Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0039799 PREDICTED: vegetative cell wall protein gp1 [Vitis vinifera] Chr12 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G6120 LG-9 - View
Aethionema arabicum Aa31LG2G13360 LG-2 + View
Aethionema arabicum Aa31LG9G15270 LG-9 + View
Acer truncatum Atru.chr6.1710 chr6 + View
Actinidia chinensis Actinidia14810 Lachesis_group14 + View
Actinidia chinensis Actinidia03376 Lachesis_group23 - View
Arabidopsis lyrata AL1G46870 scaffold_1 - View
Arabidopsis lyrata AL8G11560 scaffold_8 - View
Arabidopsis lyrata AL4G31260 scaffold_4 + View
Avicennia marina MSTRG.12156 ScioBoG_17730_HRSCAF_17811 - View
Amaranthus hybridus Ah.07g200340 AmaHy_arrow1_Scaffold_7 - View
Amaranthus hybridus Ah.12g055030 Protein HAIKU1 (MPK3/6-targeted VQ-motif-containing protein 9) (VQ motif-containing protein 14) (AtVQ14) AmaHy_arrow1_Scaffold_12 - View
Aquilegia oxysepala Aqoxy3G02351 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VYGU2E PF05678 - VQ motif (VQ) arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q5RTUN PF05678 - VQ motif (VQ) arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT5G46780 VQ motif-containing protein VQ motif-containing protein%3B CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889)%3B BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G35230.1)%3B Has 4455 Blast hits to 3562 proteins in 419 species: Archae - 0%3B Bacteria - 294%3B Metazoa - 1785%3B Fungi - 574%3B Plants - 1062%3B Viruses - 216%3B Other Eukaryotes - 524 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT1G32610 hydroxyproline-rich glycoprotein family protein hydroxyproline-rich glycoprotein family protein%3B BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT2G35230.1)%3B Has 506 Blast hits to 500 proteins in 131 species: Archae - 0%3B Bacteria - 7%3B Metazoa - 178%3B Fungi - 141%3B Plants - 111%3B Viruses - 9%3B Other Eukaryotes - 60 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT2G35230 VQ motif-containing protein Contains a plant-specific VQ motif. Involved in endosperm growth and seed size determination. IKU1 is expressed in the early endosperm and its progenitor%2C the central cell.IKU1 interacts with MINI3 in the yeast two-hybrid system. IKU1%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: regulation of seed growth%2C endosperm development%3B LOCATED IN: polar nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889)%3B BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G32610.2)%3B Has 32531 Blast hits to 21168 proteins in 1133 species: Archae - 22%3B Bacteria - 2536%3B Metazoa - 15453%3B Fungi - 6059%3B Plants - 4197%3B Viruses - 550%3B Other Eukaryotes - 3714 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaC06g34348 ChrC06 - View
Brassica carinata BcaC02g11626 ChrC02 + View
Brassica carinata BcaC06g31446 ChrC06 - View
Brassica napus C04p12950 C04 - View
Brassica napus C07p30090 C07 + View
Brassica napus A05p10530 A05 - View
Brassica napus A06p45670 A06 - View
Brassica oleracea BolC4t22938H C4 - View
Brassica oleracea BolC7t43548H C7 + View
Brassica rapa BraA05t19991Z A05 - View
Brassica rapa BraA06t27436Z A06 - View
Capsicum annuum CAN.G201.29 PGAv.1.6.scaffold201 - View
Cannabis sativa CANSAT21G2072 NC_044374.1 - View
Cicer arietinum L. Ca_06078_v3 Ca_LG2_v3 - View
Corylus avellana Haze_08229 Similar to IKU1: Protein HAIKU1 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc08_g02760 Putative VQ motif-containing protein chr8 - View
Citrus clementina Ciclev10012154m.g scaffold_6 - View
Ceratophyllum demersum CDE03G0421 12 - View
Ceratophyllum demersum CDE06G0671 4 + View
Carpinus fangiana Cfa012439 Cfa05 - View
Cardamine hirsuta CARHR129400 VQ motif-containing protein Chr4 + View
Cardamine hirsuta CARHR174720 VQ motif-containing protein Chr6 - View
Carya illinoinensis CiPaw.12G063800 PF05678 - VQ motif (VQ) Chr12 - View
Carya illinoinensis CiPaw.11G093300 PF05678 - VQ motif (VQ) Chr11 - View
Citrullus lanatus ClCG10G001610 Aig1, putative CG_Chr10 + View
Cucumis melo MELO3C003409.2 VQ motif-containing protein, putative chr04 - View
Cucumis melo MELO3C013853.2 VQ motif-containing protein, putative chr06 + View
Chenopodium quinoa AUR62007291 IKU1: Protein HAIKU1 C_Quinoa_Scaffold_1971 - View
Chenopodium quinoa AUR62018716 IKU1: Protein HAIKU1 C_Quinoa_Scaffold_1817 + View
Capsella rubella Carub.0004s1693 PF05678 - VQ motif (VQ) scaffold_4 + View
