Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0034679 PREDICTED: protein SPIRAL1-like 1 [Nicotiana sylvestris] Chr15 + View
CSS0036076 unnamed protein product [Coffea canephora] Chr1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G7000 LG-2 - View
Aethionema arabicum Aa31LG7G8700 LG-7 + View
Acer truncatum Atru.chr8.506 chr8 + View
Acer truncatum Atru.chr11.1614 chr11 - View
Acer truncatum Atru.chr9.523 chr9 - View
Actinidia chinensis Actinidia18980 Lachesis_group9 + View
Arabidopsis lyrata AL2G28320 scaffold_2 - View
Arabidopsis lyrata AL3G11430 scaffold_3 + View
Arabidopsis lyrata AL5G13470 scaffold_5 + View
Avicennia marina MSTRG.11334 ScioBoG_14204_HRSCAF_14270 - View
Avicennia marina MSTRG.7739 ScioBoG_102841_HRSCAF_103114 - View
Avicennia marina MSTRG.4487 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.13452 ScioBoG_18778_HRSCAF_18863 + View
Aquilegia oxysepala Aqoxy3G03666 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7H823S K18635 - protein SPIRAL1 and related proteins (SPR1) arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NV23DS K18635 - protein SPIRAL1 and related proteins (SPR1) arahy.Tifrunner.gnm1.Arahy.20 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YMN08X K18635 - protein SPIRAL1 and related proteins (SPR1) arahy.Tifrunner.gnm1.Arahy.10 + View
Arabidopsis thaliana AT2G03680 spiral1 The SPR1 gene encodes a plant-specific 12-kD protein which has a repeated motif at both ends%2C separated by a predicted rod-like domain%2C suggesting that it may act as an intermolecular linker. Ubiquitously expressed and belongs to a six-member gene family in Arabidopsis%3B expressed in transgenic seedlings localized to microtubules within the cortical array%2C preprophase band%2C phragmoplast%2C and mitotic spindle. SPIRAL1 (SPR1)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: anisotropic cell growth%2C unidimensional cell growth%3B LOCATED IN: spindle microtubule%2C cortical microtubule%2C transverse to long axis%2C preprophase band%2C phragmoplast%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B BEST Arabidopsis thaliana protein match is: SPIRAL1-like2 (TAIR:AT1G69230.2)%3B Has 191 Blast hits to 165 proteins in 37 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 3%3B Fungi - 6%3B Plants - 146%3B Viruses - 0%3B Other Eukaryotes - 28 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT3G02180 SPIRAL1-like3 SPIRAL1-LIKE3 belongs to a six-member gene family in Arabidopsis%3B all members share high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root%2C leaf and petal growth as a result of defective anisotropic cell expansion. SPIRAL1-like3 (SP1L3)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 14 growth stages%3B BEST Arabidopsis thaliana protein match is: SPIRAL1-like4 (TAIR:AT5G15600.1)%3B Has 418 Blast hits to 329 proteins in 68 species: Archae - 2%3B Bacteria - 13%3B Metazoa - 50%3B Fungi - 15%3B Plants - 147%3B Viruses - 0%3B Other Eukaryotes - 191 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT1G69230 SPIRAL1-like2 SPIRAL1-LIKE2 belongs to a six-member gene family in Arabidopsis%3B all members share a high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root and organ growth as a result of defective anisotropic cell