Gene: AT2G35230
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G35230
- Transcript Identifier AT2G35230.1
- Gene Type Coding gene
- Location Chr2 : 14842871-14844079 : positive
Gene Family Information
- ID HOM05D002068
- #Genes/#Species 321/91
- Phylogenetic origin
- ID ORTHO05D002029
- #Genes/#Species 325/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G35230.1
- symbol IKU1
- full_name HAIKU1
- uniprot O82170
Descriptions
- Description VQ motif-containing protein
- Computational description IKU1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of seed growth, endosperm development; LOCATED IN: polar nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G32610.2); Has 32531 Blast hits to 21168 proteins in 1133 species: Archae - 22; Bacteria - 2536; Metazoa - 15453; Fungi - 6059; Plants - 4197; Viruses - 550; Other Eukaryotes - 3714 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009960 | IMP IEA | Gene Ontology | endosperm development | 1 |
| GO:0009960 | IEA | InterPro | endosperm development | |
| GO:0080113 | IMP IEA | Gene Ontology | regulation of seed growth | 2 |
| GO:0080113 | IEA | InterPro | regulation of seed growth |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0043078 | IDA | Gene Ontology | polar nucleus | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.22.2 | RNA biosynthesis.transcriptional regulation.WRKY transcription factor activity.WRKY-regulatory transcriptional co-factor (VQ) |