Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0031183 PREDICTED: homeobox protein knotted-1-like 6 [Vitis vinifera] Chr6 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G7400 LG-7 - View
Aethionema arabicum Aa31LG4G10440 LG-4 - View
Acer truncatum Atru.chr9.2512 chr9 + View
Acer truncatum Atru.chr11.2075 chr11 + View
Actinidia chinensis Actinidia15069 Lachesis_group12 + View
Actinidia chinensis Actinidia19332 Lachesis_group1 - View
Actinidia chinensis Actinidia27796 Lachesis_group10 - View
Actinidia chinensis Actinidia13491 Lachesis_group16 - View
Actinidia chinensis Actinidia33080 Lachesis_group13 + View
Actinidia chinensis Actinidia08147 Lachesis_group15 + View
Arabidopsis lyrata AL2G29900 scaffold_2 + View
Arabidopsis lyrata AL1G37170 scaffold_1 - View
Avicennia marina MSTRG.2406 ScioBoG_102834_HRSCAF_103055 + View
Avicennia marina MSTRG.7913 ScioBoG_102841_HRSCAF_103114 + View
Avicennia marina MSTRG.13356 ScioBoG_18778_HRSCAF_18863 - View
Avicennia marina MSTRG.580 ScioBoG_102831_HRSCAF_103044 - View
Amaranthus hybridus Ah.02g130120 Homeobox protein knotted-1-like 6 (Protein KNAT6) AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy3G02863 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.V2YWYI PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F9ETHR PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.B0V7RI PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EDBH1H PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT1G70510 homeobox knotted-like protein A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition%2C KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings%2C while in mature plants the gene is primarily expressed in flowers and inflorescence stems. KNOTTED-like from Arabidopsis thaliana 2 (KNAT2)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: response to ethylene stimulus%2C cytokinin mediated signaling pathway%2C specification of carpel identity%3B LOCATED IN: nucleus%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541)%2C ELK (InterPro:IPR005539)%2C Homeobox (InterPro:IPR001356)%2C Homeobox%2C conserved site (InterPro:IPR017970)%2C KNOX1 (InterPro:IPR005540)%2C Homeodomain-like (InterPro:IPR009057)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 6 (TAIR:AT1G23380.1)%3B Has 6101 Blast hits to 6101 proteins in 374 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1779%3B Fungi - 271%3B Plants - 3894%3B Viruses - 0%3B Other Eukaryotes - 157 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G23380 homeobox protein knotted-1-like 6 homeodomain transcription factor KNAT6%2C belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants. KNOTTED1-like homeobox gene 6 (KNAT6)%3B FUNCTIONS IN: DNA binding%2C transcription activator activity%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: meristem maintenance%3B LOCATED IN: nucleus%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 4 anthesis%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541)%2C ELK (InterPro:IPR005539)%2C Homeobox (InterPro:IPR001356)%2C KNOX1 (InterPro:IPR005540)%2C Homeobox%2C conserved site (InterPro:IPR017970)%2C Homeodomain-like (InterPro:IPR009057)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana 2 (TAIR:AT1G70510.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR1152G076 AmTr_v1.0_scaffold00085 - View
Brassica carinata BcaB07g32333 ChrB07 - View
Brassica carinata BcaB03g11937 ChrB03 - View
Brassica carinata BcaB05g24583 ChrB05 + View
Brassica carinata BcaC05g26249 ChrC05 - View
Brassica carinata BcaC03g15198 ChrC03 + View
Brassica napus C08p21880 C08 - View
Brassica napus C02p27790 C02 + View
Brassica napus C05p22630 C05 - View
Brassica napus A09p41270 A09 + View
Brassica oleracea BolC2t08824H C2 + View
Brassica oleracea BolC5t30962H C5 - View
Brassica rapa BraA09t39621Z A09 + View
Beta vulgaris EL10Ac6g13714 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Chr6_EL10_PGA_scaffold0 + View
Cicer arietinum L. Ca_04591_v3 Ca_LG2_v3 - View
Coffea canephora Cc11_g15420 Homeobox protein knotted-1-like 6 chr11 + View
Citrus clementina Ciclev10024581m.g scaffold_3 + View
Citrus clementina Ciclev10033524m.g scaffold_4 - View
Carpinus fangiana Cfa009185 Cfa03 + View
Cardamine hirsuta CARHR063720 Knotted-1 homeobox protein Chr2 + View
Cardamine hirsuta CARHR023820 Homeobox transcription factor KN4 Chr1 - View
