Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0000902 PREDICTED: polyadenylate-binding protein 2-like [Phoenix dactylifera] Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G13230 LG-8 + View
Acer truncatum Atru.chr3.282 chr3 + View
Acer truncatum Atru.chr5.2639 chr5 + View
Acer truncatum Atru.chr13.727 chr13 - View
Actinidia chinensis Actinidia12931 Lachesis_group2 - View
Arabidopsis lyrata AL3G47250 scaffold_3 + View
Arabidopsis lyrata AL7G17280 scaffold_7 - View
Arabidopsis lyrata AL3G32750 scaffold_3 + View
Avicennia marina MSTRG.27737 ScioBoG_94932_HRSCAF_95134 - View
Amaranthus hybridus Ah.01g017920 Polyadenylate-binding protein 8 (PABP-8) (Poly(A)-binding protein 8) AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy6G01254 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AVGT3S PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT4G34110 poly(A) binding protein 2 Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins. poly(A) binding protein 2 (PAB2)%3B FUNCTIONS IN: RNA binding%2C translation initiation factor activity%3B INVOLVED IN: response to salt stress%2C translational initiation%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 17 growth stages%3B CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Polyadenylate binding protein%2C human types 1%2C 2%2C 3%2C 4 (InterPro:IPR006515)%2C Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2)%3B Has 987994 Blast hits to 947802 proteins in 35008 species: Archae - 20430%3B Bacteria - 568582%3B Metazoa - 213912%3B Fungi - 30250%3B Plants - 62241%3B Viruses - 64851%3B Other Eukaryotes - 27728 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT3G19350 maternally expressed pab C-terminal Encodes a the C-terminal domain of poly(A) binding proteins. MPC is imprinted such that only the maternal allele is expressed in the endosperm. MPC is silenced by the action of MET1 and its expression is promoted by DEM. maternally expressed pab C-terminal (MPC)%3B CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein (InterPro:IPR002004)%3B BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 (TAIR:AT1G49760.2)%3B Has 865 Blast hits to 863 proteins in 191 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 523%3B Fungi - 105%3B Plants - 148%3B Viruses - 0%3B Other Eukaryotes - 89 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC05g28492 ChrC05 - View
Brassica napus C03p86100 C03 - View
Brassica napus C05p45780 C05 - View
Brassica napus A08p17140 A08 - View
Beta vulgaris EL10Ac9g22321 K13126 - polyadenylate-binding protein (PABPC) Chr9_EL10_PGA_scaffold8 + View
Capsicum annuum CAN.G1231.30 PGAv.1.6.scaffold1231 + View
Cannabis sativa CANSAT25G1193 NC_044370.1 - View
Cicer arietinum L. Ca_18712_v3 Ca_LG6_v3 - View
Corylus avellana Haze_15370 Similar to PAB2: Polyadenylate-binding protein 2 (Arabidopsis thaliana OX%3D3702) 11 + View
Corylus avellana Haze_10113 Similar to PAB2: Polyadenylate-binding protein 2 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc02_g19020 Polyadenylate-binding protein 2 chr2 - View
Citrus clementina Ciclev10025109m.g scaffold_7 - View
Citrus clementina Ciclev10027999m.g scaffold_8 + View
Carpinus fangiana Cfa004043 Cfa01 - View
Carpinus fangiana Cfa004548 Cfa02 - View
Cardamine hirsuta CARHR105810 Polyadenylate-binding protein, putative Chr3 + View
Carya illinoinensis CiPaw.02G006600 KOG0123 - Polyadenylate-binding protein (RRM superfamily) Chr02 - View
Carya illinoinensis CiPaw.05G008500 K13126 - polyadenylate-binding protein (PABPC) Chr05 - View
Citrullus lanatus ClCG02G006080 Polyadenylate-binding protein, putative CG_Chr02 - View
Cucumis melo MELO3C018462.2 Polyadenylate-binding protein chr01 - View
Carica papaya Cpa.g.sc55.115 supercontig_55 + View
Carica papaya Cpa.g.sc200.24 supercontig_200 + View
Chenopodium quinoa AUR62010255 PAB8: Polyadenylate-binding protein 8 C_Quinoa_Scaffold_1257 - View
