Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0016287 unnamed protein product [Coffea canephora] Chr14 - View
CSS0041281 unnamed protein product [Coffea canephora] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G8070 LG-3 - View
Acer truncatum Atru.chr9.1461 chr9 - View
Acer truncatum Atru.chr5.314 chr5 - View
Acer truncatum Atru.chr1.634 chr1 + View
Actinidia chinensis Actinidia31793 Lachesis_group21 + View
Actinidia chinensis Actinidia02076 Lachesis_group23 + View
Actinidia chinensis Actinidia03084 Lachesis_group3 + View
Actinidia chinensis Actinidia14475 Lachesis_group6 + View
Arabidopsis lyrata AL7G27810 scaffold_7 - View
Avicennia marina MSTRG.8802 ScioBoG_11560_HRSCAF_11609 + View
Amaranthus hybridus Ah.07g208260 AT-hook motif nuclear-localized protein 3 AmaHy_arrow1_Scaffold_7 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.M4KLL8 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZI4JU1 PTHR31500//PTHR31500:SF15 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN arahy.Tifrunner.gnm1.Arahy.02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KT6X0G PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT4G25320 AT hook motif DNA-binding family protein AT hook motif DNA-binding family protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175)%2C AT hook%2C DNA-binding motif (InterPro:IPR017956)%3B BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT5G51590.1)%3B Has 750 Blast hits to 746 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 748%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT5G51590 AT hook motif DNA-binding family protein AT hook motif DNA-binding family protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175)%2C AT hook%2C DNA-binding motif (InterPro:IPR017956)%3B BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT4G25320.1)%3B Has 1243 Blast hits to 1178 proteins in 110 species: Archae - 0%3B Bacteria - 11%3B Metazoa - 305%3B Fungi - 62%3B Plants - 787%3B Viruses - 15%3B Other Eukaryotes - 63 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC04g20654 ChrC04 + View
Brassica carinata BcaB08g35511 ChrB08 - View
Brassica carinata BcaC01g06132 ChrC01 - View
Brassica napus C01p20850 C01 + View
Brassica napus A01p16620 A01 + View
Brassica napus A10p09530 A10 - View
Brassica napus C02p62060 C02 + View
Brassica napus A02p12220 A02 + View
Brassica napus C09p40950 C09 - View
Brassica oleracea BolC1t02012H C1 + View
Brassica oleracea BolC9t56975H C9 - View
Brassica rapa BraA03t14661Z A03 + View
Brassica rapa BraA02t09149Z A02 + View
Brassica rapa BraA02t06286Z A02 + View
Brassica rapa BraA10t43028Z A10 - View
Beta vulgaris EL10Ac3g05794 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr3_EL10_PGA_scaffold7 + View
Corylus avellana Haze_16821 Similar to AHL1: AT-hook motif nuclear-localized protein 1 (Arabidopsis thaliana OX%3D3702) 11 - View
Corylus avellana Haze_13821 Similar to AHL3: AT-hook motif nuclear-localized protein 3 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc08_g13420 AT-hook motif nuclear-localized protein 1 chr8 - View
Coffea canephora Cc02_g03900 Putative uncharacterized protein chr2 + View
Citrus clementina Ciclev10021116m.g scaffold_3 + View
Citrus clementina Ciclev10005312m.g scaffold_9 - View
Ceratophyllum demersum CDE09G0729 7 + View
Ceratophyllum demersum CDE12G0051 10 + View
Carpinus fangiana Cfa008234 Cfa03 + View
Carpinus fangiana Cfa001714 Cfa01 + View
Cardamine hirsuta CARHR232730 AT hook motif DNA-binding family protein Chr7 + View
Carya illinoinensis CiPaw.02G167200 PTHR31500//PTHR31500:SF15 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Chr02 + View
Carya illinoinensis CiPaw.04G063600 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr04 + View
Carya illinoinensis CiPaw.11G146100 PTHR31500//PTHR31500:SF7 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr11 + View
Carya illinoinensis CiPaw.03G097300 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr03 + View
Citrullus lanatus ClCG05G007480 AT hook motif DNA-binding family protein LENGTH=404 CG_Chr05 - View
Citrullus lanatus ClCG01G005100 AT hook motif DNA-binding family protein LENGTH=404 CG_Chr01 + View
Citrullus lanatus ClCG01G003540 AT hook motif DNA-binding family protein CG_Chr01 + View
Cucumis melo MELO3C005590.2 AT-hook motif nuclear-localized protein 1 chr09 - View
Cucumis melo MELO3C006833.2 AT-hook motif nuclear-localized protein 1 chr06 - View
Corchorus olitorius COL.COLO4_14180 hypothetical protein AWUE01015387.1 - View
Carica papaya Cpa.g.sc3.271 supercontig_3 + View
Capsella rubella Carub.0007s1569 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED scaffold_7 - View