Capsella rubella Carub.0008s0114 PF05678 - VQ motif (VQ) scaffold_8 - View
Capsella rubella Carub.0001s3100 scaffold_1 - View
Cucumis sativus L. CsaV3_3G049180 protein HAIKU1-like chr3 + View
Cucumis sativus L. CsaV3_3G001730 protein HAIKU1-like chr3 + View
Daucus carota DCAR_005628 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_008272 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv25215 GWHABJS00000017 - View
Davidia involucrata Dinv28957 GWHABJS00000003 - View
Durio zibethinus Duzib068G0736 NW_019167838.1 + View
Durio zibethinus Duzib205G1382 NW_019168381.1 + View
Durio zibethinus Duzib084G1376 NW_019167827.1 + View
Erigeron canadensis ECA233G6139 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.D02200 Chr04 + View
Erythranthe guttata Migut.E00932 scaffold_5 - View
Eutrema salsugineum Thhalv10001010m.g PF05678 - VQ motif (VQ) scaffold_20 + View
Eutrema salsugineum Thhalv10016759m.g PF05678 - VQ motif (VQ) scaffold_10 + View
Gossypium hirsutum Gohir.D03G171200 PF05678 - VQ motif (VQ) D03 - View
Gossypium hirsutum Gohir.A03G001100 PF05678 - VQ motif (VQ) A03 + View
Gossypium hirsutum Gohir.D09G193050 PF05678 - VQ motif (VQ) D09 - View
Glycine max Glyma.01G018700 PF05678 - VQ motif (VQ) Gm01 + View
Glycine max Glyma.01G096800 PF05678 - VQ motif (VQ) Gm01 + View
Gossypium raimondii Gorai.004G185400 Chr04 - View
Gossypium raimondii Gorai.006G216500 Chr06 - View
Gossypium raimondii Gorai.003G181800 Chr03 - View
Hydrangea macrophylla Hma1.2p1_0303F.1_g119120 Hma1.2p1_0303F.1 + View
Hydrangea macrophylla Hma1.2p1_1063F.1_g253550 Hma1.2p1_1063F.1 - View
Lupinus albus Lalb_Chr16g0381391 PF05678 - VQ motif (VQ) Lalb_Chr16 + View
Lupinus albus Lalb_Chr09g0325671 Lalb_Chr09 + View
Lupinus albus Lalb_Chr05g0216091 PF05678 - VQ motif (VQ) Lalb_Chr05 + View
Lotus japonicus Lj2g0016669 PF05678 - VQ motif (VQ) chr2 + View
Lonicera japonica Lj8C300T9 GWHAAZE00000008 - View
Magnolia biondii MBI04_g23601_MAGBIO AED:0.02 Chr04 - View
Nelumbo nucifera Nn1g08045 chr1 + View
Petunia axillaris Peaxi162Scf00460g00033 VQ motif-containing protein isoform 1 Peaxi162Scf00460 + View
Punica granatum PGR031G2163 NC_045127.1 + View
Prunus persica Prupe.5G036600 Pp05 + View
Populus trichocarpa Potri.001G142400 PF05678 - VQ motif (VQ) Chr01 + View
Populus trichocarpa Potri.003G091800 PF05678 - VQ motif (VQ) Chr03 - View
Phaseolus vulgaris Phvul.003G285600 PF05678 - VQ motif (VQ) Chr03 - View
Phaseolus vulgaris Phvul.002G141800 PF05678 - VQ motif (VQ) Chr02 + View
Quercus lobata QL12p005199 12 + View
Rosa chinensis RcHm_v2.0_Chr7g0209711 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim07G0126700 chr07 - View
Salix brachista Sabra01G0111200 GWHAAZH00000001 + View
Salix brachista Sabra03G0061400 GWHAAZH00000003 - View
Simmondsia chinensis Sc01g0007430 GWHAASQ00000001 + View
Sechium edule Sed0013007 LG04 - View
Sechium edule Sed0021104 LG01 - View
Solanum lycopersicum Solyc06g061190.1 Protein HAIKU1 (AHRD V3.3 *** A0A2G3DCE0_CAPCH) SL4.0ch06 - View
Schrenkiella parvula Sp2g11590 PF05678 - VQ motif (VQ) ch2-4 + View
Schrenkiella parvula Sp4g17450 PF05678 - VQ motif (VQ) ch4-6 + View
Solanum pennellii Sopen06g021390 hypothetical protein Spenn-ch06 - View
Solanum pennellii Sopen08g025530 Contains a plant-specific VQ motif. Involved in endosperm growth and seed size determination. IKU1 is expressed in the early endosperm and its progenitor, the central cell.IKU1 interacts with MINI3 in the yeast two-hybrid system. | VQ motif-containing protein | BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400042183 LRX2 ST4.03ch08 + View
Solanum tuberosum PGSC0003DMG400002107 LRX2 ST4.03ch06 - View
Selenicereus undatus Hund14399 Scaffold_33677 + View
Trochodendron aralioides TAR374G0127 group12 + View
Theobroma cacao Thecc.03G227900 VQ motif-containing protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104814442 protein HAIKU1-like NW_010965451.1 - View
Tarenaya hassleriana THA.LOC104806709 protein HAIKU1 NW_010962392.1 - View
Trifolium pratense TPR.G1043 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI60G1070 NC_052246.1 + View
Tripterygium wilfordii TWI15G0848 NC_052247.1 - View
Tripterygium wilfordii TWI81G0802 NC_052251.1 - View
Vaccinium macrocarpon vmacro00330 Similar to IKU1: Protein HAIKU1 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G3624 CM024069.1 + View
Vigna mungo VMungo1215G2655 CM024074.1 + View
Vitis vinifera GSVIVG01013160001 chr2 - View