expansion. SPIRAL1-like2 (SP1L2)%3B BEST Arabidopsis thaliana protein match is: SPIRAL1-like1 (TAIR:AT1G26355.1)%3B Has 157 Blast hits to 132 proteins in 28 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 143%3B Viruses - 0%3B Other Eukaryotes - 14 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G26355 SPIRAL1-like1 SPIRAL1-LIKE1 belongs to a six-member gene family in Arabidopsis%3B all members share a high sequence similarity in amino- and carboxy-terminal regions. GUS expression was detected only in pollen%3B however%2C no endogenous transcript was found. SPIRAL1-like1 (SP1L1)%3B BEST Arabidopsis thaliana protein match is: SPIRAL1-like2 (TAIR:AT1G69230.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0827G017 AmTr_v1.0_scaffold00047 - View
Brassica napus A02p15730 A02 - View
Brassica napus A06p43000 A06 - View
Brassica napus C07p34030 C07 + View
Brassica oleracea BolC7t43917H C7 + View
Brassica rapa BraA02t06634Z A02 - View
Capsicum annuum CAN.G497.94 PGAv.1.6.scaffold497 - View
Capsicum annuum CAN.G707.12 PGAv.1.6.scaffold707 - View
Capsicum annuum CAN.G1228.12 PGAv.1.6.scaffold1228 - View
Cannabis sativa CANSAT64G2561 NC_044379.1 - View
Corylus avellana Haze_14416 Similar to SP1L2: Protein SPIRAL1-like 2 (Arabidopsis thaliana OX%3D3702) 5 - View
Corylus avellana Haze_11895 Similar to SP1L2: Protein SPIRAL1-like 2 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc07_g04350 Protein SPIRAL1-like 2 chr7 + View
Citrus clementina Ciclev10022881m.g scaffold_3 + View
Citrus clementina Ciclev10033140m.g scaffold_4 - View
Ceratophyllum demersum CDE10G0200 8 - View
Ceratophyllum demersum CDE10G1178 8 - View
Cardamine hirsuta CARHR146020 spiral1 Chr5 + View
Cardamine hirsuta CARHR062110 SPIRAL1-like2 Chr2 - View
Carya illinoinensis CiPaw.04G054300 K18635 - protein SPIRAL1 and related proteins (SPR1) Chr04 - View
Carya illinoinensis CiPaw.05G124300 PTHR33403//PTHR33403:SF1 - FAMILY NOT NAMED // PROTEIN SPIRAL1 Chr05 - View
Carya illinoinensis CiPaw.03G087600 K18635 - protein SPIRAL1 and related proteins (SPR1) Chr03 - View
Cucumis melo MELO3C011417.2 Protein SPIRAL1 chr03 + View
Carica papaya Cpa.g.sc14.195 supercontig_14 + View
Carica papaya Cpa.g.sc94.73 supercontig_94 + View
Carica papaya Cpa.g.sc1.138 supercontig_1 + View
Chenopodium quinoa AUR62003088 SP1L2: Protein SPIRAL1-like 2 C_Quinoa_Scaffold_1000 - View
Chenopodium quinoa AUR62007905 SP1L2: Protein SPIRAL1-like 2 C_Quinoa_Scaffold_2646 - View
Capsella rubella Carub.0002s1582 K18635 - protein SPIRAL1 and related proteins (SPR1) scaffold_2 - View
Capsella rubella Carub.0005s0282 PTHR33403:SF1 - PROTEIN SPIRAL1 scaffold_5 + View
Capsella rubella Carub.0003s0130 PTHR33403:SF5 - PROTEIN SPIRAL1-LIKE 2-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_6G033710 protein SPIRAL1-like 1 chr6 + View
Daucus carota DCAR_025441 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_007199 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv22766 GWHABJS00000019 - View
Davidia involucrata Dinv17432 GWHABJS00000006 - View
Durio zibethinus Duzib248G1465 NW_019168048.1 + View
Durio zibethinus Duzib068G0106 NW_019167838.1 + View
Durio zibethinus Duzib251G0243 NW_019167971.1 - View
Durio zibethinus Duzib147G0005 NW_019168470.1 - View
