Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0044116 PREDICTED: laccase-7-like [Solanum lycopersicum] Chr4 + View
CSS0030904 PREDICTED: laccase-4-like [Nicotiana sylvestris] Chr4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G12140 LG-1 + View
Actinidia chinensis Actinidia23900 Lachesis_group9 + View
Actinidia chinensis Actinidia34446 Lachesis_group15 - View
Actinidia chinensis Actinidia29674 Lachesis_group22 - View
Arabidopsis lyrata AL8G35240 scaffold_8 - View
Arabidopsis lyrata AL6G11000 scaffold_6 - View
Avicennia marina MSTRG.19043 ScioBoG_25048_HRSCAF_25167 - View
Avicennia marina MSTRG.8308 ScioBoG_102841_HRSCAF_103114 + View
Avicennia marina MSTRG.5593 ScioBoG_102839_HRSCAF_103093 - View
Amaranthus hybridus Ah.08g220520 Laccase-16 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 16) (Diphenol oxidase 16) (Urishiol oxidase 16) AmaHy_arrow1_Scaffold_8 + View
Aquilegia oxysepala Aqoxy1G00768 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1YIR2K PTHR11709:SF103 - LACCASE-16 arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0ME6H4 PTHR11709:SF103 - LACCASE-16 arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PBZG4X PTHR11709:SF103 - LACCASE-16 arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H3724C PF07731//PF07732 - Multicopper oxidase (Cu-oxidase_2) // Multicopper oxidase (Cu-oxidase_3) arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.34QMY0 PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WSM0H5 PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT5G58910 laccase 16 putative laccase%2C a member of laccase family of genes (17 members in Arabidopsis). laccase 16 (LAC16)%3B FUNCTIONS IN: laccase activity%3B INVOLVED IN: oxidation reduction%2C lignin catabolic process%3B LOCATED IN: apoplast%3B EXPRESSED IN: hypocotyl%2C root%3B CONTAINS InterPro DOMAIN/s: Multicopper oxidase%2C type 3 (InterPro:IPR011707)%2C Multicopper oxidase%2C type 2 (InterPro:IPR011706)%2C Laccase (InterPro:IPR017761)%2C Cupredoxin (InterPro:IPR008972)%2C Multicopper oxidase%2C copper-binding site (InterPro:IPR002355)%2C Multicopper oxidase%2C type 1 (InterPro:IPR001117)%3B BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT2G38080.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica napus C04p21820 C04 + View
Brassica napus A05p07960 A05 - View
Brassica napus C09p51080 C09 - View
Brassica oleracea BolC9t57967H C9 - View
Brassica oleracea BolC4t23702H C4 + View
Brassica rapa BraA05t19761Z A05 - View
Brassica rapa BraA10t43696Z A10 - View
Capsicum annuum CAN.G394.105 PGAv.1.6.scaffold394 + View
Cicer arietinum L. Ca_05927_v3 Ca_LG2_v3 + View
Cicer arietinum L. Ca_05581_v3 Ca_LG2_v3 + View
Cicer arietinum L. Ca_14905_v3 Ca_LG5_v3 + View
Corylus avellana Haze_24133 Similar to LAC2: Laccase-2 (Arabidopsis thaliana OX%3D3702) 6 - View
Corylus avellana Haze_24250 Similar to IRX12: Laccase-4 (Arabidopsis thaliana OX%3D3702) 6 + View
Corylus avellana Haze_24205 Similar to LAC17: Laccase-17 (Arabidopsis thaliana OX%3D3702) 6 + View
Corylus avellana Haze_17179 Similar to LAC22: Laccase-22 (Oryza sativa subsp. japonica OX%3D39947) 11 + View
Coffea canephora Cc01_g13860 Laccase-4 chr1 + View
Coffea canephora Cc02_g06950 Laccase-4 chr2 - View
Coffea canephora Cc06_g01620 Laccase-4 chr6 - View
Citrus clementina Ciclev10028117m.g scaffold_8 + View
Ceratophyllum demersum CDE02G3309 1 + View
Carpinus fangiana Cfa001370 Cfa01 - View
Carpinus fangiana Cfa011647 Cfa04 + View
Cardamine hirsuta CARHR272850 Laccase 16 Chr8 - View
Carya illinoinensis CiPaw.02G189600 PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Chr02 + View