Capsella rubella Carub.0008s1163 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED scaffold_8 - View
Cucumis sativus L. CsaV3_5G003650 AT-hook motif nuclear-localized protein chr5 + View
Cucumis sativus L. CsaV3_3G016340 AT-hook motif nuclear-localized protein 4 chr3 - View
Daucus carota DCAR_014612 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_020220 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_006867 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv32381 GWHABJS00000020 - View
Davidia involucrata Dinv39066 GWHABJS00000003 + View
Davidia involucrata Dinv43714 GWHABJS00000016 - View
Davidia involucrata Dinv28534 GWHABJS00000004 + View
Davidia involucrata Dinv37751 GWHABJS00000017 + View
Durio zibethinus Duzib205G0980 NW_019168381.1 - View
Durio zibethinus Duzib133G1460 NW_019167938.1 - View
Durio zibethinus Duzib068G0799 NW_019167838.1 - View
Durio zibethinus Duzib084G0045 NW_019167827.1 + View
Durio zibethinus Duzib205G0831 NW_019168381.1 - View
Durio zibethinus Duzib138G0464 NW_019167893.1 - View
Durio zibethinus Duzib068G1173 NW_019167838.1 + View
Erigeron canadensis ECA232G4521 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA238G0001 Conyza_canadensis_scaffold:6 - View
Erythranthe guttata Migut.F00431 scaffold_6 + View
Eutrema salsugineum Thhalv10013637m.g PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED scaffold_2 + View
Eutrema salsugineum Thhalv10025390m.g PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED scaffold_1 - View
Fragaria x ananassa FAN04G0410 PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb5-4 - View
Fragaria x ananassa FAN13G0741 PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb5-2 - View
Fragaria x ananassa FAN06G1294 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb7-2 + View
Fragaria x ananassa FAN03G1116 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb7-3 + View
Fragaria x ananassa FAN01G1569 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb7-4 + View
Fragaria x ananassa FAN06G4740 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb7-2 - View
Fragaria x ananassa FAN10G3143 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb7-1 - View
Fragaria vesca FvH4_5g00860 PTHR31500//PTHR31500:SF7 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb5 - View
Fragaria vesca FvH4_7g28180 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Fvb7 - View
Gossypium hirsutum Gohir.D08G155300 PTHR31500//PTHR31500:SF15 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN D08 + View
Gossypium hirsutum Gohir.A07G039366 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED A07 + View
Gossypium hirsutum Gohir.D07G043550 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED D07 + View
Gossypium hirsutum Gohir.D08G193400 PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED D08 - View
Gossypium hirsutum Gohir.D11G085500 PTHR31500//PTHR31500:SF15 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN D11 - View
Gossypium hirsutum Gohir.A11G081000 PTHR31500//PTHR31500:SF15 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN A11 - View
Gossypium hirsutum Gohir.D03G158500 PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED D03 - View
Gossypium hirsutum Gohir.A12G264100 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED A12 + View
Gossypium hirsutum Gohir.A08G174800 PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED A08 - View
Gossypium hirsutum Gohir.D12G264300 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED D12 + View
Glycine max Glyma.16G204400 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Gm16 + View
Gossypium raimondii Gorai.008G283600 Chr08 + View
Gossypium raimondii Gorai.007G091400 Chr07 - View
Gossypium raimondii Gorai.004G203700 Chr04 - View
Lupinus albus Lalb_Chr03g0033101 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Lalb_Chr03 + View
Lupinus albus Lalb_Chr19g0131311 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Lalb_Chr19 + View
Lonicera japonica Lj8A36T69 GWHAAZE00000008 + View
Lonicera japonica Lj1A984T86 GWHAAZE00000001 - View
Magnolia biondii MBI04_g45971_MAGBIO AED:0.57 Chr04 - View
Magnolia biondii MBI12_g10750_MAGBIO AED:0.16 Chr12 - View
Malus domestica MD01G1185700 AT-hook motif nuclear-localized protein 1 Chr01 - View
Malus domestica MD07G1257800 AT hook motif DNA-binding family protein Chr07 - View
Manihot esculenta Manes.02G032537 Chromosome02 + View
Manihot esculenta Manes.06G138000 Chromosome06 - View
Manihot esculenta Manes.01G071800 Chromosome01 + View
Manihot esculenta Manes.05G044900 Chromosome05 + View
