Gene: AT3G19020
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G19020
- Transcript Identifier AT3G19020.1
- Gene Type Coding gene
- Location Chr3 : 6559174-6562044 : negative
Gene Family Information
- ID HOM05D000546
- #Genes/#Species 1000/94
- Phylogenetic origin
- ID ORTHO05D000398
- #Genes/#Species 998/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G19020.1
- uniprot Q9LJ64
Descriptions
- Description Leucine-rich repeat (LRR) family protein
- Computational description Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT1G49490.1); Has 706755 Blast hits to 161426 proteins in 4337 species: Archae - 1652; Bacteria - 156223; Metazoa - 226544; Fungi - 92124; Plants - 115331; Viruses - 14004; Other Eukaryotes - 100877 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009860 | IGI | Gene Ontology | pollen tube growth | 1 |
| GO:0071555 | IEA | GOA Database | cell wall organization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005199 | ISS | Gene Ontology | structural constituent of cell wall | 2 |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000546 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005618 | IEA | GOA Database | cell wall | |
| GO:0005576 | IEA | GOA Database | extracellular region |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032675 | Leucine-rich repeat domain superfamily |
| Mapman id | Description |
|---|---|
| 21.4.1.3.2 | Cell wall organisation.cell wall proteins.hydroxyproline-rich glycoprotein activities.extensin activities.LRR-domain extensin |