Carya illinoinensis CiPaw.06G069700 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Chr06 + View
Carya illinoinensis CiPaw.11G023900 PTHR11850:SF99 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED Chr11 - View
Carya illinoinensis CiPaw.05G187200 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Chr05 + View
Citrullus lanatus ClCG05G025510 Homeobox transcription factor KN4 CG_Chr05 + View
Citrullus lanatus ClCG08G017820 Homeobox transcription factor KN4 CG_Chr08 - View
Cucumis melo MELO3C026289.2 homeobox protein knotted-1-like 2 chr02 + View
Cucumis melo MELO3C011979.2 homeobox protein knotted-1-like 6 chr10 + View
Cucumis melo MELO3C010678.2 homeobox protein knotted-1-like 6 chr03 - View
Corchorus olitorius COL.COLO4_24223 hypothetical protein AWUE01018461.1 + View
Carica papaya Cpa.g.sc69.80 supercontig_69 + View
Chenopodium quinoa AUR62014084 KNAT6: Homeobox protein knotted-1-like 6 C_Quinoa_Scaffold_3035 - View
Chenopodium quinoa AUR62005422 KNAT6: Homeobox protein knotted-1-like 6 C_Quinoa_Scaffold_1214 - View
Capsella rubella Carub.0002s1721 PTHR11850:SF99 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED scaffold_2 + View
Capsella rubella Carub.0001s2296 PTHR11850:SF99 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED scaffold_1 - View
Cucumis sativus L. CsaV3_2G024800 homeobox protein knotted-1-like 6 chr2 + View
Cucumis sativus L. CsaV3_5G031380 Homeobox protein knotted-1, putative chr5 - View
Daucus carota DCAR_031124 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_026531 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv38566 GWHABJS00000019 + View
Davidia involucrata Dinv15261 GWHABJS00000008 + View
Davidia involucrata Dinv24818 GWHABJS00000018 - View
Durio zibethinus Duzib268G1392 NW_019168270.1 + View
Durio zibethinus Duzib248G1681 NW_019168048.1 - View
Durio zibethinus Duzib251G0684 NW_019167971.1 + View
Erigeron canadensis ECA233G2332 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA234G0070 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.H02543 Chr08 + View
Erythranthe guttata Migut.E00181 scaffold_5 + View
Erythranthe guttata Migut.L01469 scaffold_12 + View
Eutrema salsugineum Thhalv10008711m.g PTHR11850:SF99 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED scaffold_5 + View
Eutrema salsugineum Thhalv10019501m.g PTHR11850:SF99 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED scaffold_9 - View
Fragaria x ananassa FAN08G1585 PTHR11850//PTHR11850:SF99 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED Fvb5-3 + View
Fragaria x ananassa FAN12G3605 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Fvb4-3 + View
Fragaria x ananassa FAN04G3067 PTHR11850:SF99 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED Fvb5-4 - View
Fragaria x ananassa FAN18G3721 PTHR11850//PTHR11850:SF99 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED Fvb5-1 - View
Gossypium hirsutum Gohir.A05G313500 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED A05 - View
Gossypium hirsutum Gohir.D02G160400 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED D02 - View
Gossypium hirsutum Gohir.A03G137400 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED A03 - View
Gossypium hirsutum Gohir.D05G315000 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED D05 - View
Glycine max Glyma.18G141200 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Gm18 + View
Glycine max Glyma.02G036900 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Gm02 + View
Glycine max Glyma.08G284300 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Gm08 - View
Glycine max Glyma.01G028300 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Gm01 - View
Glycine max Glyma.04G185100 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Gm04 + View
Gossypium raimondii Gorai.005G180500 Chr05 - View
Gossypium raimondii Gorai.009G336900 Chr09 - View
Helianthus annuus HanXRQChr08g0208581 Putative ELK domain; KNOX1; KNOX2; Homeobox KN domain; Homeodomain-like HanXRQChr08 - View
Helianthus annuus HanXRQChr17g0569921 Probable KNOTTED1-like homeobox gene 6 HanXRQChr17 + View
Lupinus albus Lalb_Chr16g0382101 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Lalb_Chr16 - View
Lotus japonicus Lj2g0005522 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED chr2 - View
Lonicera japonica Lj3A1055T47 GWHAAZE00000003 + View
