/PHD-type, Armadillo-like helical, Armadillo-type fold | Nitab4.5_0001642 | + | View |
Olea europaea | Oeu016336.1 | chr18 | - | View | |
Petunia axillaris | Peaxi162Scf00017g00256 | U-box domain-containing protein 38 | Peaxi162Scf00017 | - | View |
Punica granatum | PGR083G0164 | NC_045133.1 | - | View | |
Punica granatum | PGR044G1285 | NC_045134.1 | + | View | |
Prunus persica | Prupe.5G178900 | PTHR23315:SF98 - U-BOX DOMAIN-CONTAINING PROTEIN 38-RELATED | Pp05 | - | View |
Prunus persica | Prupe.3G278800 | PTHR23315:SF127 - U-BOX DOMAIN-CONTAINING PROTEIN 40 | Pp03 | + | View |
Papaver somniferum | PSO832G0448 | NC_039367.1 | - | View | |
Populus trichocarpa | Potri.012G076400 | PTHR23315:SF98 - U-BOX DOMAIN-CONTAINING PROTEIN 38-RELATED | Chr12 | + | View |
Populus trichocarpa | Potri.015G071200 | PTHR23315:SF98 - U-BOX DOMAIN-CONTAINING PROTEIN 38-RELATED | Chr15 | + | View |
Phaseolus vulgaris | Phvul.009G181600 | PTHR23315:SF98 - U-BOX DOMAIN-CONTAINING PROTEIN 38-RELATED | Chr09 | - | View |
Quercus lobata | QL10p012420 | 10 | + | View | |
Quercus lobata | QL02p078154 | CM012294 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr2g0170361 | RcHm_v2.0_Chr2 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr7g0179681 | RcHm_v2.0_Chr7 | - | View | |
Rhododendron simsii | Rhsim12G0161800 | chr12 | - | View | |
Striga asiatica | SGA_v2.0_scaffold467G52028 | scaffold467 | + | View | |
Salix brachista | Sabra15G0095200 | GWHAAZH00000015 | + | View | |
Sechium edule | Sed0004810 | LG12 | + | View | |
Sechium edule | Sed0002427 | LG01 | - | View | |
Solanum lycopersicum | Solyc03g113870.1 | RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3AWB5_CAPCH) | SL4.0ch03 | + | View |
Solanum lycopersicum | Solyc02g087200.2 | RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2XIC9_CAPBA) | SL4.0ch02 | - | View |
Solanum pennellii | Sopen03g032930 | Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. | plant U-box 38 (PUB38) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: protein ubiquitination | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: stem | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein with ARM repeat domain | Spenn-ch03 | + | View |
Solanum pennellii | Sopen02g031940 | RING/U-box superfamily protein with ARM repeat domain | FUNCTIONS IN: ubiquitin-protein ligase activity, binding | INVOLVED IN: protein ubiquitination | LOCATED IN: ubiquitin ligase complex, chloroplast | EXPRESSED IN: 7 plant structures | EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: plant U-box 38 | Spenn-ch02 | - | View |
Solanum tuberosum | PGSC0003DMG400024471 | Ubiquitin-protein ligase | ST4.03ch03 | + | View |
Trochodendron aralioides | TAR371G0029 | group13 | - | View | |
Trochodendron aralioides | TAR622G0531 | group8 | + | View | |
Trochodendron aralioides | TAR629G2717 | group0 | + | View | |
Trochodendron aralioides | TAR374G1711 | group12 | + | View | |
Theobroma cacao | Thecc.03G005000 | Plant U-box 38 | Chromosome_3 | + | View |
Tarenaya hassleriana | THA.LOC104805417 | U-box domain-containing protein 40 | NW_010961290.1 | - | View |
Tarenaya hassleriana | THA.LOC104809257 | U-box domain-containing protein 38 | NW_010965019.1 | - | View |
Tripterygium wilfordii | TWI12G0963 | NC_052243.1 | - | View | |
Tripterygium wilfordii | TWI60G0942 | NC_052246.1 | + | View | |
Tripterygium wilfordii | TWI15G0958 | NC_052247.1 | + | View | |
Vaccinium macrocarpon | vmacro05791 | Similar to PUB40: U-box domain-containing protein 40 (Arabidopsis thaliana OX%3D3702) | chr12_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vigna mungo | VMungo1309G0204 | CM024072.1 | + | View | |
Vigna mungo | VMungo0464G2176 | CM024077.1 | - | View |