Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0047098 unnamed protein product [Coffea canephora] Contig928 + View
CSS0018198 PREDICTED: intracellular protein transport protein USO1-like [Nicotiana sylvestris] Chr12 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G340 LG-9 - View
Acer truncatum Atru.chr9.2042 chr9 - View
Actinidia chinensis Actinidia27335 Lachesis_group14 + View
Actinidia chinensis Actinidia22719 Lachesis_group20 + View
Actinidia chinensis Actinidia04211 Lachesis_group6 - View
Actinidia chinensis Actinidia01396 Lachesis_group23 - View
Arabidopsis lyrata AL2G10610 scaffold_2 - View
Arabidopsis lyrata AL7G47470 scaffold_7 - View
Avicennia marina MSTRG.11936 ScioBoG_17730_HRSCAF_17811 - View
Avicennia marina MSTRG.1816 ScioBoG_102834_HRSCAF_103055 - View
Avicennia marina MSTRG.25657 ScioBoG_4119_HRSCAF_4138 + View
Amaranthus hybridus Ah.12g052300 COP1-interactive protein 1 AmaHy_arrow1_Scaffold_12 + View
Amaranthus hybridus Ah.07g197190 AmaHy_arrow1_Scaffold_7 + View
Aquilegia oxysepala Aqoxy5G04152 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P7UIV5 PTHR32258:SF4 - KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q3GPI2 PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DN0YA4 PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F3VNHJ PTHR32258:SF4 - KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT5G41780 myosin heavy chain-like protein myosin heavy chain-related%3B BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64320.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT1G64320 myosin heavy chain-like protein myosin heavy chain-related%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: response to cadmium ion%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: male gametophyte%2C flower%2C cultured cell%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%3B BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G41780.1)%3B Has 120676 Blast hits to 61544 proteins in 2785 species: Archae - 1971%3B Bacteria - 17622%3B Metazoa - 55572%3B Fungi - 10250%3B Plants - 6487%3B Viruses - 441%3B Other Eukaryotes - 28333 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB07g31454 ChrB07 + View
Brassica carinata BcaB06g27672 ChrB06 + View
Brassica carinata BcaC02g08917 ChrC02 - View
Brassica carinata BcaC08g44555 ChrC08 + View
Brassica carinata BcaC04g22558 ChrC04 + View
Brassica napus C09p17910 C09 - View
Brassica napus A09p14790 A09 - View
Brassica napus A04p14960 A04 + View
Brassica napus C06p20200 C06 + View
Brassica oleracea BolC9t54688H C9 - View
Brassica oleracea BolC6t37201H C6 + View
Brassica rapa BraA09t37126Z A09 - View
Brassica rapa BraA04t17139Z A04 + View
Beta vulgaris EL10Ac5g12883 PTHR13140//PTHR13140:SF470 - MYOSIN // SUBFAMILY NOT NAMED Chr5_EL10_PGA_scaffold2 + View
Capsicum annuum CAN.G532.94 PGAv.1.6.scaffold532 + View
Cannabis sativa CANSAT21G0822 NC_044374.1 + View
Cicer arietinum L. Ca_24520_v3 Ca_LG8_v3 - View
Cicer arietinum L. Ca_17494_v3 Ca_LG6_v3 - View
Corylus avellana Haze_08667 Similar to CIP1: COP1-interactive protein 1 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc08_g15770 Putative myosin heavy chain-related chr8 + View
Citrus clementina Ciclev10018618m.g scaffold_3 - View
Ceratophyllum demersum CDE10G1355 8 - View
Cardamine hirsuta CARHR046630 myosin heavy chain-related Chr2 - View
Carya illinoinensis CiPaw.11G123900 PTHR13140//PTHR13140:SF470 - MYOSIN // SUBFAMILY NOT NAMED Chr11 - View
Carya illinoinensis CiPaw.12G085000 PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMED Chr12 - View
Citrullus lanatus ClCG07G014890 Myosin-11 CG_Chr07 + View
Cucumis melo MELO3C016308.2 myosin-11-like chr07 - View
Chenopodium quinoa AUR62019807 Protein of unknown function C_Quinoa_Scaffold_1480 + View
Chenopodium quinoa AUR62010808 Protein of unknown function C_Quinoa_Scaffold_1280 + View
Capsella rubella Carub.0002s0048 PTHR32258:SF4 - KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN scaffold_2 - View
Capsella rubella Carub.0007s3359 PTHR13140:SF433 - COP1-INTERACTIVE PROTEIN 1 scaffold_7 - View
