Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0011472 PREDICTED: probable pectate lyase 15-like [Fragaria vesca subsp. vesca] Chr9 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G18790 LG-1 + View
Acer truncatum Atru.chr6.2461 chr6 - View
Acer truncatum Atru.chr11.2194 chr11 - View
Acer truncatum Atru.chr9.983 chr9 - View
Actinidia chinensis Actinidia36771 Lachesis_group9 + View
Actinidia chinensis Actinidia16205 Lachesis_group13 + View
Actinidia chinensis Actinidia08847 Lachesis_group2 + View
Actinidia chinensis Actinidia19372 Lachesis_group1 + View
Arabidopsis lyrata AL8G40270 scaffold_8 - View
Avicennia marina MSTRG.23186 ScioBoG_3703_HRSCAF_3719 - View
Amaranthus hybridus Ah.08g218370 Probable pectate lyase 18 (EC 4.2.2.2) (Pectate lyase A10) AmaHy_arrow1_Scaffold_8 + View
Amaranthus hybridus Ah.08g211500 AmaHy_arrow1_Scaffold_8 + View
Aquilegia oxysepala Aqoxy5G03625_Aqoxy5G03626 CHR05 + View
Aquilegia oxysepala Aqoxy3G01359 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.606BFT PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.65LEM9 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CWZU13 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.71G8UT PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT5G63180 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C AmbAllergen (InterPro:IPR018082)%2C Pectate lyase/Amb allergen (InterPro:IPR002022)%2C Pectin lyase fold (InterPro:IPR012334)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G24780.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC01g02564 ChrC01 - View
Brassica napus A06p29910 A06 - View
Brassica napus C03p63450 C03 + View
Brassica napus A09p08160 A09 - View
Brassica oleracea BolC9t53835H C9 - View
Brassica oleracea BolC3t18597H C3 + View
Brassica rapa BraA06t25942Z A06 - View
Brassica rapa BraA09t36467Z A09 - View
Beta vulgaris EL10Ac7g18041 PTHR31683:SF28 - PECTATE LYASE 22-RELATED Chr7_EL10_PGA_scaffold5 - View
Capsicum annuum CAN.G472.53 PGAv.1.6.scaffold472 + View
Cannabis sativa CANSAT80G0892 NC_044372.1 + View
Cicer arietinum L. Ca_16104_v3 Ca_LG5_v3 - View
Corylus avellana Haze_12300 Similar to At1g67750: Probable pectate lyase 5 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc07_g00190 Pectate lyase chr7 - View
Coffea canephora Cc04_g10740 Probable pectate lyase 22 chr4 + View
Citrus clementina Ciclev10031429m.g scaffold_4 + View
Citrus clementina Ciclev10020423m.g scaffold_3 - View
Ceratophyllum demersum CDE09G0557 7 - View
Carpinus fangiana Cfa009266 Cfa03 - View
Cardamine hirsuta CARHR277030 Pectate lyase Chr8 - View
Carya illinoinensis CiPaw.11G013700 PTHR31683:SF28 - PECTATE LYASE 22-RELATED Chr11 + View
Carya illinoinensis CiPaw.12G033900 PTHR31683:SF28 - PECTATE LYASE 22-RELATED Chr12 - View
Carya illinoinensis CiPaw.03G048000 PTHR31683:SF29 - PECTATE LYASE 11-RELATED Chr03 - View
Citrullus lanatus ClCG03G003320 Pectate lyase CG_Chr03 - View
Citrullus lanatus ClCG08G017530 Pectate lyase CG_Chr08 + View
Cucumis melo MELO3C002319.2 Pectate lyase chr12 + View
Cucumis melo MELO3C010706.2 Pectate lyase chr03 + View
Carica papaya Cpa.g.sc4.36 supercontig_4 - View
Chenopodium quinoa AUR62001254 At4g24780: Probable pectate lyase 18 C_Quinoa_Scaffold_2716 - View
Chenopodium quinoa AUR62005530 At1g67750: Probable pectate lyase 5 C_Quinoa_Scaffold_1214 - View
Chenopodium quinoa AUR62025754 At4g24780: Probable pectate lyase 18 C_Quinoa_Scaffold_1677 + View
Cucumis sativus L. CsaV3_2G025090 Pectate lyase chr2 - View
Cucumis sativus L. CsaV3_1G009130 Pectate lyase chr1 - View
Daucus carota DCAR_007463 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_016430 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_026200 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv25711 GWHABJS00000012 - View
Davidia involucrata Dinv33402 GWHABJS00000014 + View
Davidia involucrata Dinv11123 GWHABJS00000006 - View