Carya illinoinensis CiPaw.10G154400 PTHR11709//PTHR11709:SF93 - MULTI-COPPER OXIDASE // LACCASE-10-RELATED Chr10 + View
Citrullus lanatus ClCG03G000960 Laccase, putative CG_Chr03 - View
Citrullus lanatus ClCG10G021860 Laccase family protein CG_Chr10 + View
Citrullus lanatus ClCG11G006370 Laccase CG_Chr11 - View
Citrullus lanatus ClCG04G007210 Laccase family protein CG_Chr04 - View
Cucumis melo MELO3C020569.2 Laccase chr12 - View
Cucumis melo MELO3C008274.2 Laccase chr03 + View
Carica papaya Cpa.g.sc19.218 supercontig_19 - View
Carica papaya Cpa.g.sc56.82 supercontig_56 + View
Chenopodium quinoa AUR62001689 IRX12: Laccase-4 C_Quinoa_Scaffold_2716 - View
Chenopodium quinoa AUR62012203 LAC22: Laccase-22 C_Quinoa_Scaffold_1995 + View
Chenopodium quinoa AUR62022836 LAC22: Laccase-22 C_Quinoa_Scaffold_3378 + View
Chenopodium quinoa AUR62020093 IRX12: Laccase-4 C_Quinoa_Scaffold_2465 + View
Capsella rubella Carub.0008s1955 PTHR11709:SF103 - LACCASE-16 scaffold_8 - View
Cucumis sativus L. CsaV3_6G001630 Laccase chr6 + View
Cucumis sativus L. CsaV3_1G035990 Laccase chr1 + View
Daucus carota DCAR_011786 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_005898 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_018979 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv14467 GWHABJS00000007 + View
Davidia involucrata Dinv28610 GWHABJS00000010 + View
Davidia involucrata Dinv34425 GWHABJS00000009 + View
Durio zibethinus Duzib114G0191 NW_019167926.1 - View
Durio zibethinus Duzib093G1379 NW_019167937.1 + View
Durio zibethinus Duzib106G0794 NW_019168492.1 + View
Durio zibethinus Duzib168G0409 NW_019168159.1 - View
Erigeron canadensis ECA236G1565 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA236G4716 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.J01941 Chr10 - View
Erythranthe guttata Migut.J00204 scaffold_10 - View
Eutrema salsugineum Thhalv10015593m.g PTHR11709:SF93 - LACCASE-10-RELATED scaffold_2 - View
Eutrema salsugineum Thhalv10013285m.g PTHR11709:SF103 - LACCASE-16 scaffold_2 + View
Fragaria x ananassa FAN03G1472 PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Fvb7-3 - View
Fragaria x ananassa FAN11G2868 PTHR11709//PTHR11709:SF103 - MULTI-COPPER OXIDASE // LACCASE-16 Fvb3-4 - View
Fragaria x ananassa FAN14G3325 PTHR11709//PTHR11709:SF9 - MULTI-COPPER OXIDASE // LACCASE-7-RELATED Fvb6-1 + View
Fragaria x ananassa FAN05G3478 PTHR11709:SF9 - LACCASE-7-RELATED Fvb6-3 + View
Fragaria x ananassa FAN16G3631 PTHR11709:SF103 - LACCASE-16 Fvb3-3 + View
Fragaria x ananassa FAN25G1485 PTHR11709:SF103 - LACCASE-16 Fvb3-1 - View
Fragaria x ananassa FAN06G3809 PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Fvb7-2 + View
Fragaria vesca FvH4_6g12410 PTHR11709:SF9 - LACCASE-7-RELATED Fvb6 - View
Fragaria vesca FvH4_3g38140 PTHR11709:SF103 - LACCASE-16 Fvb3 + View
Gossypium hirsutum Gohir.A03G049300 PTHR11709:SF103 - LACCASE-16 A03 + View
Gossypium hirsutum Gohir.A05G090300 PTHR11709:SF103 - LACCASE-16 A05 - View
Gossypium hirsutum Gohir.D03G118100 PTHR11709:SF103 - LACCASE-16 D03 - View
Gossypium hirsutum Gohir.D10G243200 PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED D10 - View
Gossypium hirsutum Gohir.A04G086400 PTHR11709:SF9 - LACCASE-7-RELATED A04 + View
Gossypium hirsutum Gohir.D05G091300 PTHR11709:SF103 - LACCASE-16 D05 - View
Gossypium hirsutum Gohir.D01G215300 PTHR11709:SF93 - LACCASE-10-RELATED D01 + View
Gossypium hirsutum Gohir.D04G126500 PTHR11709:SF9 - LACCASE-7-RELATED D04 + View
Glycine max Glyma.18G197400 PTHR11709:SF103 - LACCASE-16 Gm18 + View
Glycine max Glyma.18G065100 PTHR11709:SF103 - LACCASE-16 Gm18 + View
Glycine max Glyma.18G193200 PTHR11709:SF9 - LACCASE-7-RELATED Gm18 + View