Chenopodium quinoa AUR62013237 PAB8: Polyadenylate-binding protein 8 C_Quinoa_Scaffold_1040 - View
Capsella rubella Carub.0007s0631 PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_7G008460 Polyadenylate-binding protein chr7 + View
Daucus carota DCAR_022009 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_029076 hypothetical protein DCARv2_Chr9 - View
Davidia involucrata Dinv42174 GWHABJS00000002 + View
Davidia involucrata Dinv15737 GWHABJS00000005 - View
Durio zibethinus Duzib187G0139 NW_019167860.1 + View
Durio zibethinus Duzib052G1236 NW_019167849.1 + View
Durio zibethinus Duzib147G0577 NW_019168470.1 + View
Durio zibethinus Duzib132G0741 NW_019167915.1 - View
Erigeron canadensis ECA234G4170 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA236G2896 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.I01129 Chr09 + View
Erythranthe guttata Migut.N01177 scaffold_14 + View
Erythranthe guttata Migut.B00368 scaffold_2 - View
Eutrema salsugineum Thhalv10021769m.g PF00658 - Poly-adenylate binding protein, unique domain (PABP) scaffold_13 - View
Eutrema salsugineum Thhalv10024683m.g PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED scaffold_1 - View
Fragaria x ananassa FAN15G2199 K13126 - polyadenylate-binding protein (PABPC) Fvb2-4 + View
Fragaria x ananassa FAN27G0149 K13126 - polyadenylate-binding protein (PABPC) Fvb2-1 + View
Fragaria x ananassa FAN27G2027 PF00076//PF00658//PF00931 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) // NB-ARC domain (NB-ARC) Fvb2-1 + View
Fragaria x ananassa FAN24G0461 PF00076//PF00658//PF00931 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) // NB-ARC domain (NB-ARC) Fvb2-2 - View
Fragaria x ananassa FAN20G2054 K13126 - polyadenylate-binding protein (PABPC) Fvb2-3 - View
Fragaria x ananassa FAN20G2908 K13126 - polyadenylate-binding protein (PABPC) Fvb2-3 - View
Fragaria x ananassa FAN15G3640 PF00076//PF00658//PF00931 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) // NB-ARC domain (NB-ARC) Fvb2-4 + View
Fragaria vesca FvH4_2g05720 K13126 - polyadenylate-binding protein (PABPC) Fvb2 + View
Gossypium hirsutum Gohir.A13G042600 K13126 - polyadenylate-binding protein (PABPC) A13 - View
Gossypium hirsutum Gohir.D13G041000 K13126 - polyadenylate-binding protein (PABPC) D13 - View
Gossypium hirsutum Gohir.A03G187700 K13126 - polyadenylate-binding protein (PABPC) A03 + View
Gossypium hirsutum Gohir.D02G208500 K13126 - polyadenylate-binding protein (PABPC) D02 + View
Gossypium hirsutum Gohir.A05G204300 K13126 - polyadenylate-binding protein (PABPC) A05 - View
Gossypium hirsutum Gohir.D05G207500 K13126 - polyadenylate-binding protein (PABPC) D05 - View
Glycine max Glyma.07G215300 PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED Gm07 - View
Glycine max Glyma.02G103900 PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED Gm02 - View
Gossypium raimondii Gorai.005G236500 Chr05 + View
Gossypium raimondii Gorai.013G046000 Chr13 - View
Hydrangea macrophylla Hma1.2p1_0474F.1_g160570 Hma1.2p1_0474F.1 - View
Hydrangea macrophylla Hma1.2p1_0370F.1_g137580 Hma1.2p1_0370F.1 + View
Lupinus albus Lalb_Chr05g0219321 PF00658 - Poly-adenylate binding protein, unique domain (PABP) Lalb_Chr05 - View
Lupinus albus Lalb_Chr16g0384871 PF00658 - Poly-adenylate binding protein, unique domain (PABP) Lalb_Chr16 - View
Lupinus albus Lalb_Chr09g0328431 K13126 - polyadenylate-binding protein (PABPC) Lalb_Chr09 - View
Lotus japonicus Lj4g0016078 K13126 - polyadenylate-binding protein (PABPC) chr4 + View
Lonicera japonica Lj5C211G15 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_5_115801 Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_0_4140 K13126 - polyadenylate-binding protein (PABPC) Lsat_1_v8_lg_7 + View
Malus domestica MD05G1085100 poly(A) binding protein 8 Chr05 - View
Manihot esculenta Manes.07G073000 Chromosome07 - View
Manihot esculenta Manes.13G120600 Chromosome13 + View