Erigeron canadensis ECA246G3266 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA232G1206 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.B00615 Chr02 + View
Eucalyptus grandis Eucgr.B03146 Chr02 - View
Eucalyptus grandis Eucgr.J01387 Chr10 + View
Erythranthe guttata Migut.D01627 scaffold_4 - View
Erythranthe guttata Migut.L01180 scaffold_12 - View
Eutrema salsugineum Thhalv10019332m.g K18635 - protein SPIRAL1 and related proteins (SPR1) scaffold_9 + View
Eutrema salsugineum Thhalv10005140m.g PTHR33403:SF1 - PROTEIN SPIRAL1 scaffold_6 - View
Fragaria x ananassa FAN08G1795 K18635 - protein SPIRAL1 and related proteins (SPR1) Fvb5-3 + View
Fragaria x ananassa FAN18G3701 K18635 - protein SPIRAL1 and related proteins (SPR1) Fvb5-1 - View
Fragaria x ananassa FAN13G2963 K18635 - protein SPIRAL1 and related proteins (SPR1) Fvb5-2 - View
Fragaria x ananassa FAN14G1055 K18635 - protein SPIRAL1 and related proteins (SPR1) Fvb6-1 + View
Fragaria x ananassa FAN12G3040 Fvb4-3 + View
Fragaria x ananassa FAN22G2227 K18635 - protein SPIRAL1 and related proteins (SPR1) Fvb4-1 - View
Fragaria x ananassa FAN05G5300 K18635 - protein SPIRAL1 and related proteins (SPR1) Fvb6-3 + View
Fragaria x ananassa FAN09G0624 Fvb6-2 + View
Fragaria vesca FvH4_6g46690 K18635 - protein SPIRAL1 and related proteins (SPR1) Fvb6 - View
Fragaria vesca FvH4_4g29840 K18635 - protein SPIRAL1 and related proteins (SPR1) Fvb4 - View
Fragaria vesca FvH4_5g13660 K18635 - protein SPIRAL1 and related proteins (SPR1) Fvb5 - View
Gossypium hirsutum Gohir.A07G067600 K18635 - protein SPIRAL1 and related proteins (SPR1) A07 - View
Gossypium hirsutum Gohir.D03G097200 K18635 - protein SPIRAL1 and related proteins (SPR1) D03 + View
Gossypium hirsutum Gohir.A03G070800 K18635 - protein SPIRAL1 and related proteins (SPR1) A03 + View
Gossypium hirsutum Gohir.D13G083000 K18635 - protein SPIRAL1 and related proteins (SPR1) D13 + View
Gossypium hirsutum Gohir.A13G083100 K18635 - protein SPIRAL1 and related proteins (SPR1) A13 - View
Gossypium hirsutum Gohir.D07G072200 K18635 - protein SPIRAL1 and related proteins (SPR1) D07 - View
Gossypium hirsutum Gohir.D02G129800 K18635 - protein SPIRAL1 and related proteins (SPR1) D02 + View
Glycine max Glyma.02G119200 PTHR33403:SF5 - PROTEIN SPIRAL1-LIKE 2-RELATED Gm02 + View
Glycine max Glyma.19G032000 K18635 - protein SPIRAL1 and related proteins (SPR1) Gm19 + View
Glycine max Glyma.13G055400 K18635 - protein SPIRAL1 and related proteins (SPR1) Gm13 - View
Glycine max Glyma.01G060900 PTHR33403:SF5 - PROTEIN SPIRAL1-LIKE 2-RELATED Gm01 + View
Gossypium raimondii Gorai.005G145800 Chr05 + View
Gossypium raimondii Gorai.001G076400 Chr01 - View
Gossypium raimondii Gorai.003G102000 Chr03 + View
Gossypium raimondii Gorai.013G094900 Chr13 + View
Helianthus annuus HanXRQChr09g0270381 Uncharacterized protein, conserved in plant genome(s), supported by expression data HanXRQChr09 - View
Hydrangea macrophylla Hma1.2p1_0322F.1_g124610 Hma1.2p1_0322F.1 - View
Lupinus albus Lalb_Chr17g0341261 Lalb_Chr17 + View
Lupinus albus Lalb_Chr04g0255611 K18635 - protein SPIRAL1 and related proteins (SPR1) Lalb_Chr04 - View
Lotus japonicus Lj2g0003657 K18635 - protein SPIRAL1 and related proteins (SPR1) chr2 + View