Glycine max Glyma.02G224800 PTHR11709:SF103 - LACCASE-16 Gm02 + View
Glycine max Glyma.14G191500 PTHR11709:SF103 - LACCASE-16 Gm14 + View
Glycine max Glyma.14G062300 PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Gm14 - View
Glycine max Glyma.07G142400 PTHR11709:SF9 - LACCASE-7-RELATED Gm07 + View
Gossypium raimondii Gorai.003G124600 Chr03 - View
Gossypium raimondii Gorai.009G093800 Chr09 - View
Hydrangea macrophylla Hma1.2p1_0227F.1_g096270 Hma1.2p1_0227F.1 + View
Lupinus albus Lalb_Chr10g0105001 PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Lalb_Chr10 + View
Lupinus albus Lalb_Chr15g0082701 PTHR11709//PTHR11709:SF103 - MULTI-COPPER OXIDASE // LACCASE-16 Lalb_Chr15 + View
Lupinus albus Lalb_Chr10g0103221 PTHR11709//PTHR11709:SF103 - MULTI-COPPER OXIDASE // LACCASE-16 Lalb_Chr10 + View
Lotus japonicus Lj6g0004839 PTHR11709:SF103 - LACCASE-16 chr6 - View
Lotus japonicus LjContig00155g0007885 PTHR11709//PTHR11709:SF103 - MULTI-COPPER OXIDASE // LACCASE-16 Contig00155 - View
Lonicera japonica Lj2C1077T5 GWHAAZE00000002 + View
Lonicera japonica Lj1A950T55 GWHAAZE00000001 + View
Lonicera japonica Lj3A956T50 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_8_71281 PTHR11709:SF103 - LACCASE-16 Lsat_1_v8_lg_8 - View
Malus domestica MD12G1156900 laccase 7 Chr12 + View
Malus domestica MD04G1142300 laccase 7 Chr04 + View
Malus domestica MD11G1080900 Laccase/Diphenol oxidase family protein Chr11 - View
Malus domestica MD07G1213300 Laccase/Diphenol oxidase family protein Chr07 + View
Malus domestica MD03G1076400 Laccase/Diphenol oxidase family protein Chr03 - View
Malus domestica MD01G1146500 Laccase/Diphenol oxidase family protein Chr01 + View
Manihot esculenta Manes.01G164900 Chromosome01 - View
Manihot esculenta Manes.02G122300 Chromosome02 - View
Manihot esculenta Manes.09G102600 Chromosome09 + View
Manihot esculenta Manes.07G125000 Chromosome07 + View
Medicago truncatula Medtr3g462760 laccase/diphenol oxidase family protein chr3 + View
Medicago truncatula Medtr5g069680 laccase/diphenol oxidase family protein chr5 + View
Nicotiana tabacum Nitab4.5_0000119g0250 Multicopper oxidase, type 3, Multicopper oxidase, type 1, Cupredoxin, Multicopper oxidase, type 2, Multicopper oxidase, copper-binding site, Laccase Nitab4.5_0000119 - View
Petunia axillaris Peaxi162Scf00014g00811 laccase 10 Peaxi162Scf00014 - View
Petunia axillaris Peaxi162Scf01058g00155 laccase 10 Peaxi162Scf01058 - View
Punica granatum PGR119G1422 NC_045132.1 + View
Punica granatum PGR142G0342 NC_045128.1 + View
Punica granatum PGR031G2277 NC_045127.1 - View
Punica granatum PGR004G1739 NC_045131.1 - View
Prunus persica Prupe.6G061300 PTHR11709:SF103 - LACCASE-16 Pp06 - View
Pisum sativum Psat2g059600 Multicopper oxidase chr2LG1 - View
Papaver somniferum PSO801G0217 NW_020628818.1 + View
Papaver somniferum PSO339G3472 NC_039366.1 - View
Populus trichocarpa Potri.009G042500 PTHR11709:SF103 - LACCASE-16 Chr09 + View
Populus trichocarpa Potri.010G193100 PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Chr10 - View
Populus trichocarpa Potri.008G064000 PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Chr08 + View
Populus trichocarpa Potri.001G248700 PTHR11709:SF103 - LACCASE-16 Chr01 + View
Phaseolus vulgaris Phvul.008G112100 PTHR11709:SF9 - LACCASE-7-RELATED Chr08 - View
Phaseolus vulgaris Phvul.006G065800 PTHR11709:SF103 - LACCASE-16 Chr06 - View
Phaseolus vulgaris Phvul.008G226700 PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Chr08 - View
Phaseolus vulgaris Phvul.008G107100 PTHR11709:SF103 - LACCASE-16 Chr08 - View
Phaseolus vulgaris Phvul.008G263100 PTHR11709:SF103 - LACCASE-16 Chr08 - View
