Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G15380 LG-10 + View
Acer truncatum Atru.chr5.615 chr5 - View
Actinidia chinensis Actinidia28492 Lachesis_group23 + View
Actinidia chinensis Actinidia02806 Lachesis_group16 - View
Arabidopsis lyrata AL5G44010 scaffold_5 - View
Avicennia marina MSTRG.20884 ScioBoG_26180_HRSCAF_26306 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T01U3X K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FXC0UE arahy.Tifrunner.gnm1.Arahy.17 + View
Arabidopsis thaliana AT3G61620 3'-5'-exoribonuclease family protein exonuclease RRP41 (RRP41) RRP41%3B FUNCTIONS IN: 3'-5'-exoribonuclease activity%2C RNA binding%3B INVOLVED IN: RNA processing%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Exoribonuclease%2C phosphorolytic domain 2 (InterPro:IPR015847)%2C Exoribonuclease%2C phosphorolytic domain 1 (InterPro:IPR001247)%2C Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568)%3B BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT4G27490.1)%3B Has 12943 Blast hits to 12918 proteins in 2731 species: Archae - 406%3B Bacteria - 8580%3B Metazoa - 462%3B Fungi - 283%3B Plants - 250%3B Viruses - 0%3B Other Eukaryotes - 2962 (source: NCBI BLink). RRP41%3B FUNCTIONS IN: 3'-5'-exoribonuclease activity%2C RNA binding%3B INVOLVED IN: RNA processing%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Exoribonuclease%2C phosphorolytic domain 2 (InterPro:IPR015847)%2C Exoribonuclease%2C phosphorolytic domain 1 (InterPro:IPR001247)%2C Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568)%3B BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT4G27490.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC08g45143 ChrC08 - View
Brassica carinata BcaB02g07365 ChrB02 + View
Brassica carinata BcaC07g40663 ChrC07 + View
Brassica napus A07p25630 A07 - View
Brassica napus C06p27620 C06 - View
Brassica napus C08p36470 C08 - View
Brassica napus A09p53690 A09 - View
Brassica oleracea BolC8t51230H C8 - View
Brassica oleracea BolC6t37931H C6 - View
Brassica rapa BraA09t40791Z A09 - View
Brassica rapa BraA07t30204Z A07 - View
Beta vulgaris EL10Ac1g00318 K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) Chr1_EL10_PGA_scaffold3 + View
Capsicum annuum CAN.G986.49 PGAv.1.6.scaffold986 + View
Cannabis sativa CANSAT56G4345 NC_044371.1 - View
Cicer arietinum L. Ca_09490_v3 Ca_LG3_v3 - View
Coffea canephora Cc02_g38930 Putative Exosome complex component RRP41 chr2 - View
Ceratophyllum demersum CDE10G0765 8 + View
Ceratophyllum demersum CDE10G0991 8 + View
Cardamine hirsuta CARHR171930 Ribonuclease PH Chr5 - View
Carica papaya Cpa.g.sc194.16 supercontig_194 + View
Chenopodium quinoa AUR62004446 RRP41: Exosome complex component RRP41 homolog C_Quinoa_Scaffold_4250 - View
Chenopodium quinoa AUR62023504 RRP41: Exosome complex component RRP41 homolog C_Quinoa_Scaffold_1606 + View
Capsella rubella Carub.0005s2831 K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) scaffold_5 - View
Daucus carota DCAR_006962 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv43889 GWHABJS00000016 - View
Davidia involucrata Dinv32549 GWHABJS00000020 - View
Durio zibethinus Duzib138G1937 NW_019167893.1 - View
Erigeron canadensis ECA234G2549 Conyza_canadensis_scaffold:4 + View
Erythranthe guttata Migut.B01830 scaffold_2 - View
Eutrema salsugineum Thhalv10006211m.g K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) scaffold_19 + View
Gossypium hirsutum Gohir.A11G094100 K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) A11 - View
Gossypium hirsutum Gohir.D11G099100 K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) D11 - View
Glycine max Glyma.03G255200 PTHR11953:SF0 - EXOSOME COMPLEX COMPONENT RRP41 Gm03 - View
Glycine max Glyma.19G252800 K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) Gm19 - View
Gossypium raimondii Gorai.007G105300 Chr07 - View
Hydrangea macrophylla Hma1.2p1_0384F.1_g140990 Hma1.2p1_0384F.1 - View
Lotus japonicus Lj1g0013952 K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) chr1 + View
Lonicera japonica Lj9A592T69 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_4_33601 K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) Lsat_1_v8_lg_4 - View
Magnolia biondii MBI07_g20436_MAGBIO AED:0.69 Chr07 + View
Manihot esculenta Manes.01G249700 Chromosome01 + View
Medicago truncatula Medtr7g116920 exosome complex exonuclease RRP41 chr7 - View
Nicotiana tabacum Nitab4.5_0000305g0180 Ribosomal protein S5 domain 2-type fold, Exoribonuclease, phosphorolytic domain 2, Exoribonuclease, phosphorolytic domain 1, PNPase/RNase PH domain Nitab4.5_0000305 + View
Petunia axillaris Peaxi162Scf01012g00123 Exosome complex component RRP41 Peaxi162Scf01012 + View
Populus trichocarpa Potri.014G094300 K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) Chr14 - View
Phaseolus vulgaris Phvul.006G109900 K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) Chr06 - View
Rhododendron simsii Rhsim07G0007400 chr07 + View
Striga asiatica SGA_v2.0_scaffold5G02982 scaffold5 - View
Salvia bowleyana SalBow3G2972 GWHASIU00000006 - View
Salix brachista Sabra14G0068900 GWHAAZH00000014 - View
Simmondsia chinensis Sc01g0003000 GWHAASQ00000001 + View
Solanum lycopersicum Solyc01g095480.4 Exosome complex component Rrp41 (AHRD V3.3 *** A0A2G2YY34_CAPAN) SL4.0ch01 - View
Schrenkiella parvula Sp5g01790 K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) ch5-1 + View
Solanum pennellii Sopen01g039230 exonuclease RRP41 (RRP41) | RRP41 | FUNCTIONS IN: 3-5-exoribonuclease activity, RNA binding | INVOLVED IN: RNA processing | LOCATED IN: cellular_component unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 , Exoribonuclease, phosphorolytic domain 1 , Ribosomal protein S5 domain 2-type fold | BEST Arabidopsis thaliana protein match is: 3-5-exoribonuclease family protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400000206 Exosome complex exonuclease RRP41 ST4.03ch01 - View
Trochodendron aralioides TAR636G1595 group1 + View
Trochodendron aralioides TAR375G0239 group15 - View
Theobroma cacao Thecc.01G348200 3'-5'-exoribonuclease family protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104817331 exosome complex component RRP41 homolog NW_010965946.1 - View
Trifolium pratense TPR.G4745 Tp57577_TGAC_v2_LG6 + View
Vaccinium macrocarpon vmacro13201 Similar to RRP41: Exosome complex component RRP41 homolog (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G1292 CM024075.1 + View
Vitis vinifera GSVIVG01027043001 chr15 + View