Gene: AT5G58910

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G58910
  • Transcript Identifier AT5G58910.2
  • Gene Type Coding gene
  • Location Chr5 : 23789522-23792112 : negative

Gene Family Information

  • ID HOM05D000080
  • #Genes/#Species 3730/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G58910.2
  • symbol LAC16
  • uniprot Q1PDH6

Descriptions

  • Description laccase 16
  • Computational description laccase 16 (LAC16); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: apoplast; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Laccase (InterPro:IPR017761), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT2G38080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046274
IEA
GOA Databaselignin catabolic process
GO:0046274
IEA
InterProlignin catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005507
IEA
Gene Ontologycopper ion binding
GO:0005507
IEA
InterProcopper ion binding
GO:0052716
IEA
Gene Ontologyhydroquinone:oxygen oxidoreductase activity
GO:0052716
IEA
InterProhydroquinone:oxygen oxidoreductase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IBA
Gene Ontologyoxidoreductase activity1
GO:0016491
IEA
InterProoxidoreductase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0048046
IEA
GOA Databaseapoplast
GO:0048046
IEA
InterProapoplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034288 Laccase, first cupredoxin domain
IPR045087 Multicopper oxidase
IPR001117 Multicopper oxidase, type 1
IPR008972 Cupredoxin
IPR034285 Laccase, second cupredoxin domain
IPR011707 Multicopper oxidase, N-termianl
IPR017761 Laccase
IPR034289 Laccase, third cupredoxin domain
IPR011706 Multicopper oxidase, C-terminal
Mapman id Description
21.6.2.2 Cell wall organisation.lignin.monolignol conjugation and polymerization.lignin laccase