Quercus lobata QL07p027603 7 - View
Quercus lobata QL01p026960 1 - View
Rosa chinensis RcHm_v2.0_Chr5g0068571 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim01G0234800 chr01 + View
Rhododendron simsii Rhsim05G0201500 chr05 + View
Salvia bowleyana SalBow2G0804 GWHASIU00000007 - View
Salix brachista Sabra16G0150800 GWHAAZH00000016 + View
Salix brachista Sabra08G0047100 GWHAAZH00000008 + View
Salix brachista Sabra10G0148700 GWHAAZH00000010 - View
Salix brachista Sabra09G0030100 GWHAAZH00000009 + View
Simmondsia chinensis Sc11g0007300 GWHAASQ00000011 - View
Sechium edule Sed0014827 LG14 - View
Sechium edule Sed0025446 LG13 + View
Solanum lycopersicum Solyc06g076760.2 Laccase (AHRD V3.3 *** K4CA34_SOLLC) SL4.0ch06 + View
Solanum lycopersicum Solyc09g011960.2 Laccase (AHRD V3.3 *** K4CRM1_SOLLC) SL4.0ch09 + View
Schrenkiella parvula Sp6g20610 PTHR11709//PTHR11709:SF103 - MULTI-COPPER OXIDASE // LACCASE-16 ch6-6 - View
Schrenkiella parvula Sp6g40550 PTHR11709//PTHR11709:SF93 - MULTI-COPPER OXIDASE // LACCASE-10-RELATED ch6-6 + View
Solanum pennellii Sopen09g006750 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). | laccase 17 (LAC17) | FUNCTIONS IN: laccase activity | INVOLVED IN: oxidation reduction, lignin catabolic process | LOCATED IN: endomembrane system, apoplast | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage, LP.12 twelve leaves visible | CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 , Laccase , Multicopper oxidase, type 2 , Cupredoxin , Multicopper oxidase, copper-binding site , Multicopper oxidase, type 1 | BEST Arabidopsis thaliana protein match is: laccase 2 Spenn-ch09 + View
Solanum pennellii Sopen06g033140 Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype. | IRREGULAR XYLEM 12 (IRX12) | FUNCTIONS IN: laccase activity | INVOLVED IN: secondary cell wall biogenesis | LOCATED IN: endomembrane system, apoplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 , Laccase , Multicopper oxidase, type 2 , Cupredoxin , Multicopper oxidase, copper-binding site , Multicopper oxidase, type 1 | BEST Arabidopsis thaliana protein match is: laccase 10 Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400019185 Diphenol oxidase ST4.03ch10 - View
Solanum tuberosum PGSC0003DMG400030347 Laccase ST4.03ch06 + View
Selenicereus undatus Hund04893 Scaffold_19641 - View
Trochodendron aralioides TAR633G1721 group2 + View
Trochodendron aralioides TAR623G0131 group7 + View
Trochodendron aralioides TAR636G2719 group1 - View
Theobroma cacao Thecc.09G306200 Laccase/Diphenol oxidase family protein Chromosome_9 - View
Theobroma cacao Thecc.05G025600 Chromosome_5 - View
Tarenaya hassleriana THA.LOC104816217 laccase-10 NW_010965775.1 - View
Tarenaya hassleriana THA.LOC104810729 laccase-16 NW_010965304.1 - View
Trifolium pratense TPR.G13267 Tp57577_TGAC_v2_scaf_405 + View
Tripterygium wilfordii TWI31G1319 NC_052233.1 - View
Tripterygium wilfordii TWI74G1347 NC_052234.1 - View
Tripterygium wilfordii TWI77G0563 NC_052236.1 - View
Tripterygium wilfordii TWI73G0906 NC_052232.1 + View
Tripterygium wilfordii TWI79G1081 NC_052238.1 - View
Vaccinium macrocarpon vmacro14578 Similar to IRX12: Laccase-4 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro06999 Similar to IRX12: Laccase-4 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro20210 Similar to LAC7: Laccase-7 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G0279 CM024073.1 + View
Vigna mungo VMungo0647G0103 CM024073.1 - View
Vigna mungo VMungo0540G2127 CM024075.1 + View
Vitis vinifera GSVIVG01016372001 chr13 + View
Vitis vinifera GSVIVG01024795001 chr6 + View
Zea mays Zm00001eb147850 Zm00001e019267 3 - View