Medicago truncatula Medtr5g011590 DNA-binding protein chr5 + View
Nelumbo nucifera Nn1g01217 chr1 + View
Nelumbo nucifera Nn4g26414 chr4 - View
Nicotiana tabacum Nitab4.5_0000457g0320 Domain of unknown function DUF296, AT hook, DNA-binding motif Nitab4.5_0000457 - View
Olea europaea Oeu042584.1 chr12 - View
Olea europaea Oeu028174.1 chr1 + View
Olea europaea Oeu022505.1 chr1 - View
Petunia axillaris Peaxi162Scf01372g00041 AT hook motif DNA-binding family protein Peaxi162Scf01372 - View
Punica granatum PGR031G3968 NC_045127.1 - View
Punica granatum PGR142G3083 NC_045128.1 + View
Punica granatum PGR042G1254 NC_045130.1 - View
Punica granatum PGR042G2647 NC_045130.1 + View
Prunus persica Prupe.2G282300 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Pp02 - View
Prunus persica Prupe.5G081500 PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Pp05 - View
Papaver somniferum PSO675G9086 NC_039358.1 - View
Populus trichocarpa Potri.012G129500 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr12 - View
Populus trichocarpa Potri.003G116500 PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr03 - View
Populus trichocarpa Potri.014G070000 PTHR31500//PTHR31500:SF15 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Chr14 - View
Populus trichocarpa Potri.002G148600 PTHR31500//PTHR31500:SF15 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Chr02 - View
Phaseolus vulgaris Phvul.004G127200 PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Chr04 + View
Quercus lobata QL12p039461 12 - View
Quercus lobata QL12p015380 12 - View
Rosa chinensis RcHm_v2.0_Chr1g0375131 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim09G0193800 chr09 + View
Striga asiatica SGA_v2.0_scaffold486G52382 scaffold486 + View
Striga asiatica SGA_v2.0_scaffold2G01138 scaffold2 + View
Striga asiatica SGA_v2.0_scaffold153G37016 scaffold153 - View
Salvia bowleyana SalBow4G1687 GWHASIU00000008 + View
Salvia bowleyana SalBow4G0559 GWHASIU00000008 + View
Salix brachista Sabra03G0081000 GWHAAZH00000003 - View
Salix brachista Sabra15G0144400 GWHAAZH00000015 - View
Salix brachista Sabra02G0115800 GWHAAZH00000002 - View
Salix brachista Sabra14G0049600 GWHAAZH00000014 - View
Salix brachista Sabra12G0097400 GWHAAZH00000012 - View
Simmondsia chinensis Sc25g0000180 GWHAASQ00000025 + View
Simmondsia chinensis Sc22g0000520 GWHAASQ00000022 + View
Sechium edule Sed0005821 LG01 - View
Sechium edule Sed0002526 LG01 + View
Sechium edule Sed0023341 LG13 - View
Schrenkiella parvula Sp6g13830 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED ch6-6 - View
Schrenkiella parvula Sp7g23340 PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED ch7-4 + View
Solanum pennellii Sopen08g027990 AT-hook motif nuclear-localized protein 1 (AHL1) | FUNCTIONS IN: DNA binding | LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 , AT hook, DNA-binding motif | BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein Spenn-ch08 - View
Solanum pennellii Sopen01g037120 AT-hook motif nuclear-localized protein 1 (AHL1) | FUNCTIONS IN: DNA binding | LOCATED IN: mitochondrion, nucleolus, nucleus, cytoplasm | EXPRESSED IN: 9 plant structures | EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 , AT hook, DNA-binding motif | BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG401031022 AT-hook motif nuclear localized protein 1 ST4.03ch03 - View
Solanum tuberosum PGSC0003DMG400003925 DNA binding protein ST4.03ch08 - View
Selenicereus undatus Hund11795 Scaffold_33679 + View
Selenicereus undatus Hund04636 Scaffold_19641 - View
Trochodendron aralioides TAR375G1054 group15 - View
Trochodendron aralioides TAR374G1224 group12 - View
Theobroma cacao Thecc.03G161500 Chromosome_3 - View
Theobroma cacao Thecc.03G263500 AT-hook motif nuclear-localized protein 1 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104825071 AT-hook motif nuclear-localized protein 4-like NW_010966986.1 - View
Tarenaya hassleriana THA.LOC104811510 AT-hook motif nuclear-localized protein 3 NW_010965372.1 + View
Tripterygium wilfordii TWI39G0162 NC_052250.1 - View
Tripterygium wilfordii TWI59G0397 NC_052248.1 - View
Tripterygium wilfordii TWI23G1161 NC_052239.1 + View
Tripterygium wilfordii TWI14G1338 NC_052249.1 - View
Vaccinium macrocarpon vmacro06758 Protein of unknown function chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro09884 Similar to AHL1: AT-hook motif nuclear-localized protein 1 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0464G1432 CM024077.1 + View
Vigna mungo VMungo0251G1406 CM024069.1 - View
Vitis vinifera GSVIVG01018513001 chr16 - View
Vitis vinifera GSVIVG01027617001 chr15 + View