Cucumis sativus L. CsaV3_4G006410 golgin subfamily A member 6-like protein 22 chr4 + View
Daucus carota DCAR_005027 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv37550 GWHABJS00000017 - View
Davidia involucrata Dinv38857 GWHABJS00000003 - View
Durio zibethinus Duzib068G0910 NW_019167838.1 + View
Durio zibethinus Duzib205G1563 NW_019168381.1 + View
Durio zibethinus Duzib084G0477 NW_019167827.1 + View
Erigeron canadensis ECA233G6022 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA240G2507 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA246G1519 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.E00844 Chr05 + View
Erythranthe guttata Migut.A00678 scaffold_1 - View
Erythranthe guttata Migut.E01235 scaffold_5 + View
Eutrema salsugineum Thhalv10027620m.g PTHR13140:SF433 - COP1-INTERACTIVE PROTEIN 1 scaffold_14 - View
Eutrema salsugineum Thhalv10023387m.g PTHR32258:SF4 - KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN scaffold_8 - View
Fragaria x ananassa FAN04G1467 PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Fvb5-4 - View
Fragaria x ananassa FAN13G0971 KOG0018//KOG0962//KOG0971//KOG0978//KOG4674 - Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) // DNA repair protein RAD50, ABC-type ATPase/SMC superfamily // Microtubule-associated protein dynactin DCTN1/Glued // E3 ubiquitin ligase involved in syntaxin degradation // Uncharacterized conserved coiled-coil protein Fvb5-2 + View
Fragaria x ananassa FAN18G3989 PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Fvb5-1 - View
Fragaria x ananassa FAN08G2643 KOG0018//KOG4674 - Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) // Uncharacterized conserved coiled-coil protein Fvb5-3 - View
Fragaria vesca FvH4_5g04071 PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Fvb5 + View
Gossypium hirsutum Gohir.D03G081800 PF07765 - KIP1-like protein (KIP1) D03 + View
Gossypium hirsutum Gohir.A08G099784 PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED A08 + View
Gossypium hirsutum Gohir.D08G132401 PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED D08 - View
Glycine max Glyma.05G215000 PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Gm05 + View
Glycine max Glyma.08G021300 PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Gm08 + View
Gossypium raimondii Gorai.004G135300 Chr04 - View
Helianthus annuus HanXRQChr17g0535111 Uncharacterized protein, conserved in plant genome(s), supported by expression data HanXRQChr17 + View
Hydrangea macrophylla Hma1.2p1_0952F.1_g240920 Hma1.2p1_0952F.1 + View
Lupinus albus Lalb_Chr09g0332631 PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMED Lalb_Chr09 - View
Lupinus albus Lalb_Chr16g0390551 PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMED Lalb_Chr16 + View
Lupinus albus Lalb_Chr05g0224241 KOG0962//KOG4674 - DNA repair protein RAD50, ABC-type ATPase/SMC superfamily // Uncharacterized conserved coiled-coil protein Lalb_Chr05 - View
Lotus japonicus Lj4g0008940 PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMED chr4 - View
Lotus japonicus LjContig00312_ERROPOS870357g0010036 PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Contig00312_ERROPOS870357 - View
Lonicera japonica Lj8P210T83 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_6_12040 PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Lsat_1_v8_lg_6 + View
Lactuca sativa Lsat_1_v5_gn_6_85821 Lsat_1_v8_lg_6 - View
Malus domestica MD06G1102200 myosin heavy chain-related Chr06 + View
Malus domestica MD14G1121400 myosin heavy chain-related Chr14 + View
Manihot esculenta Manes.01G046000 Chromosome01 + View
Manihot esculenta Manes.02G012600 Chromosome02 - View
Medicago truncatula Medtr8g099265 myosin heavy chain-like protein chr8 + View
Nicotiana tabacum Nitab4.5_0002944g0210 Unknown Nitab4.5_0002944 - View
Nicotiana tabacum Nitab4.5_0000223g0210 Unknown Nitab4.5_0000223 + View
Nicotiana tabacum Nitab4.5_0004161g0030 Unknown Nitab4.5_0004161 - View
Olea europaea Oeu009945.1 scaffold138 + View
Olea europaea Oeu042385.1 chr13 + View
Petunia axillaris Peaxi162Scf00074g01134 COP1-interactive protein 1 Peaxi162Scf00074 - View