Davidia involucrata Dinv38492 GWHABJS00000019 - View
Durio zibethinus Duzib264G1195 NW_019167960.1 + View
Durio zibethinus Duzib068G0344 NW_019167838.1 + View
Durio zibethinus Duzib205G0491 NW_019168381.1 + View
Durio zibethinus Duzib251G0176 NW_019167971.1 - View
Durio zibethinus Duzib147G0436 NW_019168470.1 - View
Durio zibethinus Duzib084G0886 NW_019167827.1 + View
Durio zibethinus Duzib187G1595 NW_019167860.1 + View
Durio zibethinus Duzib268G1465 NW_019168270.1 - View
Erigeron canadensis ECA246G3666 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.B00168 Chr02 + View
Erythranthe guttata Migut.O00218 scaffold_17 - View
Fragaria x ananassa FAN05G0204 PTHR31683:SF29 - PECTATE LYASE 11-RELATED Fvb6-3 + View
Fragaria x ananassa FAN17G0788 PTHR31683//PTHR31683:SF26 - FAMILY NOT NAMED // PECTATE LYASE 5-RELATED Fvb4-2 - View
Fragaria x ananassa FAN04G0863 PTHR31683:SF28 - PECTATE LYASE 22-RELATED Fvb5-4 + View
Fragaria x ananassa FAN13G2396 PTHR31683:SF28 - PECTATE LYASE 22-RELATED Fvb5-2 + View
Fragaria vesca FvH4_5g06720 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED Fvb5 + View
Gossypium hirsutum Gohir.D03G102800 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED D03 + View
Gossypium hirsutum Gohir.D13G068100 4.2.2.2 - Pectate lyase / PPase-N D13 - View
Gossypium hirsutum Gohir.D07G059000 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED D07 - View
Gossypium hirsutum Gohir.A07G054700 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED A07 - View
Gossypium hirsutum Gohir.D12G190100 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED D12 + View
Glycine max Glyma.18G012200 PTHR31683//PTHR31683:SF26 - FAMILY NOT NAMED // PECTATE LYASE 5-RELATED Gm18 + View
Glycine max Glyma.17G126500 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED Gm17 - View
Glycine max Glyma.05G044000 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED Gm05 - View
Glycine max Glyma.06G174700 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED Gm06 + View
Glycine max Glyma.11G244800 PTHR31683//PTHR31683:SF26 - FAMILY NOT NAMED // PECTATE LYASE 5-RELATED Gm11 - View
Glycine max Glyma.04G191100 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED Gm04 - View
Gossypium raimondii Gorai.003G108300 Chr03 + View
Gossypium raimondii Gorai.001G062400 Chr01 - View
Gossypium raimondii Gorai.002G246200 Chr02 + View
Hydrangea macrophylla Hma1.2p1_0046F.1_g027500 Hma1.2p1_0046F.1 - View
Lupinus albus Lalb_Chr12g0202041 PTHR31683:SF28 - PECTATE LYASE 22-RELATED Lalb_Chr12 - View
Lupinus albus Lalb_Chr07g0183181 PTHR31683:SF28 - PECTATE LYASE 22-RELATED Lalb_Chr07 - View
Lotus japonicus Lj4g0000076 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED chr4 - View
Lotus japonicus Lj1g0016163 PTHR31683:SF28 - PECTATE LYASE 22-RELATED chr1 + View
Lonicera japonica Lj9A472T91 GWHAAZE00000009 - View
Lonicera japonica Lju41A44T89 GWHAAZE00000094 - View
Lonicera japonica Lj5C101T7 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_5_12880 PTHR31683:SF28 - PECTATE LYASE 22-RELATED Lsat_1_v8_lg_5 - View
Malus domestica MD06G1161400 Pectin lyase-like superfamily protein Chr06 - View
Malus domestica MD16G1106400 Pectate lyase family protein Chr16 - View
Malus domestica MD14G1167100 Pectin lyase-like superfamily protein Chr14 - View
Malus domestica MD13G1106200 Pectate lyase family protein Chr13 - View
Manihot esculenta Manes.06G113200 Chromosome06 - View
Manihot esculenta Manes.13G019500 Chromosome13 + View
Manihot esculenta Manes.14G056400 Chromosome14 + View
Manihot esculenta Manes.15G154200 Chromosome15 - View
Manihot esculenta Manes.12G019100 Chromosome12 + View
Medicago truncatula Medtr4g104320 pectate lyase family protein chr4 + View
Medicago truncatula Medtr3g075320 pectate lyase family protein chr3 - View
Medicago truncatula Medtr3g086310 pectate lyase family protein chr3 + View
Nelumbo nucifera Nn3g16622 chr3 + View