Manihot esculenta Manes.10G078200 Chromosome10 + View
Manihot esculenta Manes.12G106500 Chromosome12 - View
Medicago truncatula Medtr3g102040 polyadenylate-binding protein chr3 - View
Medicago truncatula Medtr4g085540 polyadenylate-binding protein chr4 + View
Nelumbo nucifera Nn5g30361 chr5 - View
Olea europaea Oeu017482.1 chr3 + View
Petunia axillaris Peaxi162Scf00016g02127 Polyadenylate-binding protein 8 Peaxi162Scf00016 - View
Punica granatum PGR142G0697 NC_045128.1 + View
Prunus persica Prupe.8G129400 K13126 - polyadenylate-binding protein (PABPC) Pp08 - View
Pisum sativum Psat7g126640 Poly-adenylate binding protein + unique domain chr7LG7 - View
Papaver somniferum PSO675G2752 NC_039358.1 - View
Papaver somniferum PSO541G0532 NC_039363.1 - View
Papaver somniferum PSO210G5692 NC_039359.1 - View
Populus trichocarpa Potri.009G099300 PF00076//PF00658 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Poly-adenylate binding protein, unique domain (PABP) Chr09 + View
Populus trichocarpa Potri.001G304000 K13126 - polyadenylate-binding protein (PABPC) Chr01 + View
Phaseolus vulgaris Phvul.003G047500 PTHR24012:SF349 - POLYADENYLATE-BINDING PROTEIN 2-RELATED Chr03 - View
Quercus lobata QL11p034784 11 + View
Quercus lobata QL06p040606 6 + View
Rosa chinensis RcHm_v2.0_Chr6g0256591 RcHm_v2.0_Chr6 + View
Salvia bowleyana SalBow3G3529 GWHASIU00000006 - View
Salix brachista Sabra16G0190700 GWHAAZH00000016 + View
Salix brachista Sabra14G0017400 GWHAAZH00000014 + View
Salix brachista Sabra09G0075600 GWHAAZH00000009 + View
Sechium edule Sed0013120 LG13 + View
Sechium edule Sed0018598 LG05 - View
Sechium edule Sed0025100 LG10 + View
Solanum lycopersicum Solyc01g107870.3 Polyadenylate-binding protein (AHRD V3.3 *** Q9M6E6_TOBAC) SL4.0ch01 + View
Schrenkiella parvula Sp7g31820 K13126 - polyadenylate-binding protein (PABPC) ch7-5 + View
Solanum pennellii Sopen01g050030 Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins. | poly(A) binding protein 2 (PAB2) | FUNCTIONS IN: RNA binding, translation initiation factor activity | INVOLVED IN: response to salt stress, translational initiation | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 17 growth stages | CONTAINS InterPro DOMAIN/s: Polyadenylate-binding protein/Hyperplastic disc protein , RNA recognition motif, RNP-1 , Polyadenylate binding protein, human types 1, 2, 3, 4 , Paraneoplastic encephalomyelitis antigen , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: poly(A) binding protein 8 Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400025777 Poly(A)-binding protein ST4.03ch01 + View
Trochodendron aralioides TAR365G0163 group16 - View
Trochodendron aralioides TAR381G1102 group11 - View
Trochodendron aralioides TAR628G1139 group5 + View
Trochodendron aralioides TAR376G0162 group14 + View
Theobroma cacao Thecc.02G103900 Poly(A) binding protein 8 Chromosome_2 - View
Theobroma cacao Thecc.08G003300 Poly(A) binding protein 8 Chromosome_8 + View
Theobroma cacao Thecc.01G060600 Poly(A) binding protein 8 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104804379 polyadenylate-binding protein 2-like NW_010971389.1 - View
Trifolium pratense TPR.G12534 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI56G0152 NC_052242.1 + View
Tripterygium wilfordii TWI09G0355 NC_052245.1 - View
Tripterygium wilfordii TWI73G0672 NC_052232.1 + View
Tripterygium wilfordii TWI31G0758 NC_052233.1 + View
Tripterygium wilfordii TWI79G0953 NC_052238.1 + View
Tripterygium wilfordii TWI75G0570 NC_052253.1 - View
Vaccinium macrocarpon vmacro02724 Similar to PAB2: Polyadenylate-binding protein 2 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro02026 Similar to PAB8: Polyadenylate-binding protein 8 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01022079001 chr7 + View
Vitis vinifera GSVIVG01031709001 chr3 + View
Vitis vinifera GSVIVG01009455001 chr18 + View