Petunia axillaris Peaxi162Scf00117g00131 Coiled-coil domain-containing protein, putative Peaxi162Scf00117 - View
Petunia axillaris Peaxi162Scf00102g00176 Coiled-coil domain-containing-like protein Peaxi162Scf00102 + View
Punica granatum PGR042G1587 NC_045130.1 - View
Prunus persica Prupe.5G115200 Pp05 + View
Pisum sativum Psat7g027480 KIP1-like protein chr7LG7 + View
Populus trichocarpa Potri.003G137300 PTHR18937//PTHR18937:SF216 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Chr03 + View
Populus trichocarpa Potri.001G094200 PTHR13140//PTHR13140:SF418 - MYOSIN // SUBFAMILY NOT NAMED Chr01 - View
Phaseolus vulgaris Phvul.002G163000 PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Chr02 + View
Phaseolus vulgaris Phvul.002G296200 PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Chr02 + View
Quercus lobata QL02p031434 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr7g0195431 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim07G0084000 chr07 - View
Rhododendron simsii Rhsim02G0241100 chr02 + View
Striga asiatica SGA_v2.0_scaffold173G39089 scaffold173 - View
Striga asiatica SGA_v2.0_scaffold96G28980 scaffold96 - View
Striga asiatica SGA_v2.0_scaffold111G31429 scaffold111 - View
Salix brachista Sabra01G0070100 GWHAAZH00000001 - View
Salix brachista Sabra03G0098800 GWHAAZH00000003 + View
Simmondsia chinensis Sc01g0010120 GWHAASQ00000001 + View
Simmondsia chinensis Sc07g0009950 GWHAASQ00000007 + View
Sechium edule Sed0025225 LG13 - View
Sechium edule Sed0022097 LG07 - View
Sapria himalayana SHI07008 scaffold4_21100006 - View
Solanum lycopersicum Solyc08g082010.3 Myosin heavy chain-related protein (AHRD V3.3 *-* A0A2U1NUP5_ARTAN) SL4.0ch08 + View
Solanum lycopersicum Solyc08g008260.2 myosin heavy chain-like protein (AHRD V3.3 *-* AT5G41780.4) SL4.0ch08 + View
Schrenkiella parvula Sp7g00300 PTHR13140//PTHR13140:SF433 - MYOSIN // COP1-INTERACTIVE PROTEIN 1 ch7-1 - View
Schrenkiella parvula Sp2g00430 PF07765 - KIP1-like protein (KIP1) ch2-1 - View
Solanum pennellii Sopen08g004110 encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light. | COP1-interactive protein 1 (CIP1) | FUNCTIONS IN: protein binding | INVOLVED IN: regulation of protein import into nucleus | LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Prefoldin | BEST Arabidopsis thaliana protein match is: myosin heavy chain-related Spenn-ch08 + View
Solanum pennellii Sopen12g028580 encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light. | COP1-interactive protein 1 (CIP1) | FUNCTIONS IN: protein binding | INVOLVED IN: regulation of protein import into nucleus | LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Prefoldin | BEST Arabidopsis thaliana protein match is: myosin heavy chain-related Spenn-ch12 - View
Solanum pennellii Sopen08g030310 encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light. | COP1-interactive protein 1 (CIP1) | FUNCTIONS IN: protein binding | INVOLVED IN: regulation of protein import into nucleus | LOCATED IN: cytoskeleton, plasma membrane, chloroplast, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Prefoldin | BEST Arabidopsis thaliana protein match is: myosin heavy chain-related Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400005787 Coiled-coil domain-containing protein ST4.03ch08 + View
Solanum tuberosum PGSC0003DMG400012303 Centromeric protein E ST4.03ch08 + View
Selenicereus undatus Hund11405 Scaffold_10417 - View
Trochodendron aralioides TAR374G0929 group12 + View
Theobroma cacao Thecc.03G293100 Coiled-coil domain-containing Chromosome_3 + View
Tarenaya hassleriana THA.LOC104809341 centromere-associated protein E isoform X1 NW_010965019.1 - View
Trifolium pratense TPR.G6696 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI15G0725 NC_052247.1 - View
Tripterygium wilfordii TWI60G1278 NC_052246.1 + View
Vaccinium macrocarpon vmacro13912 Similar to CIP1: COP1-interactive protein 1 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G3208 CM024074.1 - View
Vigna mungo VMungo0251G1783 CM024069.1 + View
Vitis vinifera GSVIVG01019499001 chr2 + View