Lotus japonicus Lj2g0027667 K18635 - protein SPIRAL1 and related proteins (SPR1) chr2 - View
Lonicera japonica Lj4A120T26 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_4_172200 Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_4_110720 Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_5_23001 Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_3_53761 Lsat_1_v8_lg_3 + View
Magnolia biondii MBI16_g10847_MAGBIO AED:0.02 Chr16 - View
Malus domestica MD06G1203200 SPIRAL1-like1 Chr06 + View
Malus domestica MD14G1213800 SPIRAL1-like1 Chr14 + View
Malus domestica MD16G1059900 SPIRAL1-like1 Chr16 - View
Malus domestica MD17G1061700 SPIRAL1-like2 Chr17 + View
Malus domestica MD09G1068700 SPIRAL1-like2 Chr09 + View
Malus domestica MD13G1060700 SPIRAL1-like1 Chr13 - View
Manihot esculenta Manes.05G109500 Chromosome05 + View
Manihot esculenta Manes.14G086900 Chromosome14 + View
Manihot esculenta Manes.02G056400 Chromosome02 + View
Manihot esculenta Manes.06G082900 Chromosome06 - View
Manihot esculenta Manes.01G026900 Chromosome01 - View
Nelumbo nucifera Nn3g17479 chr3 + View
Nelumbo nucifera Nn4g23461 chr4 + View
Nicotiana tabacum Nitab4.5_0007160g0060 Unknown Nitab4.5_0007160 - View
Nicotiana tabacum Nitab4.5_0001485g0070 Unknown Nitab4.5_0001485 - View
Olea europaea Oeu048136.1 chr12 + View
Olea europaea Oeu014421.1 chr10 - View
Oryza sativa ssp. japonica Os03g0417800 Similar to Nap16kDa protein. Nitrilase associated protein-like. chr03 - View
Petunia axillaris Peaxi162Scf00175g00418 SPIRAL1-like1 Peaxi162Scf00175 + View
Petunia axillaris Peaxi162Scf00201g00332 Unknown protein Peaxi162Scf00201 + View
Punica granatum PGR102G0948 NC_045129.1 + View
Punica granatum PGR083G0489 NC_045133.1 + View
Prunus persica Prupe.3G252100 K18635 - protein SPIRAL1 and related proteins (SPR1) Pp03 - View
Prunus persica Prupe.5G206800 PTHR33403:SF1 - PROTEIN SPIRAL1 Pp05 + View
Prunus persica Prupe.1G288700 K18635 - protein SPIRAL1 and related proteins (SPR1) Pp01 + View
Papaver somniferum PSO478G1062 NC_039361.1 - View
Papaver somniferum PSO017G7332 NC_039362.1 + View
Papaver somniferum PSO017G3816 NC_039362.1 - View
Populus trichocarpa Potri.008G097000 K18635 - protein SPIRAL1 and related proteins (SPR1) Chr08 + View
Populus trichocarpa Potri.015G059100 PTHR33403:SF1 - PROTEIN SPIRAL1 Chr15 + View
Populus trichocarpa Potri.017G095200 K18635 - protein SPIRAL1 and related proteins (SPR1) Chr17 + View
Populus trichocarpa Potri.010G157600 K18635 - protein SPIRAL1 and related proteins (SPR1) Chr10 - View
Phaseolus vulgaris Phvul.003G041500 K18635 - protein SPIRAL1 and related proteins (SPR1) Chr03 - View
Phaseolus vulgaris Phvul.004G038000 K18635 - protein SPIRAL1 and related proteins (SPR1) Chr04 + View
Quercus lobata QL03p073924 3 - View
Quercus lobata QL02p067333 CM012294 - View
Quercus lobata QL10p019943 10 + View
Rosa chinensis RcHm_v2.0_Chr2g0165561 RcHm_v2.0_Chr2 - View
Rosa chinensis RcHm_v2.0_Chr7g0183301 RcHm_v2.0_Chr7 + View
Rosa chinensis RcHm_v2.0_Chr4g0438091 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim08G0075700 chr08 + View
Rhododendron simsii Rhsim12G0074400 chr12 - View
Rhododendron simsii Rhsim09G0126400 chr09 - View
Striga asiatica SGA_v2.0_scaffold16G07802 scaffold16 + View
Striga asiatica SGA_v2.0_scaffold25G10946 scaffold25 + View