Nelumbo nucifera Nn3g19890 chr3 - View
Nicotiana tabacum Nitab4.5_0001360g0220 Pectate lyase/Amb allergen, Pectin lyase fold, AmbAllergen, Pectin lyase fold/virulence factor Nitab4.5_0001360 + View
Olea europaea Oeu045490.1 chr1 + View
Olea europaea Oeu023467.1 chr12 - View
Petunia axillaris Peaxi162Scf00420g00140 Pectin lyase-like superfamily protein Peaxi162Scf00420 - View
Petunia axillaris Peaxi162Scf00089g01019 Pectate lyase family protein Peaxi162Scf00089 + View
Petunia axillaris Peaxi162Scf00128g00642 Pectin lyase-like superfamily protein Peaxi162Scf00128 - View
Petunia axillaris Peaxi162Scf00763g00412 Pectate lyase family protein Peaxi162Scf00763 + View
Punica granatum PGR044G0976 NC_045134.1 - View
Punica granatum PGR083G1637 NC_045133.1 + View
Pisum sativum Psat5g140520 Pollen allergen Amb family signature chr5LG3 - View
Papaver somniferum PSO782G3480 NC_039365.1 + View
Populus trichocarpa Potri.012G091500 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED Chr12 - View
Populus trichocarpa Potri.010G051800 PTHR31683//PTHR31683:SF26 - FAMILY NOT NAMED // PECTATE LYASE 5-RELATED Chr10 - View
Populus trichocarpa Potri.015G087800 PTHR31683//PTHR31683:SF28 - FAMILY NOT NAMED // PECTATE LYASE 22-RELATED Chr15 - View
Phaseolus vulgaris Phvul.003G207400 PTHR31683:SF28 - PECTATE LYASE 22-RELATED Chr03 - View
Phaseolus vulgaris Phvul.004G059200 PTHR31683:SF29 - PECTATE LYASE 11-RELATED Chr04 + View
Phaseolus vulgaris Phvul.001G256800 PTHR31683:SF26 - PECTATE LYASE 5-RELATED Chr01 - View
Phaseolus vulgaris Phvul.009G170500 PTHR31683:SF28 - PECTATE LYASE 22-RELATED Chr09 + View
Quercus lobata QL10p005712 10 + View
Quercus lobata QL02p073510 CM012294 + View
Rhododendron simsii Rhsim12G0170900 chr12 - View
Rhododendron simsii Rhsim08G0182500 chr08 - View
Rhododendron simsii Rhsim08G0047300 chr08 + View
Striga asiatica SGA_v2.0_scaffold7G04176 scaffold7 - View
Salvia bowleyana SalBow2G0457 GWHASIU00000007 - View
Salix brachista Sabra12G0066100 GWHAAZH00000012 - View
Salix brachista Sabra15G0111000 GWHAAZH00000015 - View
Simmondsia chinensis Sc04g0001150 GWHAASQ00000004 + View
Sechium edule Sed0018395 LG01 - View
Solanum lycopersicum Solyc03g111690.4 Pectate lyase (AHRD V3.3 *** A0A2G2ZW27_CAPAN) SL4.0ch03 + View
Schrenkiella parvula Sp2g26320 PTHR31683:SF28 - PECTATE LYASE 22-RELATED ch2-4 - View
Solanum pennellii Sopen03g030810 Pectin lyase-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , AmbAllergen , Pectate lyase/Amb allergen , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein ., Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily), Pectin lyase fold Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400015230 Pectate lyase ST4.03ch03 + View
Selenicereus undatus Hund25415 Scaffold_3410 - View
Selenicereus undatus Hund05618 Scaffold_19641 - View
Trochodendron aralioides TAR374G1184 group12 - View
Trochodendron aralioides TAR629G0623 group0 + View
Theobroma cacao Thecc.02G268000 Pectate lyase family protein Chromosome_2 - View
Theobroma cacao Thecc.03G119500 Pectate lyase family protein Chromosome_3 + View
Trifolium pratense TPR.G37540 Tp57577_TGAC_v2_LG5 + View
Tripterygium wilfordii TWI39G0200 NC_052250.1 - View
Tripterygium wilfordii TWI36G0366 NC_052237.1 + View
Vaccinium macrocarpon vmacro19259 Similar to At5g63180: Probable pectate lyase 22 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro16156 Similar to At1g67750: Probable pectate lyase 5 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro16694 Similar to At1g67750: Probable pectate lyase 5 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro18304 Similar to At1g67750: Probable pectate lyase 5 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G0416 CM024072.1 - View
Vigna mungo VMungo1215G2160 CM024074.1 + View
Vigna mungo VMungo1383G0173 CM024070.1 - View
Vitis vinifera GSVIVG01007582001 chr17 - View
Vitis vinifera GSVIVG01003984001 chr14 + View