Gene: AT2G03680
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G03680
- Transcript Identifier AT2G03680.1
- Gene Type Coding gene
- Location Chr2 : 1121398-1121850 : positive
Gene Family Information
- ID HOM05D001316
- #Genes/#Species 477/97
- Phylogenetic origin
- ID ORTHO05D001113
- #Genes/#Species 481/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G03680.1
- symbol SPR1
- Alias SKU6
- full_name SPIRAL1
- uniprot Q9SJW3
Descriptions
- Description spiral1
- Computational description SPIRAL1 (SPR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anisotropic cell growth, unidimensional cell growth; LOCATED IN: spindle microtubule, cortical microtubule, transverse to long axis, preprophase band, phragmoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: SPIRAL1-like2 (TAIR:AT1G69230.2); Has 191 Blast hits to 165 proteins in 37 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 6; Plants - 146; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043622 | IEA | GOA Database | cortical microtubule organization | |
| GO:0043622 | IGI IBA | Gene Ontology | cortical microtubule organization | 1 2 |
| GO:0043622 | IEA | InterPro | cortical microtubule organization | |
| GO:0071472 | IGI | Gene Ontology | cellular response to salt stress | 2 |
| GO:0051211 | IMP | Gene Ontology | anisotropic cell growth | 3 |
| GO:0009826 | IMP | Gene Ontology | unidimensional cell growth | 4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | HDA | Gene Ontology | cytosol | 5 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005874 | IEA | GOA Database | microtubule | |
| GO:0005856 | IEA | GOA Database | cytoskeleton | |
| GO:0005819 | IEA | GOA Database | spindle | |
| GO:0009524 | IEA | GOA Database | phragmoplast | |
| GO:0009524 | IDA | Gene Ontology | phragmoplast | 3 |
| GO:0010005 | IDA IBA | Gene Ontology | cortical microtubule, transverse to long axis | 1 3 |
| GO:0005739 | HDA | Gene Ontology | mitochondrion | 6 |
| GO:0009574 | IDA | Gene Ontology | preprophase band | 3 |
| GO:0005876 | IDA | Gene Ontology | spindle microtubule | 3 |
| GO:0055028 | IDA | Gene Ontology | cortical microtubule | 7 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039613 | Protein SPIRAL1-like |
| Mapman id | Description |
|---|---|
| 20.1.5.1.3 | Cytoskeleton organisation.microtubular network.microtubule dynamics.microtubule (MT) plus-end-tracking.MT plus-end-tracking protein (SPR1) |