Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0024484 hypothetical protein POPTR_0004s153601g, partial [Populus trichocarpa] Chr4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G13400 LG-8 - View
Acer truncatum Atru.chr5.2839 chr5 + View
Actinidia chinensis Actinidia27932 Lachesis_group16 - View
Arabidopsis lyrata AL3G32400 scaffold_3 - View
Amaranthus hybridus Ah.01g019960 AmaHy_arrow1_Scaffold_1 + View
Aquilegia oxysepala Aqoxy6G00922 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.S0HKZV PTHR32093:SF23 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED arahy.Tifrunner.gnm1.Arahy.10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IM92EC PTHR32093:SF23 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED arahy.Tifrunner.gnm1.Arahy.20 + View
Arabidopsis thaliana AT2G15880 Leucine-rich repeat (LRR) family protein Leucine-rich repeat (LRR) family protein%3B FUNCTIONS IN: structural constituent of cell wall%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611)%3B BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G33970.1)%3B Has 436796 Blast hits to 106000 proteins in 3186 species: Archae - 830%3B Bacteria - 85977%3B Metazoa - 139472%3B Fungi - 51372%3B Plants - 100247%3B Viruses - 9779%3B Other Eukaryotes - 49119 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT1G49490 Leucine-rich repeat (LRR) family protein Leucine-rich repeat (LRR) family protein%3B FUNCTIONS IN: structural constituent of cell wall%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain%2C type 2 (InterPro:IPR013210)%2C Leucine-rich repeat (InterPro:IPR001611)%3B BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G19020.1)%3B Has 490010 Blast hits to 170242 proteins in 4186 species: Archae - 1140%3B Bacteria - 94180%3B Metazoa - 157463%3B Fungi - 74619%3B Plants - 89182%3B Viruses - 10398%3B Other Eukaryotes - 63028 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT3G19020 Leucine-rich repeat (LRR) family protein Leucine-rich repeat (LRR) family protein%3B FUNCTIONS IN: structural constituent of cell wall%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain%2C type 2 (InterPro:IPR013210)%3B BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G49490.1)%3B Has 706755 Blast hits to 161426 proteins in 4337 species: Archae - 1652%3B Bacteria - 156223%3B Metazoa - 226544%3B Fungi - 92124%3B Plants - 115331%3B Viruses - 14004%3B Other Eukaryotes - 100877 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB08g34615 ChrB08 - View
Brassica carinata BcaC01g03049 ChrC01 + View
Brassica napus C08p04080 C08 + View
Brassica napus C03p50010 C03 - View
Brassica napus A03p40960 A03 - View
Brassica napus A07p04910 A07 + View
Brassica oleracea BolC1t04469H C1 + View
Brassica rapa BraA07t28282Z A07 + View
Brassica rapa BraA03t13254Z A03 - View
Beta vulgaris EL10Ac9g21804 PTHR32093//PTHR32093:SF23 - FAMILY NOT NAMED // LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED Chr9_EL10_PGA_scaffold8 + View
Capsicum annuum CAN.G322.74 PGAv.1.6.scaffold322 - View
Cannabis sativa CANSAT25G2197 NC_044370.1 + View
Cicer arietinum L. Ca_12467_v3 Ca_LG4_v3 - View
Corylus avellana Haze_02470 Similar to PEX1: Pollen-specific leucine-rich repeat extensin-like protein 1 (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc02_g18300 Hypothetical protein chr2 + View
Carpinus fangiana Cfa018485 Cfa07 + View
Cardamine hirsuta CARHR039510 Leucine-rich repeat receptor-like protein kinase family protein Chr1 - View
Cardamine hirsuta CARHR106210 Leucine-rich repeat receptor-like protein kinase family protein Chr3 - View
Cardamine hirsuta CARHR094440 Leucine-rich repeat receptor-like protein kinase family protein Chr3 - View
Carya illinoinensis CiPaw.06G139600 Chr06 - View
Carica papaya Cpa.g.sc62.72 supercontig_62 - View
Chenopodium quinoa AUR62011412 PEX4: Pollen-specific leucine-rich repeat extensin-like protein 4 C_Quinoa_Scaffold_3333 + View
Chenopodium quinoa AUR62016647 PEX1: Pollen-specific leucine-rich repeat extensin-like protein 1 C_Quinoa_Scaffold_3670 - View
Capsella rubella Carub.0003s1885 scaffold_3 - View
Daucus carota DCAR_029012 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_022072 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv23602 GWHABJS00000005 - View
Durio zibethinus Duzib132G0639 NW_019167915.1 + View
Durio zibethinus Duzib052G0944 NW_019167849.1 - View
Erigeron canadensis ECA240G0608 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA234G2773 Conyza_canadensis_scaffold:4 - View
Erythranthe guttata Migut.N01209 scaffold_14 - View
Erythranthe guttata Migut.B00298 scaffold_2 + View
Eutrema salsugineum Thhalv10023190m.g PTHR32093:SF23 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED scaffold_11 + View