Lonicera japonica Lj5C126T8 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_4_4840 PTHR11850:SF99 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED Lsat_1_v8_lg_4 - View
Malus domestica MD14G1177200 KNOTTED1-like homeobox gene 6 Chr14 + View
Malus domestica MD06G1171700 KNOTTED1-like homeobox gene 6 Chr06 + View
Malus domestica MD16G1097200 KNOTTED1-like homeobox gene 6 Chr16 + View
Malus domestica MD13G1095800 KNOTTED1-like homeobox gene 6 Chr13 + View
Manihot esculenta Manes.12G025600 Chromosome12 + View
Manihot esculenta Manes.06G106700 Chromosome06 + View
Manihot esculenta Manes.13G027401 Chromosome13 + View
Medicago truncatula Medtr5g033720 homeobox knotted-like protein chr5 + View
Nelumbo nucifera Nn3g16803 chr3 - View
Nelumbo nucifera Nn4g22704 chr4 - View
Nicotiana tabacum Nitab4.5_0000338g0130 Homeobox domain, ELK, Homeodomain-like, Homeobox, conserved site, Homeobox KN domain Nitab4.5_0000338 - View
Olea europaea Oeu038607.1 chr12 - View
Olea europaea Oeu001722.1 chr1 - View
Petunia axillaris Peaxi162Scf00089g01735 Homeobox protein knotted-1-like 6 Peaxi162Scf00089 - View
Punica granatum PGR119G0092 NC_045132.1 + View
Punica granatum PGR044G2671 NC_045134.1 + View
Prunus persica Prupe.5G171100 PTHR11850:SF99 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED Pp05 + View
Prunus persica Prupe.1G249600 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Pp01 - View
Papaver somniferum PSO832G3718 NC_039367.1 + View
Populus trichocarpa Potri.010G043500 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Chr10 + View
Populus trichocarpa Potri.008G188700 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Chr08 - View
Phaseolus vulgaris Phvul.009G176750 PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Chr09 - View
Phaseolus vulgaris Phvul.002G064100 Chr02 - View
Phaseolus vulgaris Phvul.003G062500 Chr03 + View
Quercus lobata QL03p059023 3 - View
Rhododendron simsii Rhsim12G0113400 chr12 - View
Rhododendron simsii Rhsim08G0174100 chr08 + View
Salvia bowleyana SalBow8G0479 GWHASIU00000004 - View
Salvia bowleyana SalBow2G1053 GWHASIU00000007 + View
Salix brachista Sabra10G0024200 GWHAAZH00000010 - View
Salix brachista Sabra08G0142900 GWHAAZH00000008 - View
Simmondsia chinensis Sc11g0001050 GWHAASQ00000011 - View
Sechium edule Sed0023815 LG04 - View
Sechium edule Sed0017114 LG06 + View
Solanum lycopersicum Solyc03g112735.1 Homeobox protein knotted-1-like 1 (AHRD V3.3 *-* A0A2G2YEI2_CAPAN) SL4.0ch03 - View
Solanum lycopersicum Solyc05g005090.4 LEU76408 knotted 3 SL4.0ch05 - View
Schrenkiella parvula Sp5g25630 PTHR11850//PTHR11850:SF99 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED ch5-6 + View
Schrenkiella parvula Sp1g20820 PTHR11850//PTHR11850:SF99 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED ch1-1 - View
Solanum pennellii Sopen05g001110 homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants. | KNOTTED1-like homeobox gene 6 (KNAT6) | FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity | INVOLVED IN: meristem maintenance | LOCATED IN: nucleus | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: KNOX2 , ELK , Homeobox , Homeobox, conserved site , KNOX1 , Homeodomain-like , Homeodomain-related | BEST Arabidopsis thaliana protein match is: KNOTTED-like from Arabidopsis thaliana 2 Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400013493 POTH1 ST4.03ch05 + View
Solanum tuberosum PGSC0003DMG400037011 Homeobox 9 ST4.03ch03 - View
Selenicereus undatus Hund06011 Scaffold_19641 + View
Selenicereus undatus Hund25375 Scaffold_3410 + View
Trochodendron aralioides TAR374G1201 group12 + View
Trochodendron aralioides TAR622G0241 group8 + View
Theobroma cacao Thecc.02G255200 KNOTTED1-like homeobox gene 6 Chromosome_2 + View
Tarenaya hassleriana THA.LOC104822155 homeobox protein knotted-1-like 6 NW_010966617.1 + View
Tarenaya hassleriana THA.LOC104822977 homeobox protein knotted-1-like 6 NW_010966822.1 + View
Tripterygium wilfordii TWI75G0738 NC_052253.1 + View
Tripterygium wilfordii TWI36G1532 NC_052237.1 - View
Vaccinium macrocarpon vmacro16219 Similar to KNAT6: Homeobox protein knotted-1-like 6 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro19404 Similar to KNAT6: Homeobox protein knotted-1-like 6 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G3457 CM024074.1 - View
Vigna mungo VMungo0251G0415 CM024069.1 - View
Vitis vinifera GSVIVG01007715001 chr17 + View
Vitis vinifera GSVIVG01013790001 chr1 - View