Salix brachista Sabra15G0084800 GWHAAZH00000015 + View
Salix brachista Sabra10G0119500 GWHAAZH00000010 - View
Salix brachista Sabra17G0084400 GWHAAZH00000017 + View
Simmondsia chinensis Sc04g0004470 GWHAASQ00000004 + View
Solanum lycopersicum Solyc05g012160.3 Protein SPIRAL1-like 2 (AHRD V3.3 *** A0A2G2YD05_CAPAN) SL4.0ch05 - View
Solanum lycopersicum Solyc02g089065.1 Protein SPIRAL1 (AHRD V3.3 *** A0A1U8FPZ4_CAPAN) SL4.0ch02 + View
Solanum lycopersicum Solyc03g114970.3 Protein SPIRAL1 (AHRD V3.3 *** A0A2G3A261_CAPAN) SL4.0ch03 - View
Schrenkiella parvula Sp1g22340 PTHR33403//PTHR33403:SF1 - FAMILY NOT NAMED // PROTEIN SPIRAL1 ch1-1 + View
Schrenkiella parvula Sp5g24280 PTHR33403:SF1 - PROTEIN SPIRAL1 ch5-6 - View
Schrenkiella parvula Sp2g14500 PTHR33403//PTHR33403:SF1 - FAMILY NOT NAMED // PROTEIN SPIRAL1 ch2-4 + View
Solanum pennellii Sopen03g034050 SPIRAL1-LIKE1 belongs to a six-member gene family in Arabidopsis | all members share a high sequence similarity in amino- and carboxy-terminal regions. GUS expression was detected only in pollen | however, no endogenous transcript was found. | SPIRAL1-like1 (SP1L1) | BEST Arabidopsis thaliana protein match is: SPIRAL1-like2 Spenn-ch03 - View
Solanum pennellii Sopen05g006950 hypothetical protein Spenn-ch05 - View
Solanum pennellii Sopen02g033820 SPIRAL1-LIKE1 belongs to a six-member gene family in Arabidopsis | all members share a high sequence similarity in amino- and carboxy-terminal regions. GUS expression was detected only in pollen | however, no endogenous transcript was found. | SPIRAL1-like1 (SP1L1) | BEST Arabidopsis thaliana protein match is: SPIRAL1-like2 Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400024631 SP1L ST4.03ch03 - View
Solanum tuberosum PGSC0003DMG400001364 SP1L ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400028366 SP1L ST4.03ch05 + View
Selenicereus undatus Hund05833 Scaffold_19641 - View
Selenicereus undatus Hund09934 Scaffold_10417 + View
Selenicereus undatus Hund25169 Scaffold_3410 - View
Trochodendron aralioides TAR622G0843 group8 - View
Trochodendron aralioides TAR629G1017 group0 - View
Theobroma cacao Thecc.04G097800 Chromosome_4 + View
Theobroma cacao Thecc.03G104400 SPIRAL1-like1 Chromosome_3 + View
Theobroma cacao Thecc.02G328900 T1K7.26 protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104820990 protein SPIRAL1-like 2 NW_010966372.1 - View
Tarenaya hassleriana THA.LOC104822004 protein SPIRAL1-like 2 NW_010966617.1 - View
Tarenaya hassleriana THA.LOC104824055 protein SPIRAL1-like 1 NW_010966881.1 - View
Tarenaya hassleriana THA.LOC104801825 protein SPIRAL1 NW_010970030.1 + View
Trifolium pratense TPR.G24467 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI32G1136 NC_052254.1 + View
Tripterygium wilfordii TWI31G0776 NC_052233.1 - View
Tripterygium wilfordii TWI34G0200 NC_052235.1 - View
Vaccinium macrocarpon vmacro18141 Similar to SP1L2: Protein SPIRAL1-like 2 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vanilla planifolia HPP92_006047 Protein SPIRAL1-like 1 *** CM028151.1 - View
Vitis vinifera GSVIVG01012230001 chr1 - View
Vitis vinifera GSVIVG01008116001 chr17 - View
Vitis vinifera GSVIVG01032901001 chr14 - View
Zea mays Zm00001eb020110 Zm00001e002001 Protein SPIRAL1 1 - View