Fragaria x ananassa FAN27G2765 PTHR32093:SF23 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED Fvb2-1 + View
Fragaria x ananassa FAN15G1361 PTHR32093:SF23 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED Fvb2-4 + View
Fragaria x ananassa FAN24G0833 PTHR32093:SF23 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED Fvb2-2 + View
Fragaria vesca FvH4_2g07100 PTHR32093//PTHR32093:SF23 - FAMILY NOT NAMED // LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED Fvb2 - View
Gossypium hirsutum Gohir.D12G026400 PF00560 - Leucine Rich Repeat (LRR_1) D12 - View
Gossypium hirsutum Gohir.A04G121501 A04 - View
Gossypium hirsutum Gohir.A13G037200 PF13855 - Leucine rich repeat (LRR_8) A13 + View
Glycine max Glyma.20G008900 PTHR32093:SF23 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED Gm20 + View
Gossypium raimondii Gorai.008G026700 Chr08 - View
Gossypium raimondii Gorai.012G150700 Chr12 - View
Lupinus albus Lalb_Chr10g0095401 PTHR32093:SF23 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED Lalb_Chr10 + View
Lotus japonicus Lj2g0011897 PTHR32093//PTHR32093:SF23 - FAMILY NOT NAMED // LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED chr2 - View
Lonicera japonica Lj9P364T38 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_9_109041 PF00560//PF08263 - Leucine Rich Repeat (LRR_1) // Leucine rich repeat N-terminal domain (LRRNT_2) Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_5_117540 PTHR32093:SF23 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED Lsat_1_v8_lg_5 - View
Magnolia biondii MBI16_g19893_MAGBIO AED:0.15 Chr16 - View
Magnolia biondii MBI16_g31475_MAGBIO AED:0.13 Chr16 - View
Malus domestica MD10G1087900 Leucine-rich repeat (LRR) family protein Chr10 + View
Malus domestica MD05G1073600 Leucine-rich repeat (LRR) family protein Chr05 + View
Medicago truncatula Medtr1g034180 pollen-specific LRR extensin-like protein chr1 - View
Nicotiana tabacum Nitab4.5_0001401g0080 Leucine-rich repeat, Pistil-specific extensin-like protein Nitab4.5_0001401 - View
Olea europaea Oeu007244.1 chr3 - View
Olea europaea Oeu057668.1 chr5 + View
Petunia axillaris Peaxi162Scf00016g00136 Leucine-rich repeat (LRR) family protein Peaxi162Scf00016 + View
Petunia axillaris Peaxi162Scf00003g00203 leucine-rich repeat/extensin 1 Peaxi162Scf00003 - View
Punica granatum PGR142G2671 NC_045128.1 + View
Punica granatum PGR042G0643 NC_045130.1 + View
Punica granatum PGR142G3229 NC_045128.1 + View
Prunus persica Prupe.8G113900 Pp08 + View
Pisum sativum Psat6g096440 Leucine-rich repeat chr6LG2 - View
Papaver somniferum PSO675G0728 NC_039358.1 - View
Papaver somniferum PSO541G2295 NC_039363.1 + View
Populus trichocarpa Potri.004G146350 PF13855 - Leucine rich repeat (LRR_8) Chr04 - View
Populus trichocarpa Potri.009G108100 PF13855 - Leucine rich repeat (LRR_8) Chr09 - View
Phaseolus vulgaris Phvul.003G011500 Chr03 + View
Quercus lobata QL11p040309 11 - View
Quercus lobata QL11p039023 11 - View
Rosa chinensis RcHm_v2.0_Chr6g0259591 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim05G0079500 chr05 + View
Rhododendron simsii Rhsim11G0169900 chr11 - View
Striga asiatica SGA_v2.0_scaffold58G20599 scaffold58 + View
Striga asiatica SGA_v2.0_scaffold55G19829 scaffold55 + View
Salix brachista Sabra04G0096800 GWHAAZH00000004 - View
Solanum lycopersicum Solyc10g050470.3 Leucine-rich repeat (AHRD V3.3 *-* A0A200R9L9_9MAGN) SL4.0ch10 + View
Solanum lycopersicum Solyc01g108900.4 pollen leucine rich repeat domain-extensin SL4.0ch01 - View
Schrenkiella parvula Sp3g17120 ch3-1 - View
Solanum pennellii Sopen10g022120 Leucine-rich repeat (LRR) family protein | FUNCTIONS IN: structural constituent of cell wall | LOCATED IN: endomembrane system | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 | BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein Spenn-ch10 + View
Solanum pennellii Sopen01g051100 Leucine-rich repeat (LRR) family protein | FUNCTIONS IN: structural constituent of cell wall | LOCATED IN: endomembrane system | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Leucine-rich repeat | BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400025926 Extensin ST4.03ch01 - View
Trochodendron aralioides TAR381G0712 group11 - View
Theobroma cacao Thecc.02G093700 Leucine-rich repeat family protein Chromosome_2 + View
Theobroma cacao Thecc.08G016500 Leucine-rich repeat family protein Chromosome_8 - View
Tarenaya hassleriana THA.LOC104807345 pollen-specific leucine-rich repeat extensin-like protein 3 NW_010963495.1 + View
Tarenaya hassleriana THA.LOC104803446 pollen-specific leucine-rich repeat extensin-like protein 1 NW_010971205.1 + View
Tripterygium wilfordii TWI31G1010 NC_052233.1 + View
Tripterygium wilfordii TWI79G1237 NC_052238.1 + View
Tripterygium wilfordii TWI75G1358 NC_052253.1 + View
Vitis vinifera GSVIVG01031843001 chr3 - View